Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p019954 Quercus lobata HOM05D005439 ORTHO05D006793 1.1e-59 233.0 115 100.0
Haze_09469 Corylus avellana HOM05D005439 ORTHO05D006793 7.1e-30 134.0 78 84.6
CiPaw.08G146000 Carya illinoinensis HOM05D005439 ORTHO05D006793 2.7e-29 132.1 115 62.6
CiPaw.12G120500 Carya illinoinensis HOM05D005439 ORTHO05D006793 1.0e-28 130.2 115 62.6
Gohir.D11G296600 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.4e-27 124.0 78 75.6
Gohir.D13G039100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.6e-26 122.9 100 62.0
Gorai.007G319700 Gossypium raimondii HOM05D005439 ORTHO05D006793 2.8e-26 122.1 78 74.4
Gohir.A05G386100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.8e-26 121.3 78 73.1
Gohir.A08G188900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.8e-26 121.3 78 73.1
Gohir.A11G204100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.8e-26 121.3 78 73.1
Gohir.A11G282786 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.8e-26 121.3 75 76.0
Gohir.D08G040300 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.8e-26 121.3 78 73.1
Gohir.D10G173200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.8e-26 121.3 78 73.1
Gohir.D11G168400 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.8e-26 121.3 78 73.1
MD03G1224300 Malus domestica HOM05D005439 ORTHO05D006793 1.1e-25 120.2 70 78.6
Thecc.07G077600 Theobroma cacao HOM05D005439 ORTHO05D006793 1.1e-25 120.2 79 74.7
Gohir.D09G236700 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.4e-25 119.8 78 71.8
Cc04_g05330 Coffea canephora HOM05D005439 ORTHO05D006793 2.4e-25 119.0 82 69.5
DCAR_000742 Daucus carota HOM05D005439 ORTHO05D006793 3.1e-25 118.6 78 73.1
PSO675G4650 Papaver somniferum HOM05D005439 ORTHO05D006793 3.1e-25 118.6 71 73.2
Gohir.A08G058200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.1e-25 118.2 78 71.8
Gorai.007G117500 Gossypium raimondii HOM05D005439 ORTHO05D006793 4.1e-25 118.2 80 68.8
Gorai.013G039600 Gossypium raimondii HOM05D005439 ORTHO05D006793 4.1e-25 118.2 99 59.6
Dinv04318 Davidia involucrata HOM05D005439 ORTHO05D006793 5.3e-25 117.9 79 70.9
Lalb_Chr20g0109751 Lupinus albus HOM05D005439 ORTHO05D006793 5.3e-25 117.9 83 68.7
PSO541G3703 Papaver somniferum HOM05D005439 ORTHO05D006793 9.0e-25 117.1 71 73.2
Gorai.010G125600 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.2e-24 116.7 99 59.6
Gorai.013G217100 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.2e-24 116.7 99 58.6
Manes.15G085800 Manihot esculenta HOM05D005439 ORTHO05D006793 1.5e-24 116.3 80 70.0
Nn1g04026 Nelumbo nucifera HOM05D005439 ORTHO05D006793 2.0e-24 115.9 74 74.3
GSVIVG01014379001 Vitis vinifera HOM05D005439 ORTHO05D006793 2.0e-24 115.9 77 70.1
Rhsim04G0164900 Rhododendron simsii HOM05D005439 ORTHO05D006793 2.6e-24 115.5 79 70.9
Sabra11G0107800 Salix brachista HOM05D005439 ORTHO05D006793 4.5e-24 114.8 77 66.2
Gorai.012G015600 Gossypium raimondii HOM05D005439 ORTHO05D006793 5.9e-24 114.4 99 57.6
