Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p014302 Quercus lobata HOM05D006929 ORTHO05D008646 6.4e-76 287.3 145 100.0
QL06p051910 Quercus lobata HOM05D006929 ORTHO05D008646 3.0e-41 172.2 113 80.5
TAR381G0226 Trochodendron aralioides HOM05D006929 ORTHO05D008646 3.7e-31 138.7 121 63.6
Atru.chr3.900 Acer truncatum HOM05D006929 ORTHO05D008646 4.8e-31 138.3 121 62.8
ClCG01G020570 Citrullus lanatus HOM05D006929 ORTHO05D008646 1.1e-30 137.1 121 62.0
CsaV3_6G047480 Cucumis sativus L. HOM05D006929 ORTHO05D008646 1.4e-30 136.7 121 62.0
TWI73G0481 Tripterygium wilfordii HOM05D006929 ORTHO05D008646 1.8e-30 136.3 121 62.0
Lalb_Chr16g0391511 Lupinus albus HOM05D006929 ORTHO05D008646 2.4e-30 136.0 112 65.2
TWI53G0685 Tripterygium wilfordii HOM05D006929 ORTHO05D008646 2.4e-30 136.0 121 62.0
COL.COLO4_22488 Corchorus olitorius HOM05D006929 ORTHO05D008646 3.1e-30 135.6 121 59.5
Ca_03636_v3 Cicer arietinum L. HOM05D006929 ORTHO05D008646 4.0e-30 135.2 112 65.2
MELO3C007939.2 Cucumis melo HOM05D006929 ORTHO05D008646 5.3e-30 134.8 121 61.2
PSO170G0764 Papaver somniferum HOM05D006929 ORTHO05D008646 6.9e-30 134.4 113 62.8
PSO210G4353 Papaver somniferum HOM05D006929 ORTHO05D008646 6.9e-30 134.4 113 63.7
Duzib147G1132 Durio zibethinus HOM05D006929 ORTHO05D008646 9.0e-30 134.0 121 57.9
Cpa.g.sc6.307 Carica papaya HOM05D006929 ORTHO05D008646 1.2e-29 133.7 121 58.7
Ciclev10024912m.g Citrus clementina HOM05D006929 ORTHO05D008646 1.2e-29 133.7 121 61.2
Actinidia28729 Actinidia chinensis HOM05D006929 ORTHO05D008646 1.5e-29 133.3 121 57.9
MD02G1124200 Malus domestica HOM05D006929 ORTHO05D008646 1.5e-29 133.3 122 58.2
Prupe.7G174200 Prunus persica HOM05D006929 ORTHO05D008646 1.5e-29 133.3 122 58.2
Thecc.01G012300 Theobroma cacao HOM05D006929 ORTHO05D008646 2.0e-29 132.9 121 57.0
Lalb_Chr09g0334271 Lupinus albus HOM05D006929 ORTHO05D008646 2.6e-29 132.5 112 64.3
Aqoxy5G01127 Aquilegia oxysepala HOM05D006929 ORTHO05D008646 3.4e-29 132.1 113 63.7
Lj4g0000234 Lotus japonicus HOM05D006929 ORTHO05D008646 3.4e-29 132.1 112 64.3
Psat4g102480 Pisum sativum HOM05D006929 ORTHO05D008646 3.4e-29 132.1 112 63.4
THA.LOC104814667 Tarenaya hassleriana HOM05D006929 ORTHO05D008646 3.4e-29 132.1 113 59.3
CANSAT01G2329 Cannabis sativa HOM05D006929 ORTHO05D008646 4.5e-29 131.7 113 61.9
FAN19G3132 Fragaria x ananassa HOM05D006929 ORTHO05D008646 4.5e-29 131.7 122 58.2
arahy.Tifrunner.gnm1.ann1.66U8DG Arachis hypogaea HOM05D006929 ORTHO05D008646 5.8e-29 131.3 121 60.3
Medtr8g074970 Medicago truncatula HOM05D006929 ORTHO05D008646 5.8e-29 131.3 112 61.6
Dinv40140 Davidia involucrata HOM05D006929 ORTHO05D008646 7.6e-29 131.0 121 57.9
FAN26G2428 Fragaria x ananassa HOM05D006929 ORTHO05D008646 7.6e-29 131.0 122 58.2
Manes.02G109700 Manihot esculenta HOM05D006929 ORTHO05D008646 7.6e-29 131.0 120 60.8
Duzib264G0985 Durio zibethinus HOM05D006929 ORTHO05D008646 9.9e-29 130.6 121 55.4
Gohir.A11G172100 Gossypium hirsutum HOM05D006929 ORTHO05D008646 9.9e-29 130.6 121 55.4
