Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p015943 Quercus lobata HOM05D001910 ORTHO05D008236 2.9e-32 141.4 75 100.0
QL07p034597 Quercus lobata HOM05D001910 ORTHO05D008236 3.3e-28 127.9 73 93.2
QL04p069147 Quercus lobata HOM05D001910 ORTHO05D008236 2.8e-27 124.8 73 90.4
QL07p034561 Quercus lobata HOM05D001910 ORTHO05D008236 6.3e-27 123.6 73 89.0
QL08p015961 Quercus lobata HOM05D001910 ORTHO05D008236 1.1e-26 122.9 73 90.4
QL04p055010 Quercus lobata HOM05D001910 ORTHO05D008236 7.0e-26 120.2 73 89.0
CiPaw.03G151600 Carya illinoinensis HOM05D001910 ORTHO05D008236 7.2e-23 110.2 72 79.2
Actinidia30091 Actinidia chinensis HOM05D001910 ORTHO05D008236 9.4e-23 109.8 71 80.3
HanXRQChr01g0014701 Helianthus annuus HOM05D001910 ORTHO05D008236 9.4e-23 109.8 71 77.5
Hma1.2p1_0670F.1_g200480 Hydrangea macrophylla HOM05D001910 ORTHO05D008236 2.1e-22 108.6 71 76.1
Hma1.2p1_0670F.1_g200490 Hydrangea macrophylla HOM05D001910 ORTHO05D008236 2.1e-22 108.6 71 76.1
Lj5g0014177 Lotus japonicus HOM05D001910 ORTHO05D008236 2.7e-22 108.2 71 76.1
Dinv04667 Davidia involucrata HOM05D001910 ORTHO05D008236 3.6e-22 107.8 71 80.3
CSS0019761 Camellia sinensis var. sinensis HOM05D001910 ORTHO05D008236 4.7e-22 107.5 71 76.1
COL.COLO4_17529 Corchorus olitorius HOM05D001910 ORTHO05D008236 4.7e-22 107.5 71 76.1
Haze_24772 Corylus avellana HOM05D001910 ORTHO05D008236 6.1e-22 107.1 71 80.3
Lsat_1_v5_gn_5_179721 Lactuca sativa HOM05D001910 ORTHO05D008236 6.1e-22 107.1 71 73.2
Lj5g0012786 Lotus japonicus HOM05D001910 ORTHO05D008236 6.1e-22 107.1 71 74.6
Nitab4.5_0002085g0120 Nicotiana tabacum HOM05D001910 ORTHO05D008236 8.0e-22 106.7 70 75.7
Cfa002548 Carpinus fangiana HOM05D001910 ORTHO05D008236 1.0e-21 106.3 71 80.3
Cc02_g29620 Coffea canephora HOM05D001910 ORTHO05D008236 1.0e-21 106.3 71 74.6
TPR.G22393 Trifolium pratense HOM05D001910 ORTHO05D008236 1.0e-21 106.3 71 74.6
Potri.001G287600 Populus trichocarpa HOM05D001910 ORTHO05D008236 1.4e-21 105.9 75 72.0
SEGI_34564 Sequoiadendron giganteum HOM05D001910 ORTHO05D008236 1.4e-21 105.9 71 71.8
Eucgr.H00809 Eucalyptus grandis HOM05D001910 ORTHO05D008236 1.8e-21 105.5 71 76.1
Lj5g0025373 Lotus japonicus HOM05D001910 ORTHO05D008236 1.8e-21 105.5 71 73.2
THA.LOC104808775 Tarenaya hassleriana HOM05D001910 ORTHO05D008236 1.8e-21 105.5 71 74.6
Gohir.D01G042702 Gossypium hirsutum HOM05D001910 ORTHO05D008236 2.3e-21 105.1 71 73.2
Gorai.002G053700 Gossypium raimondii HOM05D001910 ORTHO05D008236 2.3e-21 105.1 71 73.2
Atru.chr8.786 Acer truncatum HOM05D001910 ORTHO05D008236 3.0e-21 104.8 72 73.6
CsaV3_7G025770 Cucumis sativus L. HOM05D001910 ORTHO05D008236 3.0e-21 104.8 71 76.1
Oeu020385.1 Olea europaea HOM05D001910 ORTHO05D008236 3.0e-21 104.8 70 77.1
PGR083G0261 Punica granatum HOM05D001910 ORTHO05D008236 3.0e-21 104.8 71 73.2
Gohir.A01G053300 Gossypium hirsutum HOM05D001910 ORTHO05D008236 3.9e-21 104.4 71 73.2
Nn1g03143 Nelumbo nucifera HOM05D001910 ORTHO05D008236 3.9e-21 104.4 71 74.6
Duzib213G0818 Durio zibethinus HOM05D001910 ORTHO05D008236 5.2e-21 104.0 71 73.2
Manes.12G042200 Manihot esculenta HOM05D001910 ORTHO05D008236 5.2e-21 104.0 71 73.2
