Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 2.3e-179 632.1 317 100.0
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 3.0e-78 296.2 343 56.9
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 2.1e-68 263.5 339 52.8
Haze_09553 Corylus avellana HOM05D008268 ORTHO05D010144 1.7e-57 227.3 332 50.0
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 3.6e-47 193.0 347 44.1
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 2.3e-46 190.3 342 44.2
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 4.2e-40 169.5 346 41.6
MD11G1234600 Malus domestica HOM05D008268 ORTHO05D010144 2.3e-38 163.7 387 38.2
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 5.2e-38 162.5 332 38.9
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 8.8e-38 161.8 356 42.1
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 3.7e-36 156.4 312 42.3
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 1.4e-35 154.5 359 39.8
MD03G1216800 Malus domestica HOM05D008268 ORTHO05D010144 1.8e-35 154.1 281 44.8
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 1.8e-35 154.1 309 41.7
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 9.1e-35 151.8 355 41.1
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 1.2e-34 151.4 350 40.6
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 5.9e-34 149.1 353 41.4
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 5.9e-34 149.1 353 41.4
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 1.9e-32 144.1 333 41.4
Duzib213G0412 Durio zibethinus HOM05D008268 ORTHO05D010144 1.9e-32 144.1 337 38.9
Lalb_Chr25g0286831 Lupinus albus HOM05D008268 ORTHO05D010144 2.6e-29 133.7 348 39.7
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 6.3e-28 129.0 326 35.6
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 3.1e-27 126.7 295 36.9
Potri.001G409000 Populus trichocarpa HOM05D019858 ORTHO05D010144 1.2e-23 114.8 352 35.5
Atru.chr2.2941 Acer truncatum HOM05D008268 ORTHO05D010144 6.1e-23 112.5 329 37.1
MBI02_g38752_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 6.1e-23 112.5 281 35.6
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 1.4e-22 111.3 330 34.2
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 1.8e-22 110.9 331 34.1
Sabra16G0271800 Salix brachista HOM05D019858 ORTHO05D010144 1.8e-22 110.9 353 35.4
Sabra16G0276800 Salix brachista HOM05D019858 ORTHO05D010144 1.8e-22 110.9 353 35.4
Nn1g06831 Nelumbo nucifera HOM05D008268 ORTHO05D010144 2.3e-22 110.5 332 33.4
Potri.011G125600 Populus trichocarpa HOM05D019858 ORTHO05D010144 3.0e-22 110.2 337 32.3
MBI02_g46151_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 4.0e-22 109.8 281 35.2
arahy.Tifrunner.gnm1.ann1.Y898LB Arachis hypogaea HOM05D008268 ORTHO05D010144 2.0e-21 107.5 317 34.7
RhsimUnG0172800 Rhododendron simsii HOM05D047612 ORTHO05D010144 2.6e-21 107.1 322 36.6
arahy.Tifrunner.gnm1.ann1.R70FHG Arachis hypogaea HOM05D008268 ORTHO05D010144 3.4e-21 106.7 303 35.3
Glyma.12G217800 Glycine max HOM05D008268 ORTHO05D010144 4.4e-21 106.3 248 40.7
COL.COLO4_09500 Corchorus olitorius HOM05D008268 ORTHO05D010144 2.2e-20 104.0 152 46.7
GSVIVG01014468001 Vitis vinifera HOM05D008268 ORTHO05D010144 3.7e-20 103.2 226 38.9
TWI38G2068 Tripterygium wilfordii HOM05D008268 ORTHO05D010144 1.6e-18 97.8 325 34.8
Nn1g03824 Nelumbo nucifera HOM05D008268 ORTHO05D010144 3.5e-18 96.7 278 34.9
Oeu061273.1 Olea europaea HOM05D008268 ORTHO05D010144 3.5e-18 96.7 338 32.2