Potri.011G121800 Populus trichocarpa HOM05D005439 ORTHO05D006793 5.9e-24 114.4 72 70.8
Prupe.4G185100 Prunus persica HOM05D005439 ORTHO05D006793 7.6e-24 114.0 70 72.9
CANSAT80G2923 Cannabis sativa HOM05D005439 ORTHO05D006793 1.0e-23 113.6 68 73.5
Duzib170G0676 Durio zibethinus HOM05D005439 ORTHO05D006793 1.3e-23 113.2 70 75.7
TWI15G0142 Tripterygium wilfordii HOM05D005439 ORTHO05D006793 2.9e-23 112.1 77 66.2
TAR626G0706 Trochodendron aralioides HOM05D005439 ORTHO05D006793 2.9e-23 112.1 67 76.1
CSS0022813 Camellia sinensis var. sinensis HOM05D005439 ORTHO05D006793 1.1e-22 110.2 81 66.7
Aqoxy1G02538 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 1.4e-22 109.8 76 64.5
Ciclev10009838m.g Citrus clementina HOM05D005439 ORTHO05D006793 1.4e-22 109.8 75 68.0
Actinidia01110 Actinidia chinensis HOM05D005439 ORTHO05D006793 4.2e-22 108.2 80 66.2
Lsat_1_v5_gn_9_97261 Lactuca sativa HOM05D005439 ORTHO05D006793 4.2e-22 108.2 90 60.0
CAN.G162.72 Capsicum annuum HOM05D005439 ORTHO05D006793 7.2e-22 107.5 65 80.0
PGSC0003DMG400001562 Solanum tuberosum HOM05D005439 ORTHO05D006793 7.2e-22 107.5 72 70.8
Cpa.g.sc53.123 Carica papaya HOM05D005439 ORTHO05D006793 9.3e-22 107.1 90 60.0
AUR62034281 Chenopodium quinoa HOM05D005439 ORTHO05D006793 1.2e-21 106.7 72 66.7
COL.COLO4_09427 Corchorus olitorius HOM05D005439 ORTHO05D006793 1.2e-21 106.7 64 78.1
Lsat_1_v5_gn_9_97181 Lactuca sativa HOM05D005439 ORTHO05D006793 1.6e-21 106.3 68 69.1
Psat5g245080 Pisum sativum HOM05D005439 ORTHO05D006793 2.1e-21 105.9 94 58.5
TAR624G0176 Trochodendron aralioides HOM05D005439 ORTHO05D006793 3.5e-21 105.1 66 72.7
Sopen07g031460 Solanum pennellii HOM05D005439 ORTHO05D006793 6.1e-21 104.4 72 69.4
Medtr2g079590 Medicago truncatula HOM05D005439 ORTHO05D006793 7.9e-21 104.0 94 57.4
RcHm_v2.0_Chr5g0034441 Rosa chinensis HOM05D005439 ORTHO05D006793 7.9e-21 104.0 118 51.7
Glyma.13G278900 Glycine max HOM05D005439 ORTHO05D006793 1.8e-20 102.8 96 56.2
ECA240G1812 Erigeron canadensis HOM05D005439 ORTHO05D006793 2.3e-20 102.4 72 68.1
Aqoxy6G01973 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 6.7e-20 100.9 76 64.5
Dinv30229 Davidia involucrata HOM05D005439 ORTHO05D006793 6.7e-20 100.9 65 75.4
PGSC0003DMG400012454 Solanum tuberosum HOM05D005439 ORTHO05D006793 6.7e-20 100.9 65 75.4
Peaxi162Scf00998g00023 Petunia axillaris HOM05D005439 ORTHO05D006793 1.1e-19 100.1 72 63.9
vmacro08610 Vaccinium macrocarpon HOM05D005439 ORTHO05D006793 1.1e-19 100.1 77 67.5
RcHm_v2.0_Chr6g0279991 Rosa chinensis HOM05D005439 ORTHO05D006793 4.3e-19 98.2 102 53.9
Nitab4.5_0003769g0120 Nicotiana tabacum HOM05D005439 ORTHO05D006793 5.7e-19 97.8 72 62.5
Oeu037221.1 Olea europaea HOM05D005439 ORTHO05D006793 5.7e-19 97.8 78 62.8
Phvul.005G083100 Phaseolus vulgaris HOM05D005439 ORTHO05D006793 5.7e-19 97.8 72 66.7
TPR.G39010 Trifolium pratense HOM05D005439 ORTHO05D006793 7.4e-19 97.4 72 63.9
AUR62042910 Chenopodium quinoa HOM05D005439 ORTHO05D006793 1.3e-18 96.7 79 55.7
Gohir.A03G006900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.6e-18 96.3 54 79.6
