Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 8.7e-102 373.6 186 100.0
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 1.6e-100 369.4 186 97.3
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 2.1e-100 369.0 186 97.3
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 1.1e-99 366.7 186 96.2
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 1.8e-99 365.9 186 96.2
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 4.0e-99 364.8 186 94.6
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 4.0e-99 364.8 186 94.6
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 4.0e-99 364.8 186 94.6
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 5.2e-99 364.4 186 95.7
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 6.9e-99 364.0 186 95.2
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 9.0e-99 363.6 186 94.1
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.2e-98 363.2 186 93.5
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 1.2e-98 363.2 186 94.1
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 1.2e-98 363.2 186 95.7
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 1.2e-98 363.2 186 94.1
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 1.5e-98 362.8 186 95.2
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.5e-98 362.8 186 95.2
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.5e-98 362.8 186 95.2
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 1.5e-98 362.8 186 95.2
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 2.0e-98 362.5 186 94.6
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 2.6e-98 362.1 186 94.6
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 3.4e-98 361.7 186 94.6
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 3.4e-98 361.7 186 94.1
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 3.4e-98 361.7 186 93.5
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 3.4e-98 361.7 186 93.5
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 4.4e-98 361.3 186 94.1
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 4.4e-98 361.3 186 95.7
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 7.6e-98 360.5 186 93.5
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 7.6e-98 360.5 186 92.5
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 7.6e-98 360.5 186 93.5
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 9.9e-98 360.1 186 94.1
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 1.3e-97 359.8 186 93.0
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 1.3e-97 359.8 186 94.6
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 1.7e-97 359.4 186 93.5
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 1.7e-97 359.4 186 94.1
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 1.7e-97 359.4 186 93.5
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 2.2e-97 359.0 186 93.0
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 2.9e-97 358.6 181 96.7
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 3.8e-97 358.2 186 92.5
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 4.9e-97 357.8 186 94.1
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 4.9e-97 357.8 186 93.0
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 6.4e-97 357.5 183 95.6
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 8.4e-97 357.1 186 91.9
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 1.1e-96 356.7 186 93.0
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.1e-96 356.7 186 93.0
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.4e-96 356.3 186 92.5
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 1.9e-96 355.9 186 93.0
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 2.4e-96 355.5 199 88.4
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 2.4e-96 355.5 195 90.8
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 2.4e-96 355.5 186 92.5
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 2.4e-96 355.5 186 91.9
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 3.2e-96 355.1 186 93.0
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 3.2e-96 355.1 186 93.0
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 3.2e-96 355.1 186 91.4
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 4.2e-96 354.8 186 91.4
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 4.2e-96 354.8 186 92.5
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 5.4e-96 354.4 186 91.9
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 7.1e-96 354.0 186 92.5
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 7.1e-96 354.0 186 91.4
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 9.3e-96 353.6 186 91.9
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 9.3e-96 353.6 186 91.9
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.2e-95 353.2 186 92.5
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 1.6e-95 352.8 186 91.9
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 1.6e-95 352.8 186 92.5
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 1.6e-95 352.8 186 92.5
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 2.1e-95 352.4 186 91.9
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 2.7e-95 352.1 186 91.9
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 2.7e-95 352.1 186 91.9
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 2.7e-95 352.1 186 91.9
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 2.7e-95 352.1 186 91.9
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 2.7e-95 352.1 186 91.4
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 2.7e-95 352.1 186 89.8
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 3.5e-95 351.7 186 91.4
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 6.0e-95 350.9 186 91.9
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 7.8e-95 350.5 186 91.4
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 7.8e-95 350.5 186 91.4
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 7.8e-95 350.5 184 92.4
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 7.8e-95 350.5 186 91.4
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 7.8e-95 350.5 186 91.4
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 1.3e-94 349.7 186 90.3
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 1.7e-94 349.4 186 89.2
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 1.7e-94 349.4 186 90.3
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 1.7e-94 349.4 186 91.4
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 2.3e-94 349.0 186 90.9
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 3.0e-94 348.6 186 90.3
