Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p018333 Quercus lobata HOM05D010293 ORTHO05D009871 6.4e-123 444.1 230 100.0
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 8.3e-54 214.5 225 57.8
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 6.2e-41 171.8 225 50.7
QL08p018585 Quercus lobata HOM05D010293 ORTHO05D009871 6.0e-36 155.2 264 44.3
QL93p2023_0014 Quercus lobata HOM05D010293 ORTHO05D009871 1.4e-32 144.1 86 84.9
QL08p018535 Quercus lobata HOM05D010293 ORTHO05D009871 2.9e-22 109.8 83 73.5
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 1.4e-21 107.5 215 38.1
CiPaw.11G176000 Carya illinoinensis HOM05D008666 ORTHO05D009871 6.6e-19 98.6 226 33.6
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 5.6e-18 95.5 225 32.0
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 9.0e-16 88.2 225 33.3
Actinidia18749 Actinidia chinensis HOM05D008666 ORTHO05D009871 2.6e-15 86.7 226 31.0
FAN21G2602 Fragaria x ananassa HOM05D001272 ORTHO05D001843 2.6e-15 86.7 240 28.8
THA.LOC104799910 Tarenaya hassleriana HOM05D008666 ORTHO05D009871 5.8e-15 85.5 221 31.7
FvH4_3g20890 Fragaria vesca HOM05D010293 ORTHO05D009871 2.9e-14 83.2 240 28.3
FAN11G0092 Fragaria x ananassa HOM05D010293 ORTHO05D009871 2.9e-14 83.2 240 28.3
Ciclev10009573m.g Citrus clementina HOM05D008666 ORTHO05D009871 6.4e-14 82.0 225 29.8
Potri.008G084200 Populus trichocarpa HOM05D008666 ORTHO05D009871 9.3e-13 78.2 187 28.9
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.8e-11 73.9 235 30.6
Prupe.4G189400 Prunus persica HOM05D010293 ORTHO05D009871 5.1e-11 72.4 126 34.1
Migut.H01908 Erythranthe guttata HOM05D008666 ORTHO05D009871 1.5e-10 70.9 93 43.0
MBI18_g11116_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.9e-10 70.5 92 46.7
MSTRG.14377 Avicennia marina HOM05D008666 ORTHO05D009871 9.6e-10 68.2 88 42.0
Oeu030433.2 Olea europaea HOM05D008666 ORTHO05D009871 1.3e-09 67.8 92 42.4
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 3.7e-09 66.2 193 27.5
Haze_09524 Corylus avellana HOM05D010293 ORTHO05D009871 4.8e-09 65.9 58 51.7
COL.COLO4_09475 Corchorus olitorius HOM05D008666 ORTHO05D009871 6.2e-09 65.5 231 29.0
Thecc.07G071900 Theobroma cacao HOM05D008666 ORTHO05D009871 8.1e-09 65.1 214 29.9
Cfa020509 Carpinus fangiana HOM05D010293 ORTHO05D009871 1.4e-08 64.3 58 51.7
Manes.01G178300 Manihot esculenta HOM05D008666 ORTHO05D009871 1.8e-08 63.9 191 28.3
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 2.4e-08 63.5 92 41.3
MD03G1219600 Malus domestica HOM05D010293 ORTHO05D009871 3.1e-08 63.2 120 33.3
HanXRQChr03g0075931 Helianthus annuus HOM05D008666 ORTHO05D009871 4.0e-08 62.8 225 26.2
TAR599G0004 Trochodendron aralioides HOM05D008666 ORTHO05D009871 1.2e-07 61.2 142 32.4
MBI18_g11119_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 3.4e-07 59.7 81 43.2
CANSAT11G1747 Cannabis sativa HOM05D008666 ORTHO05D009871 5.8e-07 58.9 92 40.2
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 7.6e-07 58.5 153 32.7
Gohir.D13G148800 Gossypium hirsutum HOM05D001272 ORTHO05D001843 1.3e-06 57.8 93 41.9
Atru.chr2.2827 Acer truncatum HOM05D038199 ORTHO05D009871 3.8e-06 56.2 205 28.3
Cpa.g.sc80.110 Carica papaya HOM05D048510 ORTHO05D009871 8.4e-06 55.1 157 28.0
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 8.4e-06 55.1 149 30.9


User provided reference genes

Program Settings