Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p013066 Quercus lobata HOM05D006536 ORTHO05D005877 2.0e-68 262.3 134 100.0
QL08p012979 Quercus lobata HOM05D006536 ORTHO05D005877 2.3e-24 115.9 147 49.7
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 2.0e-23 112.8 144 42.4
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 6.4e-22 107.8 148 41.2
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 1.7e-19 99.8 143 39.9
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 9.9e-15 84.0 138 37.0
COL.COLO4_15402 Corchorus olitorius HOM05D006536 ORTHO05D005877 1.3e-14 83.6 138 37.7
CANSAT54G1080 Cannabis sativa HOM05D006536 ORTHO05D005877 6.4e-14 81.3 129 41.9
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 8.4e-14 80.9 140 40.0
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 2.4e-13 79.3 134 38.8
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 5.4e-13 78.2 144 37.5
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 4.6e-12 75.1 141 34.0
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 7.8e-12 74.3 134 33.6
Lsat_1_v5_gn_3_115460 Lactuca sativa HOM05D006536 ORTHO05D005877 1.3e-11 73.6 152 34.9
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 1.3e-11 73.6 134 33.6
COL.COLO4_09580 Corchorus olitorius HOM05D015826 ORTHO05D005877 2.3e-11 72.8 147 31.3
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 3.0e-11 72.4 144 31.9
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.1e-11 71.6 146 36.3
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 5.1e-11 71.6 146 37.0
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 5.1e-11 71.6 136 33.8
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 6.6e-11 71.2 130 36.2
Duzib268G0059 Durio zibethinus HOM05D006536 ORTHO05D005877 8.6e-11 70.9 140 32.1
Lsat_1_v5_gn_3_115400 Lactuca sativa HOM05D006536 ORTHO05D005877 1.1e-10 70.5 150 33.3
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.1e-10 70.5 142 38.7
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 1.9e-10 69.7 146 36.3
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 3.3e-10 68.9 145 29.7
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 4.3e-10 68.6 102 36.3
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 5.6e-10 68.2 103 39.8
HanXRQChr11g0337861 Helianthus annuus HOM05D006536 ORTHO05D005877 3.6e-09 65.5 104 36.5
PSO782G1199 Papaver somniferum HOM05D006536 ORTHO05D005877 3.6e-09 65.5 72 45.8
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 8.1e-09 64.3 143 37.1
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 8.1e-09 64.3 143 34.3
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.1e-08 63.9 149 34.2
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 2.4e-08 62.8 145 35.2
SHI27896 Sapria himalayana HOM05D006536 ORTHO05D005877 3.1e-08 62.4 121 33.1
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 4.0e-08 62.0 100 38.0
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 4.0e-08 62.0 104 43.3
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 1.2e-07 60.5 111 34.2
SHI26699 Sapria himalayana HOM05D006536 ORTHO05D005877 1.2e-07 60.5 121 32.2
EL10Ac4g07942 Beta vulgaris HOM05D009374 ORTHO05D005877 2.0e-07 59.7 135 31.9
CANSAT54G2394 Cannabis sativa HOM05D006536 ORTHO05D005877 2.0e-07 59.7 129 36.4
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.0e-07 59.7 141 33.3
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 2.6e-07 59.3 172 29.1
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 2.6e-07 59.3 141 32.6
CDE11G0063 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 4.4e-07 58.5 137 31.4
Eucgr.F00976 Eucalyptus grandis HOM05D006536 ORTHO05D005877 4.4e-07 58.5 142 33.8
Gohir.D05G365366 Gossypium hirsutum HOM05D015826 ORTHO05D005877 5.8e-07 58.2 131 32.8
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.8e-07 58.2 152 28.9
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.8e-07 58.2 156 28.2
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 7.6e-07 57.8 143 32.2
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 7.6e-07 57.8 155 31.0
Lsat_1_v5_gn_7_106501 Lactuca sativa HOM05D009374 ORTHO05D012864 9.9e-07 57.4 149 32.2
PGR083G1686 Punica granatum HOM05D006536 ORTHO05D005877 1.3e-06 57.0 153 34.0
TWI39G0888 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 1.3e-06 57.0 125 30.4
CAN.G981.16 Capsicum annuum HOM05D006536 ORTHO05D005877 1.7e-06 56.6 130 33.1
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 2.2e-06 56.2 140 32.1
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 2.2e-06 56.2 140 31.4
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.2e-06 56.2 143 36.4
HanXRQChr13g0408641 Helianthus annuus HOM05D009374 ORTHO05D005877 2.9e-06 55.8 147 30.6
Dinv40717 Davidia involucrata HOM05D006536 ORTHO05D005877 3.8e-06 55.5 112 38.4
QL08p013125 Quercus lobata HOM05D009374 ORTHO05D005877 3.8e-06 55.5 147 29.9
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 3.8e-06 55.5 142 31.7
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.8e-06 55.5 156 28.8
Ah.06g183000 Amaranthus hybridus HOM05D001264 ORTHO05D001167 4.9e-06 55.1 130 29.2
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 4.9e-06 55.1 156 31.4
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 6.4e-06 54.7 128 32.0
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 8.4e-06 54.3 156 32.1
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 8.4e-06 54.3 140 33.6
Sabra11G0120700 Salix brachista HOM05D006536 ORTHO05D005877 8.4e-06 54.3 154 31.2


User provided reference genes

Program Settings