Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p020098 Quercus lobata HOM05D000007 ORTHO05D000039 4.6e-67 257.7 124 100.0
QL08p020067 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-38 162.2 123 68.3
QL08p020054 Quercus lobata HOM05D000007 ORTHO05D000039 9.4e-36 153.7 123 65.9
QL11p003889 Quercus lobata HOM05D000007 ORTHO05D000039 8.0e-27 124.0 127 55.9
QL11p003050 Quercus lobata HOM05D000007 ORTHO05D000039 5.2e-26 121.3 126 54.8
QL08p020282 Quercus lobata HOM05D000007 ORTHO05D000039 2.9e-21 105.5 126 49.2
QL11p051030 Quercus lobata HOM05D000007 ORTHO05D000039 3.8e-21 105.1 119 51.3
QL11p051041 Quercus lobata HOM05D000007 ORTHO05D000039 8.5e-21 104.0 129 48.1
QL11p003899 Quercus lobata HOM05D000007 ORTHO05D000039 1.5e-20 103.2 124 50.0
QL08p019850 Quercus lobata HOM05D000007 ORTHO05D000039 1.9e-20 102.8 121 50.4
QL08p020302 Quercus lobata HOM05D000007 ORTHO05D000039 5.5e-20 101.3 129 48.8
QL07p003552 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-18 96.7 131 45.0
QL07p003180 Quercus lobata HOM05D000007 ORTHO05D000039 8.8e-18 94.0 121 47.1
QL07p003229 Quercus lobata HOM05D000007 ORTHO05D000039 8.8e-18 94.0 117 48.7
QL07p003134 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-17 93.6 115 45.2
QL07p003609 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-17 92.8 120 48.3
QL03p014472 Quercus lobata HOM05D000007 ORTHO05D000039 4.4e-17 91.7 115 47.8
QL04p005232 Quercus lobata HOM05D000007 ORTHO05D000039 5.7e-17 91.3 127 44.1
QL03p005929 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-16 89.7 129 43.4
QL07p003148 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-16 89.4 112 46.4
QL07p003314 Quercus lobata HOM05D000007 ORTHO05D000039 2.8e-16 89.0 118 45.8
QL04p064435 Quercus lobata HOM05D000007 ORTHO05D000039 4.8e-16 88.2 129 42.6
QL01p000757 Quercus lobata HOM05D000007 ORTHO05D000039 6.3e-16 87.8 117 46.2
QL07p003322 Quercus lobata HOM05D000007 ORTHO05D000039 6.3e-16 87.8 126 42.1
QL07p003114 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-15 87.0 115 46.1
QL03p005922 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-15 86.7 129 41.9
QL04p064442 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-15 86.7 129 41.9
QL11p000252 Quercus lobata HOM05D000007 ORTHO05D000039 3.1e-15 85.5 124 41.9
QL03p005911 Quercus lobata HOM05D000007 ORTHO05D000039 7.0e-15 84.3 122 41.8
QL07p003496 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-14 82.4 124 39.5
QL07p003540 Quercus lobata HOM05D000007 ORTHO05D000039 5.9e-14 81.3 117 46.2
QL08p020259 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-13 79.7 121 43.0
QL04p064452 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-13 79.3 101 44.6
QL03p006010 Quercus lobata HOM05D000007 ORTHO05D000039 3.8e-13 78.6 129 38.8
CSS0017530 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 8.5e-13 77.4 122 39.3
QL07p003126 Quercus lobata HOM05D000007 ORTHO05D000039 5.5e-12 74.7 72 51.4
FvH4_1g22270 Fragaria vesca HOM05D000007 ORTHO05D000039 1.6e-11 73.2 134 37.3
FAN19G1046 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.6e-11 73.2 134 37.3
Lj1P663T62 Lonicera japonica HOM05D000007 ORTHO05D000039 2.7e-11 72.4 128 34.4
QL02p059236 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-11 72.4 117 41.0
Lj1C674T8 Lonicera japonica HOM05D000007 ORTHO05D000039 3.6e-11 72.0 128 33.6
QL02p058825 Quercus lobata HOM05D000007 ORTHO05D000039 4.7e-11 71.6 117 40.2
FAN21G0203 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.1e-11 71.2 107 40.2
FAN21G3753 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.1e-11 71.2 107 40.2
Lalb_Chr02g0151161 Lupinus albus HOM05D000007 ORTHO05D000039 6.1e-11 71.2 122 37.7
Actinidia37850 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.8e-10 69.7 126 33.3