SHI51816 Sapria himalayana HOM05D008268 ORTHO05D010144 4.5e-18 96.3 342 30.7
Peaxi162Scf00000g07812 Petunia axillaris HOM05D015394 ORTHO05D017774 1.7e-17 94.4 302 33.4
CANSAT11G1352 Cannabis sativa HOM05D008268 ORTHO05D010144 2.3e-17 94.0 384 31.8
ClCG11G018600 Citrullus lanatus HOM05D008268 ORTHO05D010144 5.0e-17 92.8 349 32.4
MELO3C018179.2 Cucumis melo HOM05D008268 ORTHO05D010144 5.0e-17 92.8 325 32.0
THA.LOC104799901 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 5.0e-17 92.8 332 31.3
Lsat_1_v5_gn_0_5400 Lactuca sativa HOM05D008268 ORTHO05D010144 1.9e-16 90.9 255 33.3
RhsimUnG0257100 Rhododendron simsii HOM05D047612 ORTHO05D010144 2.1e-15 87.4 330 34.5
Sabra11G0111900 Salix brachista HOM05D019858 ORTHO05D010144 2.1e-15 87.4 336 31.0
Rhsim06G0192000 Rhododendron simsii HOM05D008268 ORTHO05D010144 8.0e-15 85.5 331 31.4
Ca_01792_v3 Cicer arietinum L. HOM05D008268 ORTHO05D010144 1.0e-14 85.1 91 59.3
RcHm_v2.0_Chr6g0255571 Rosa chinensis HOM05D014484 ORTHO05D017021 1.0e-14 85.1 290 30.3
Nitab4.5_0001252g0050 Nicotiana tabacum HOM05D015394 ORTHO05D017774 1.8e-14 84.3 342 31.9
FAN27G0943 Fragaria x ananassa HOM05D014484 ORTHO05D017021 8.9e-14 82.0 324 29.3
Psat5g247560 Pisum sativum HOM05D008268 ORTHO05D010144 3.4e-13 80.1 333 33.0
TPR.G32855 Trifolium pratense HOM05D008268 ORTHO05D010144 3.4e-13 80.1 321 32.1
CsaV3_3G044260 Cucumis sativus L. HOM05D008268 ORTHO05D010144 2.2e-12 77.4 341 29.3
Medtr2g081240 Medicago truncatula HOM05D008268 ORTHO05D010144 2.9e-12 77.0 325 32.0
Nitab4.5_0000297g0210 Nicotiana tabacum HOM05D015394 ORTHO05D017774 6.4e-12 75.9 365 31.0
PGR083G1493 Punica granatum HOM05D008268 ORTHO05D010144 8.3e-12 75.5 206 35.9
Migut.M01849 Erythranthe guttata HOM05D008268 ORTHO05D010144 2.4e-11 73.9 268 32.8
THA.LOC104809278 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 2.4e-11 73.9 346 31.8
Eucgr.F01065 Eucalyptus grandis HOM05D008268 ORTHO05D010144 7.8e-10 68.9 227 32.2
Eucgr.F01064 Eucalyptus grandis HOM05D008268 ORTHO05D010144 3.0e-09 67.0 113 44.2
FAN15G0243 Fragaria x ananassa HOM05D014484 ORTHO05D017021 3.9e-09 66.6 321 27.7
Sed0023643 Sechium edule HOM05D008268 ORTHO05D010144 8.6e-09 65.5 300 28.7
FvH4_2g05340 Fragaria vesca HOM05D014484 ORTHO05D017021 1.1e-08 65.1 264 28.4
FAN24G1810 Fragaria x ananassa HOM05D014484 ORTHO05D017021 1.1e-08 65.1 264 28.4
FAN20G1673 Fragaria x ananassa HOM05D014484 ORTHO05D017021 3.3e-08 63.5 293 29.0
CARHR234980 Cardamine hirsuta HOM05D010655 ORTHO05D012747 7.3e-08 62.4 315 29.8
Lalb_Chr20g0110041 Lupinus albus HOM05D008268 ORTHO05D010144 1.2e-07 61.6 111 43.2
Carub.0007s1355 Capsella rubella HOM05D010655 ORTHO05D012747 3.6e-07 60.1 324 29.3
CDE02G2061 Ceratophyllum demersum HOM05D057939 ORTHO05D010144 8.0e-07 58.9 252 29.8
HPP92_015977 Vanilla planifolia HOM05D008268 ORTHO05D010144 1.1e-06 58.5 85 43.5
Aa31LG5G10170 Aethionema arabicum HOM05D010655 ORTHO05D012747 1.4e-06 58.2 326 28.5
BraA01t01800Z Brassica rapa HOM05D010655 ORTHO05D012747 1.8e-06 57.8 334 29.6
A01p18510 Brassica napus HOM05D010655 ORTHO05D012747 2.3e-06 57.4 334 29.6
BolC1t02292H Brassica oleracea HOM05D010655 ORTHO05D012747 2.3e-06 57.4 340 28.2
CAN.G162.112 Capsicum annuum HOM05D015394 ORTHO05D017774 4.0e-06 56.6 320 28.4
Prupe.6G133800 Prunus persica HOM05D037566 ORTHO05D010144 8.9e-06 55.5 142 33.8


User provided reference genes

Program Settings