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 3.0e-94 348.6 186 89.8
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 3.0e-94 348.6 186 90.3
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 3.9e-94 348.2 186 90.9
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 3.9e-94 348.2 186 90.9
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 3.9e-94 348.2 186 90.3
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 6.6e-94 347.4 186 90.3
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 1.1e-93 346.7 200 86.5
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 3.3e-93 345.1 192 89.6
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 4.3e-93 344.7 186 89.8
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 5.6e-93 344.4 186 89.2
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 5.6e-93 344.4 186 90.9
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 7.3e-93 344.0 186 88.7
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 1.3e-92 343.2 186 87.6
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 2.1e-92 342.4 186 88.7
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 2.1e-92 342.4 205 83.4
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 2.8e-92 342.0 186 89.2
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 3.6e-92 341.7 186 87.1
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 8.1e-92 340.5 186 88.2
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 1.1e-91 340.1 186 87.1
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 1.1e-91 340.1 205 82.9
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 1.1e-91 340.1 181 90.1
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 1.1e-91 340.1 202 84.2
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 1.1e-91 340.1 186 87.6
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 1.1e-91 340.1 184 88.6
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 1.4e-91 339.7 186 86.0
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 2.4e-91 339.0 184 88.0
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 6.9e-91 337.4 207 82.1
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 1.2e-90 336.7 181 89.5
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 1.2e-90 336.7 181 89.5
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 4.5e-90 334.7 186 86.6
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 8.4e-89 330.5 186 86.0
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 1.4e-88 329.7 183 87.4
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 7.1e-88 327.4 185 84.3
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 1.6e-87 326.2 240 70.8
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 6.7e-86 320.9 210 78.1
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 1.1e-85 320.1 173 87.9
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 7.4e-85 317.4 167 91.0
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.1e-83 313.5 169 89.3
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 4.0e-83 311.6 184 79.9
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.1e-80 303.5 186 77.4
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.1e-80 303.5 186 77.4
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 1.4e-80 303.1 186 78.5
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 1.2e-79 300.1 186 81.7
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.1e-79 299.3 186 76.3
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.0e-78 297.0 186 79.6
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 2.3e-78 295.8 185 82.7
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 8.7e-78 293.9 154 92.2
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.5e-77 292.4 186 79.0
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 5.6e-77 291.2 171 79.5
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 5.6e-77 291.2 186 74.2
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 3.7e-76 288.5 158 88.6
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 1.4e-75 286.6 149 94.0
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 1.2e-74 283.5 179 74.3
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.0e-73 280.4 186 75.8
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 1.2e-71 273.5 186 75.8
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 1.0e-70 270.4 148 87.8
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 1.1e-69 266.9 214 62.1
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 5.9e-66 254.6 157 77.7
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 3.2e-64 248.8 186 71.0
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 2.3e-62 242.7 186 67.2
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 3.3e-61 238.8 172 63.4
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 2.8e-60 235.7 124 92.7
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 3.9e-54 215.3 133 76.7
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 2.0e-53 213.0 102 98.0
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 3.5e-50 202.2 167 56.3
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 2.2e-49 199.5 97 93.8
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 8.5e-49 197.6 106 90.6
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 1.4e-48 196.8 138 70.3
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 4.2e-48 195.3 175 54.9
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 6.7e-46 188.0 181 59.1
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.5e-45 186.8 102 84.3
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 8.2e-44 181.0 97 85.6
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 4.0e-38 162.2 85 94.1
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 3.0e-30 136.0 141 56.7
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 3.4e-21 105.9 68 70.6
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 4.1e-19 99.0 52 98.1
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 2.7e-18 96.3 52 92.3
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 6.6e-17 91.7 49 93.9
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 3.1e-14 82.8 40 95.0
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 8.9e-14 81.3 45 88.9
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 3.4e-13 79.3 47 83.0
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 2.2e-12 76.6 68 57.4
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 2.9e-12 76.3 70 61.4
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 3.7e-12 75.9 40 85.0
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 2.4e-11 73.2 39 82.1


User provided reference genes

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