HanXRQChr04g0095481 Helianthus annuus HOM05D005439 ORTHO05D006793 2.8e-18 95.5 68 64.7
arahy.Tifrunner.gnm1.ann1.5K0R4Y Arachis hypogaea HOM05D005439 ORTHO05D006793 3.7e-18 95.1 109 45.9
Lj1g0010486 Lotus japonicus HOM05D005439 ORTHO05D006793 4.8e-18 94.7 84 57.1
Eucgr.I00444 Eucalyptus grandis HOM05D005439 ORTHO05D006793 1.1e-17 93.6 77 58.4
Eucgr.L03232 Eucalyptus grandis HOM05D005439 ORTHO05D006793 1.1e-17 93.6 77 58.4
Lj3g0027158 Lotus japonicus HOM05D005439 ORTHO05D006793 1.1e-17 93.6 81 58.0
Solyc07g063290.3 Solanum lycopersicum HOM05D005439 ORTHO05D006793 3.1e-17 92.0 72 63.9
TPR.G16054 Trifolium pratense HOM05D005439 ORTHO05D006793 9.0e-17 90.5 81 59.3
EL10Ac4g09544 Beta vulgaris HOM05D005439 ORTHO05D006793 1.2e-16 90.1 75 57.3
ATR0019G055 Amborella trichopoda HOM05D005439 ORTHO05D006793 4.5e-16 88.2 69 58.0
FAN14G2189 Fragaria x ananassa HOM05D005439 ORTHO05D006793 4.5e-16 88.2 97 49.5
CDE08G1297 Ceratophyllum demersum HOM05D005439 ORTHO05D006793 8.5e-15 84.0 65 61.5
Atru.chr2.2728 Acer truncatum HOM05D005439 ORTHO05D006793 1.1e-14 83.6 103 46.6
Atru.chr2.2729 Acer truncatum HOM05D005439 ORTHO05D006793 1.1e-14 83.6 103 46.6
MD11G1243100 Malus domestica HOM05D005439 ORTHO05D006793 5.5e-14 81.3 75 54.7
arahy.Tifrunner.gnm1.ann1.KJ06EE Arachis hypogaea HOM05D005439 ORTHO05D006793 2.1e-13 79.3 61 59.0
ClCG11G007090 Citrullus lanatus HOM05D005439 ORTHO05D006793 3.9e-12 75.1 69 56.5
Hund22944 Selenicereus undatus HOM05D005439 ORTHO05D006793 5.1e-12 74.7 77 53.2
SGA_v2.0_scaffold4G02008 Striga asiatica HOM05D000346 ORTHO05D000326 3.3e-11 72.0 54 63.0
RcHm_v2.0_Chr5g0034431 Rosa chinensis HOM05D005439 ORTHO05D006793 5.7e-11 71.2 50 68.0
Nitab4.5_0010521g0020 Nicotiana tabacum HOM05D005439 ORTHO05D006793 3.7e-10 68.6 55 58.2
PGR031G3442 Punica granatum HOM05D005439 ORTHO05D006793 3.7e-10 68.6 75 48.0
Sc18g0002800 Simmondsia chinensis HOM05D005439 ORTHO05D006793 6.3e-10 67.8 78 47.4
VMungo1215G1396 Vigna mungo HOM05D005439 ORTHO05D006793 8.2e-10 67.4 48 66.7
Migut.H01926 Erythranthe guttata HOM05D005439 ORTHO05D006793 1.8e-09 66.2 70 48.6
MELO3C008192.2 Cucumis melo HOM05D005439 ORTHO05D006793 4.1e-09 65.1 74 51.4
Sed0010430 Sechium edule HOM05D005439 ORTHO05D006793 6.9e-09 64.3 75 45.3
FAN09G3549 Fragaria x ananassa HOM05D005439 ORTHO05D006793 5.9e-08 61.2 49 57.1
Sed0007807 Sechium edule HOM05D005439 ORTHO05D006793 2.2e-07 59.3 76 42.1
Zm00001eb001470 Zea mays HOM05D005439 ORTHO05D006793 3.8e-07 58.5 65 47.7
Os04g0530000 Oryza sativa ssp. japonica HOM05D005439 ORTHO05D006793 1.1e-06 57.0 65 47.7
THA.LOC104815550 Tarenaya hassleriana HOM05D005439 ORTHO05D006793 1.4e-06 56.6 105 41.0
MBI18_g17006_MAGBIO Magnolia biondii HOM05D005439 ORTHO05D006793 3.2e-06 55.5 72 43.1
BcaC03g18493 Brassica carinata HOM05D005439 ORTHO05D006793 4.2e-06 55.1 70 47.1
CARHR090470 Cardamine hirsuta HOM05D005439 ORTHO05D006793 9.4e-06 53.9 68 44.1


User provided reference genes

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