QL03p015085 Quercus lobata HOM05D000007 ORTHO05D000039 1.8e-10 69.7 108 43.5
Peaxi162Scf00384g00125 Petunia axillaris HOM05D000007 ORTHO05D000039 6.8e-10 67.8 121 29.8
PGSC0003DMG400022664 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.8e-10 67.8 129 37.2
Haze_09499 Corylus avellana HOM05D000007 ORTHO05D000039 8.8e-10 67.4 126 38.9
RcHm_v2.0_Chr2g0116451 Rosa chinensis HOM05D000007 ORTHO05D000039 8.8e-10 67.4 126 38.1
FAN11G3667 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-09 67.0 107 38.3
FAN11G3730 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-09 67.0 124 35.5
FAN16G3299 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-09 67.0 107 38.3
FAN28G1507 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-09 67.0 124 35.5
Dinv24454 Davidia involucrata HOM05D000007 ORTHO05D000039 1.5e-09 66.6 129 32.6
Prupe.5G081800 Prunus persica HOM05D000007 ORTHO05D000039 1.5e-09 66.6 113 38.9
Dinv15480 Davidia involucrata HOM05D000007 ORTHO05D000039 2.0e-09 66.2 124 32.3
FvH4_3g16840 Fragaria vesca HOM05D000007 ORTHO05D000039 2.0e-09 66.2 107 37.4
Cc05_g06390 Coffea canephora HOM05D000007 ORTHO05D000039 2.6e-09 65.9 120 33.3
Prupe.5G081900 Prunus persica HOM05D000007 ORTHO05D000039 2.6e-09 65.9 118 38.1
Sopen01g028740 Solanum pennellii HOM05D000007 ORTHO05D000017 2.6e-09 65.9 119 37.8
CSS0048184 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 4.4e-09 65.1 127 31.5
Haze_05766 Corylus avellana HOM05D000007 ORTHO05D000039 4.4e-09 65.1 132 33.3
FvH4_3g42390 Fragaria vesca HOM05D000007 ORTHO05D000039 4.4e-09 65.1 124 34.7
MD03G1028300 Malus domestica HOM05D000007 ORTHO05D000039 4.4e-09 65.1 117 35.9
Actinidia03637 Actinidia chinensis HOM05D000007 ORTHO05D000039 7.5e-09 64.3 124 33.1
Nitab4.5_0003693g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 7.5e-09 64.3 130 30.8
Nitab4.5_0005902g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 7.5e-09 64.3 119 30.3
RcHm_v2.0_Chr5g0030021 Rosa chinensis HOM05D000007 ORTHO05D000039 7.5e-09 64.3 117 35.0
Thecc.01G155200 Theobroma cacao HOM05D000007 ORTHO05D000039 7.5e-09 64.3 117 33.3
QL07p003237 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-08 63.5 74 44.6
vmacro17234 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.3e-08 63.5 120 31.7
Cfa020533 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.7e-08 63.2 127 37.0
MD09G1091100 Malus domestica HOM05D000007 ORTHO05D000039 1.7e-08 63.2 113 36.3
Prupe.4G151000 Prunus persica HOM05D000007 ORTHO05D000039 1.7e-08 63.2 125 36.0
Lj8P116T38 Lonicera japonica HOM05D000007 ORTHO05D000039 2.2e-08 62.8 129 30.2
Manes.03G115800 Manihot esculenta HOM05D000007 ORTHO05D000039 2.2e-08 62.8 117 31.6
Prupe.4G150700 Prunus persica HOM05D000007 ORTHO05D000039 2.2e-08 62.8 113 38.1
RcHm_v2.0_Chr1g0348511 Rosa chinensis HOM05D000007 ORTHO05D000039 2.2e-08 62.8 112 35.7
Solyc01g067030.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 2.2e-08 62.8 128 34.4
MD11G1031100 Malus domestica HOM05D000007 ORTHO05D000039 2.8e-08 62.4 116 33.6
RcHm_v2.0_Chr5g0031751 Rosa chinensis HOM05D000007 ORTHO05D000039 2.8e-08 62.4 112 36.6
FvH4_3g18920 Fragaria vesca HOM05D000007 ORTHO05D000039 3.7e-08 62.0 118 39.8
Peaxi162Scf00047g00814 Petunia axillaris HOM05D000007 ORTHO05D000017 3.7e-08 62.0 119 34.5
RcHm_v2.0_Chr5g0061121 Rosa chinensis HOM05D000007 ORTHO05D000039 3.7e-08 62.0 115 37.4
COL.COLO4_09452 Corchorus olitorius HOM05D000007 ORTHO05D000039 6.3e-08 61.2 130 33.8
Dinv19774 Davidia involucrata HOM05D000007 ORTHO05D000039 6.3e-08 61.2 104 38.5
Nitab4.5_0001267g0120 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.3e-08 61.2 122 29.5
vmacro13636 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 6.3e-08 61.2 120 30.8
Haze_13292 Corylus avellana HOM05D000007 ORTHO05D000039 8.3e-08 60.8 121 31.4