CiPaw.07G062900 Carya illinoinensis HOM05D006929 ORTHO05D008646 1.3e-28 130.2 113 62.8
FAN23G2594 Fragaria x ananassa HOM05D006929 ORTHO05D008646 1.3e-28 130.2 122 57.4
Gohir.D11G179100 Gossypium hirsutum HOM05D006929 ORTHO05D008646 1.3e-28 130.2 121 55.4
Gorai.007G191000 Gossypium raimondii HOM05D006929 ORTHO05D008646 1.3e-28 130.2 121 55.4
Solyc02g083430.1 Solanum lycopersicum HOM05D006929 ORTHO05D008646 1.3e-28 130.2 122 58.2
PGSC0003DMG400003658 Solanum tuberosum HOM05D006929 ORTHO05D008646 1.3e-28 130.2 122 58.2
Sopen02g028220 Solanum pennellii HOM05D006929 ORTHO05D008646 1.7e-28 129.8 122 57.4
FvH4_1g11170 Fragaria vesca HOM05D006929 ORTHO05D008646 2.9e-28 129.0 122 57.4
FAN28G2763 Fragaria x ananassa HOM05D006929 ORTHO05D008646 2.9e-28 129.0 122 57.4
Phvul.003G266800 Phaseolus vulgaris HOM05D006929 ORTHO05D008646 3.8e-28 128.6 112 63.4
RcHm_v2.0_Chr2g0098461 Rosa chinensis HOM05D006929 ORTHO05D008646 4.9e-28 128.3 122 56.6
CSS0014208 Camellia sinensis var. sinensis HOM05D006929 ORTHO05D008646 6.4e-28 127.9 121 57.0
CSS0041887 Camellia sinensis var. sinensis HOM05D006929 ORTHO05D008646 6.4e-28 127.9 121 57.0
Cc07_g11260 Coffea canephora HOM05D006929 ORTHO05D008646 6.4e-28 127.9 122 57.4
Oeu032040.1 Olea europaea HOM05D006929 ORTHO05D008646 6.4e-28 127.9 121 54.5
Glyma.02G044800 Glycine max HOM05D006929 ORTHO05D008646 8.4e-28 127.5 112 61.6
Cfa007024 Carpinus fangiana HOM05D006929 ORTHO05D008646 1.1e-27 127.1 121 57.9
Haze_03709 Corylus avellana HOM05D006929 ORTHO05D008646 1.1e-27 127.1 121 57.9
PGR119G0759 Punica granatum HOM05D006929 ORTHO05D008646 1.1e-27 127.1 116 60.3
MD15G1238200 Malus domestica HOM05D006929 ORTHO05D008646 1.9e-27 126.3 122 55.7
Nitab4.5_0002105g0010 Nicotiana tabacum HOM05D006929 ORTHO05D008646 1.9e-27 126.3 122 55.7
Nitab4.5_0006899g0010 Nicotiana tabacum HOM05D006929 ORTHO05D008646 1.9e-27 126.3 122 55.7
Sed0020872 Sechium edule HOM05D006929 ORTHO05D008646 1.9e-27 126.3 121 57.9
Sc07g0001190 Simmondsia chinensis HOM05D006929 ORTHO05D008646 1.9e-27 126.3 121 56.2
SGA_v2.0_scaffold29G12165 Striga asiatica HOM05D006929 ORTHO05D008646 2.4e-27 125.9 121 53.7
BcaC01g00525 Brassica carinata HOM05D006929 ORTHO05D008646 4.2e-27 125.2 113 58.4
A08p21630 Brassica napus HOM05D006929 ORTHO05D008646 4.2e-27 125.2 113 58.4
C03p80950 Brassica napus HOM05D006929 ORTHO05D008646 4.2e-27 125.2 113 58.4
BolC3t20354H Brassica oleracea HOM05D006929 ORTHO05D008646 4.2e-27 125.2 113 58.4
BraA08t34110Z Brassica rapa HOM05D006929 ORTHO05D008646 4.2e-27 125.2 113 58.4
Migut.D00696 Erythranthe guttata HOM05D006929 ORTHO05D008646 4.2e-27 125.2 121 52.9
Aa31LG6G12820 Aethionema arabicum HOM05D006929 ORTHO05D008646 7.1e-27 124.4 113 56.6
Thhalv10024429m.g Eutrema salsugineum HOM05D006929 ORTHO05D008646 7.1e-27 124.4 113 57.5
ECA238G2047 Erigeron canadensis HOM05D006929 ORTHO05D008646 9.3e-27 124.0 121 54.5
MSTRG.21326 Avicennia marina HOM05D006929 ORTHO05D008646 1.2e-26 123.6 121 51.2