Rhsim01G0257800 Rhododendron simsii HOM05D001910 ORTHO05D008236 5.2e-21 104.0 71 76.1
Sabra16G0179900 Salix brachista HOM05D001910 ORTHO05D008236 5.2e-21 104.0 76 71.1
Sed0026342 Sechium edule HOM05D001910 ORTHO05D008236 5.2e-21 104.0 71 74.6
Actinidia37580 Actinidia chinensis HOM05D001910 ORTHO05D008236 6.7e-21 103.6 71 74.6
arahy.Tifrunner.gnm1.ann1.BW0B7M Arachis hypogaea HOM05D001910 ORTHO05D008236 6.7e-21 103.6 71 73.2
CDE02G3332 Ceratophyllum demersum HOM05D001910 ORTHO05D008236 6.7e-21 103.6 71 76.1
EL10Ac1g01456 Beta vulgaris HOM05D001910 ORTHO05D008236 8.8e-21 103.2 71 71.8
EL10Ac4g08878 Beta vulgaris HOM05D001910 ORTHO05D008236 8.8e-21 103.2 71 71.8
CANSAT01G0581 Cannabis sativa HOM05D001910 ORTHO05D008236 8.8e-21 103.2 71 76.1
MELO3C012778.2 Cucumis melo HOM05D001910 ORTHO05D008236 8.8e-21 103.2 71 73.2
Thecc.07G118300 Theobroma cacao HOM05D001910 ORTHO05D008236 8.8e-21 103.2 71 73.2
Ciclev10022683m.g Citrus clementina HOM05D001910 ORTHO05D008236 1.1e-20 102.8 71 71.8
Hund05522 Selenicereus undatus HOM05D001910 ORTHO05D008236 1.1e-20 102.8 71 70.4
ATR0580G225 Amborella trichopoda HOM05D001910 ORTHO05D008236 1.5e-20 102.4 71 70.4
Aqoxy2G03787 Aquilegia oxysepala HOM05D001910 ORTHO05D008236 1.5e-20 102.4 73 71.2
arahy.Tifrunner.gnm1.ann1.6V862X Arachis hypogaea HOM05D001910 ORTHO05D008236 1.5e-20 102.4 71 71.8
Carub.0003s2512 Capsella rubella HOM05D001910 ORTHO05D008236 1.5e-20 102.4 73 68.5
Ca_10470_v3 Cicer arietinum L. HOM05D001910 ORTHO05D008236 1.5e-20 102.4 71 76.1
Solyc06g083570.3 Solanum lycopersicum HOM05D001910 ORTHO05D008236 1.5e-20 102.4 70 71.4
Sopen06g034950 Solanum pennellii HOM05D001910 ORTHO05D008236 1.5e-20 102.4 70 71.4
THA.LOC104821641 Tarenaya hassleriana HOM05D001910 ORTHO05D008236 1.5e-20 102.4 71 74.6
AL3G40450 Arabidopsis lyrata HOM05D001910 ORTHO05D008236 2.0e-20 102.1 71 71.8
CANSAT01G2429 Cannabis sativa HOM05D001910 ORTHO05D008236 2.0e-20 102.1 72 72.2
Lalb_Chr21g0313131 Lupinus albus HOM05D001910 ORTHO05D008236 2.0e-20 102.1 72 69.4
MD11G1172800 Malus domestica HOM05D001910 ORTHO05D008236 2.0e-20 102.1 71 76.1
Peaxi162Scf00517g00431 Petunia axillaris HOM05D001910 ORTHO05D008236 2.0e-20 102.1 70 70.0
Prupe.2G099400 Prunus persica HOM05D001910 ORTHO05D008236 2.0e-20 102.1 70 74.3
Lj2A1134T22 Lonicera japonica HOM05D001910 ORTHO05D008236 3.3e-20 101.3 83 68.7
Medtr1g080840 Medicago truncatula HOM05D001910 ORTHO05D008236 3.3e-20 101.3 71 71.8
TAR365G0897 Trochodendron aralioides HOM05D001910 ORTHO05D008236 3.3e-20 101.3 71 71.8
PGSC0003DMG400020157 Solanum tuberosum HOM05D001910 ORTHO05D008236 4.4e-20 100.9 70 70.0
vmacro14768 Vaccinium macrocarpon HOM05D001910 ORTHO05D008236 4.4e-20 100.9 68 77.9
vmacro11682 Vaccinium macrocarpon HOM05D001910 ORTHO05D008236 5.7e-20 100.5 68 75.0
GSVIVG01028558001 Vitis vinifera HOM05D001910 ORTHO05D008236 5.7e-20 100.5 71 71.8
Psat5g176160 Pisum sativum HOM05D001910 ORTHO05D008236 7.4e-20 100.1 71 70.4
RcHm_v2.0_Chr5g0046911 Rosa chinensis HOM05D001910 ORTHO05D008236 7.4e-20 100.1 72 72.2
PSO455G0057 Papaver somniferum HOM05D001910 ORTHO05D008236 9.7e-20 99.8 71 71.8
AT3G24730 Arabidopsis thaliana HOM05D001910 ORTHO05D008236 1.3e-19 99.4 71 67.6