Dinv23704 Davidia involucrata HOM05D000007 ORTHO05D000039 8.3e-08 60.8 125 30.4
Nitab4.5_0003693g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 8.3e-08 60.8 124 29.0
Dinv21276 Davidia involucrata HOM05D000007 ORTHO05D000039 1.1e-07 60.5 122 32.0
FAN11G3242 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.1e-07 60.5 130 35.4
RcHm_v2.0_Chr5g0028051 Rosa chinensis HOM05D000007 ORTHO05D000039 1.1e-07 60.5 121 36.4
vmacro00172 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.1e-07 60.5 137 38.0
Actinidia10112 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.4e-07 60.1 114 30.7
Haze_13293 Corylus avellana HOM05D000007 ORTHO05D000039 1.4e-07 60.1 121 30.6
Nitab4.5_0000059g0510 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-07 60.1 119 29.4
Peaxi162Scf00152g00825 Petunia axillaris HOM05D000007 ORTHO05D000039 1.4e-07 60.1 122 29.5
RcHm_v2.0_Chr5g0031801 Rosa chinensis HOM05D000007 ORTHO05D000039 1.4e-07 60.1 112 34.8
Haze_13253 Corylus avellana HOM05D000007 ORTHO05D000039 1.8e-07 59.7 122 29.5
DCAR_019197 Daucus carota HOM05D000007 ORTHO05D000039 1.8e-07 59.7 124 29.0
FAN11G0403 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.8e-07 59.7 118 39.0
RcHm_v2.0_Chr5g0031771 Rosa chinensis HOM05D000007 ORTHO05D000039 1.8e-07 59.7 113 38.9
vmacro13635 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.8e-07 59.7 121 29.8
COL.COLO4_09169 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.4e-07 59.3 126 33.3
COL.COLO4_10297 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.4e-07 59.3 125 35.2
FvH4_3g18911 Fragaria vesca HOM05D000007 ORTHO05D000039 2.4e-07 59.3 114 36.8
FvH4_3g18970 Fragaria vesca HOM05D000007 ORTHO05D000039 2.4e-07 59.3 112 33.9
FvH4_5g11830 Fragaria vesca HOM05D000007 ORTHO05D000039 2.4e-07 59.3 110 32.7
FAN18G2360 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.4e-07 59.3 110 32.7
FAN18G4462 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.4e-07 59.3 110 32.7
FAN19G1395 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.4e-07 59.3 127 35.4
MBI14_g41393_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D000124 2.4e-07 59.3 110 31.8
QL04p067556 Quercus lobata HOM05D000007 ORTHO05D000039 2.4e-07 59.3 120 32.5
vmacro13634 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 2.4e-07 59.3 126 31.0
FvH4_1g22290 Fragaria vesca HOM05D000007 ORTHO05D000039 3.1e-07 58.9 127 33.1
FAN18G3215 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.1e-07 58.9 117 33.3
Hma1.2p1_2614F.1_g325400 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 3.1e-07 58.9 118 30.5
MD03G1028100 Malus domestica HOM05D000007 ORTHO05D000039 3.1e-07 58.9 112 31.2
QL04p067441 Quercus lobata HOM05D000007 ORTHO05D000039 3.1e-07 58.9 120 30.0
Actinidia11172 Actinidia chinensis HOM05D000007 ORTHO05D000039 4.1e-07 58.5 125 30.4
Haze_09500 Corylus avellana HOM05D000007 ORTHO05D000039 4.1e-07 58.5 101 32.7
FvH4_5g11823 Fragaria vesca HOM05D000007 ORTHO05D000039 4.1e-07 58.5 117 33.3
FAN21G2178 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.1e-07 58.5 113 38.1
Lj1P653T16 Lonicera japonica HOM05D000007 ORTHO05D000039 4.1e-07 58.5 123 27.6
Prupe.8G212900 Prunus persica HOM05D000007 ORTHO05D000039 4.1e-07 58.5 139 31.7
Rhsim09G0013700 Rhododendron simsii HOM05D000007 ORTHO05D000039 4.1e-07 58.5 121 29.8
Thecc.07G075500 Theobroma cacao HOM05D000007 ORTHO05D000039 4.1e-07 58.5 121 34.7
Haze_10234 Corylus avellana HOM05D000007 ORTHO05D000039 5.4e-07 58.2 118 32.2
Dinv24453 Davidia involucrata HOM05D000007 ORTHO05D000039 5.4e-07 58.2 129 30.2
FAN11G1650 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.4e-07 58.2 69 44.9
Lj1C577T3 Lonicera japonica HOM05D000007 ORTHO05D000039 5.4e-07 58.2 135 29.6
QL07p003485 Quercus lobata HOM05D000007 ORTHO05D000039 5.4e-07 58.2 73 45.2