BcaB03g12433 Brassica carinata HOM05D006929 ORTHO05D008646 1.2e-26 123.6 113 56.6
MBI05_g00179_MAGBIO Magnolia biondii HOM05D006929 ORTHO05D008646 1.6e-26 123.2 121 54.5
CARHR244260 Cardamine hirsuta HOM05D006929 ORTHO05D008646 2.1e-26 122.9 105 61.0
CAN.G890.36 Capsicum annuum HOM05D006929 ORTHO05D008646 2.7e-26 122.5 122 54.1
THA.LOC104819967 Tarenaya hassleriana HOM05D006929 ORTHO05D008646 2.7e-26 122.5 105 59.0
VMungo0251G3358 Vigna mungo HOM05D006929 ORTHO05D008646 2.7e-26 122.5 112 60.7
AL7G15180 Arabidopsis lyrata HOM05D006929 ORTHO05D008646 3.5e-26 122.1 113 55.8
AT4G35870 Arabidopsis thaliana HOM05D006929 ORTHO05D008646 3.5e-26 122.1 113 55.8
Glyma.16G122300 Glycine max HOM05D006929 ORTHO05D008646 4.6e-26 121.7 111 59.5
SHI31694 Sapria himalayana HOM05D006929 ORTHO05D008646 4.6e-26 121.7 121 54.5
Carub.0007s0436 Capsella rubella HOM05D006929 ORTHO05D008646 1.3e-25 120.2 105 59.0
Peaxi162Scf00328g00022 Petunia axillaris HOM05D006929 ORTHO05D008646 1.3e-25 120.2 122 54.1
DCAR_011578 Daucus carota HOM05D006929 ORTHO05D008646 3.0e-25 119.0 121 52.1
Potri.005G108600 Populus trichocarpa HOM05D006929 ORTHO05D008646 5.1e-25 118.2 121 54.5
Potri.007G063700 Populus trichocarpa HOM05D006929 ORTHO05D008646 5.1e-25 118.2 112 58.9
Sabra05G0089000 Salix brachista HOM05D006929 ORTHO05D008646 5.1e-25 118.2 121 54.5
Rhsim08G0030500 Rhododendron simsii HOM05D006929 ORTHO05D008646 3.3e-24 115.5 122 54.1
ATR0661G330 Amborella trichopoda HOM05D006929 ORTHO05D008646 3.7e-23 112.1 97 57.7
unitig_90.g27492 Utricularia gibba HOM05D006929 ORTHO05D008646 6.2e-23 111.3 122 47.5
AUR62026231 Chenopodium quinoa HOM05D006929 ORTHO05D008646 5.3e-22 108.2 113 54.0
SEGI_26365 Sequoiadendron giganteum HOM05D006929 ORTHO05D008646 9.0e-22 107.5 103 53.4
AUR62026416 Chenopodium quinoa HOM05D006929 ORTHO05D008646 1.2e-21 107.1 110 53.6
Ah.02g129150 Amaranthus hybridus HOM05D006929 ORTHO05D008646 2.2e-20 102.8 113 52.2
Nn6g31928 Nelumbo nucifera HOM05D006929 ORTHO05D008646 3.8e-20 102.1 87 63.2
TPR.G19477 Trifolium pratense HOM05D006929 ORTHO05D008646 1.4e-19 100.1 88 58.0
HPP92_015018 Vanilla planifolia HOM05D006929 ORTHO05D008646 3.2e-19 99.0 106 50.0
HPP92_028512 Vanilla planifolia HOM05D006929 ORTHO05D008646 3.2e-19 99.0 106 50.0
SMO201G0152 Selaginella moellendorffii HOM05D006929 ORTHO05D008646 4.2e-19 98.6 95 46.3
SMO328G0006 Selaginella moellendorffii HOM05D006929 ORTHO05D008646 4.6e-18 95.1 93 46.2
Os03g0137400 Oryza sativa ssp. japonica HOM05D006929 ORTHO05D008646 1.3e-17 93.6 120 44.2
Zm00001eb402740 Zea mays HOM05D006929 ORTHO05D008646 1.3e-17 93.6 120 43.3
VMungo1309G0553 Vigna mungo HOM05D000375 ORTHO05D000240 4.3e-16 88.6 86 54.7
Sp7g33650 Schrenkiella parvula HOM05D006929 ORTHO05D008646 1.1e-14 84.0 113 43.4
Eucgr.I02311 Eucalyptus grandis HOM05D006929 ORTHO05D008646 2.0e-08 63.2 55 56.4
HanXRQChr14g0441731 Helianthus annuus HOM05D006929 ORTHO05D008646 2.2e-07 59.7 43 65.1


User provided reference genes

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