CAN.G771.59 Capsicum annuum HOM05D001910 ORTHO05D008236 1.3e-19 99.4 70 71.4
Cpa.g.sc8.177 Carica papaya HOM05D001910 ORTHO05D008236 2.2e-19 98.6 71 67.6
Sp3g22460 Schrenkiella parvula HOM05D001910 ORTHO05D008236 2.2e-19 98.6 70 71.4
CARHR101060 Cardamine hirsuta HOM05D001910 ORTHO05D008236 2.8e-19 98.2 71 67.6
Duzib116G0073 Durio zibethinus HOM05D001910 ORTHO05D008236 2.8e-19 98.2 71 67.6
SMO367G1217 Selaginella moellendorffii HOM05D001910 ORTHO05D008236 2.8e-19 98.2 69 68.1
BcaC01g03256 Brassica carinata HOM05D001910 ORTHO05D008236 6.3e-19 97.1 74 66.2
C03p54270 Brassica napus HOM05D001910 ORTHO05D008236 6.3e-19 97.1 74 66.2
BolC3t17713H Brassica oleracea HOM05D001910 ORTHO05D008236 6.3e-19 97.1 74 66.2
BraA03t13522Z Brassica rapa HOM05D001910 ORTHO05D008236 8.2e-19 96.7 74 66.2
SGA_v2.0_scaffold1G00713 Striga asiatica HOM05D001910 ORTHO05D008236 8.2e-19 96.7 70 70.0
SGA_v2.0_scaffold467G52032 Striga asiatica HOM05D001910 ORTHO05D008236 8.2e-19 96.7 70 70.0
FvH4_3g25760 Fragaria vesca HOM05D001910 ORTHO05D008236 1.1e-18 96.3 72 68.1
FAN11G0824 Fragaria x ananassa HOM05D001910 ORTHO05D008236 1.1e-18 96.3 72 68.1
FAN25G3251 Fragaria x ananassa HOM05D001910 ORTHO05D008236 1.1e-18 96.3 72 68.1
MSTRG.21434 Avicennia marina HOM05D001910 ORTHO05D008236 1.4e-18 95.9 70 68.6
BcaB03g14567 Brassica carinata HOM05D001910 ORTHO05D008236 1.8e-18 95.5 74 64.9
FAN16G2655 Fragaria x ananassa HOM05D001910 ORTHO05D008236 1.8e-18 95.5 71 67.6
Glyma.20G189700 Glycine max HOM05D001910 ORTHO05D008236 1.8e-18 95.5 71 69.0
DCAR_012631 Daucus carota HOM05D001910 ORTHO05D008236 2.4e-18 95.1 71 67.6
Migut.D00518 Erythranthe guttata HOM05D001910 ORTHO05D008236 2.4e-18 95.1 70 70.0
Sc05g0002380 Simmondsia chinensis HOM05D001910 ORTHO05D008236 4.1e-18 94.4 68 70.6
Thhalv10002702m.g Eutrema salsugineum HOM05D001910 ORTHO05D008236 5.3e-18 94.0 69 71.0
unitig_8.g3604 Utricularia gibba HOM05D001910 ORTHO05D008236 5.3e-18 94.0 71 63.4
SalBow4G2176 Salvia bowleyana HOM05D001910 ORTHO05D008236 2.0e-17 92.0 70 67.1
AagrBONN_evm.TU.Sc2ySwM_117.2466 Anthoceros agrestis HOM05D001910 ORTHO05D008236 2.6e-17 91.7 71 64.8
ClCG09G009170 Citrullus lanatus HOM05D001910 ORTHO05D008236 2.6e-17 91.7 65 70.8
Zm00001eb327680 Zea mays HOM05D001910 ORTHO05D008236 2.6e-17 91.7 74 63.5
CBR_g52407 Chara braunii HOM05D001910 ORTHO05D008236 3.5e-17 91.3 71 62.0
Os11g0297900 Oryza sativa ssp. japonica HOM05D001910 ORTHO05D008236 4.5e-17 90.9 74 60.8
Mapoly0023s0044 Marchantia polymorpha HOM05D001910 ORTHO05D008236 7.7e-17 90.1 71 66.2
Phvul.007G144300 Phaseolus vulgaris HOM05D001910 ORTHO05D008236 1.7e-16 89.0 71 66.2
HPP92_008933 Vanilla planifolia HOM05D001910 ORTHO05D008236 2.2e-16 88.6 71 57.7
VMungo0720G1587 Vigna mungo HOM05D001910 ORTHO05D008236 1.9e-15 85.5 60 70.0
Pp3c22_7790 Physcomitrium patens HOM05D001910 ORTHO05D008236 2.5e-15 85.1 71 57.7
Aa31LG8G7820 Aethionema arabicum HOM05D001910 ORTHO05D008236 2.0e-12 75.5 65 58.5
TWI36G0271 Tripterygium wilfordii HOM05D001910 ORTHO05D008236 2.2e-08 62.0 70 54.3
QL07p034638 Quercus lobata HOM05D001910 ORTHO05D008236 3.2e-07 58.2 107 44.9


User provided reference genes

Program Settings