FAN21G2720 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.0e-07 57.8 125 33.6
Prupe.8G212800 Prunus persica HOM05D000007 ORTHO05D000039 7.0e-07 57.8 139 32.4
PGSC0003DMG400046761 Solanum tuberosum HOM05D000007 ORTHO05D000039 7.0e-07 57.8 118 27.1
SGA_v2.0_scaffold67G22669 Striga asiatica HOM05D000007 ORTHO05D000017 7.0e-07 57.8 130 30.8
TWI60G0638 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 7.0e-07 57.8 124 30.6
Haze_13250 Corylus avellana HOM05D000007 ORTHO05D000039 9.2e-07 57.4 112 31.2
Hma1.2p1_0178F.1_g078430 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 9.2e-07 57.4 126 31.0
Hma1.2p1_1267F.1_g271540 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 9.2e-07 57.4 118 29.7
Cfa020532 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.2e-06 57.0 100 34.0
Haze_09506 Corylus avellana HOM05D000011 ORTHO05D000018 1.2e-06 57.0 118 33.1
Haze_25722 Corylus avellana HOM05D000007 ORTHO05D000017 1.2e-06 57.0 115 32.2
Haze_25729 Corylus avellana HOM05D000007 ORTHO05D000017 1.2e-06 57.0 115 32.2
FvH4_5g15943 Fragaria vesca HOM05D000007 ORTHO05D000039 1.2e-06 57.0 136 36.8
FAN11G2343 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-06 57.0 114 36.0
Glyma.10G199800 Glycine max HOM05D000007 ORTHO05D000039 1.2e-06 57.0 119 29.4
Lj1P652T23 Lonicera japonica HOM05D000007 ORTHO05D000039 1.2e-06 57.0 125 31.2
PSO541G0244 Papaver somniferum HOM05D000007 ORTHO05D000017 1.2e-06 57.0 114 34.2
vmacro19864 Vaccinium macrocarpon HOM05D001759 ORTHO05D000039 1.2e-06 57.0 132 34.8
Ciclev10028237m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.6e-06 56.6 118 28.0
FvH4_3g18950 Fragaria vesca HOM05D000007 ORTHO05D000039 1.6e-06 56.6 130 34.6
FAN11G1989 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.6e-06 56.6 112 33.0
RcHm_v2.0_Chr5g0031741 Rosa chinensis HOM05D000007 ORTHO05D000039 1.6e-06 56.6 114 33.3
CSS0001643 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 2.0e-06 56.2 127 34.6
Haze_22814 Corylus avellana HOM05D000007 ORTHO05D000039 2.0e-06 56.2 139 30.2
FAN06G4185 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.0e-06 56.2 109 33.9
CSS0030264 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 2.7e-06 55.8 128 32.8
CSS0030918 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 2.7e-06 55.8 128 32.8
SalBow4G2143 Salvia bowleyana HOM05D000007 ORTHO05D000017 2.7e-06 55.8 118 30.5
Eucgr.C02180 Eucalyptus grandis HOM05D000007 ORTHO05D000039 3.5e-06 55.5 137 31.4
FAN18G3857 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.5e-06 55.5 136 36.8
Lj1P592T13 Lonicera japonica HOM05D000007 ORTHO05D000039 3.5e-06 55.5 115 31.3
MD03G1028000 Malus domestica HOM05D000007 ORTHO05D000039 3.5e-06 55.5 113 31.9
Prupe.4G190200 Prunus persica HOM05D000007 ORTHO05D000039 3.5e-06 55.5 126 34.1
QL04p044894 Quercus lobata HOM05D000007 ORTHO05D000039 3.5e-06 55.5 129 30.2
PSO210G4324 Papaver somniferum HOM05D000007 ORTHO05D000017 4.5e-06 55.1 111 30.6
QL04p045611 Quercus lobata HOM05D000007 ORTHO05D000039 4.5e-06 55.1 131 26.7
FAN11G1189 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.9e-06 54.7 119 31.1
MD03G1027900 Malus domestica HOM05D000007 ORTHO05D000039 5.9e-06 54.7 116 30.2
Nitab4.5_0003693g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.9e-06 54.7 123 27.6
QL04p044868 Quercus lobata HOM05D000007 ORTHO05D000039 5.9e-06 54.7 128 28.1
RcHm_v2.0_Chr5g0039041 Rosa chinensis HOM05D000007 ORTHO05D000039 5.9e-06 54.7 122 29.5
FvH4_6g02391 Fragaria vesca HOM05D000007 ORTHO05D000039 7.7e-06 54.3 120 32.5
FAN25G1037 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.7e-06 54.3 125 31.2
QL07p009314 Quercus lobata HOM05D000007 ORTHO05D000039 7.7e-06 54.3 135 30.4


User provided reference genes

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