Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p011085 Quercus lobata HOM05D000284 ORTHO05D337149 6.4e-59 230.3 101 100.0
Ca_26482_v3 Cicer arietinum L. HOM05D000284 ORTHO05D001229 1.8e-08 62.8 29 89.7
Gohir.A13G138700 Gossypium hirsutum HOM05D000284 ORTHO05D001229 2.3e-08 62.4 26 96.2
QL03p009918 Quercus lobata HOM05D000284 ORTHO05D001229 2.3e-08 62.4 26 96.2
QL08p011137 Quercus lobata HOM05D000284 ORTHO05D001229 2.3e-08 62.4 26 96.2
Thecc.07G041800 Theobroma cacao HOM05D000284 ORTHO05D001229 2.3e-08 62.4 26 96.2
Gohir.D13G143500 Gossypium hirsutum HOM05D000284 ORTHO05D001229 3.0e-08 62.0 26 92.3
Gorai.013G160300 Gossypium raimondii HOM05D000284 ORTHO05D001229 3.0e-08 62.0 26 92.3
MD11G1220800 Malus domestica HOM05D000284 ORTHO05D001229 5.2e-08 61.2 29 86.2
GSVIVG01037630001 Vitis vinifera HOM05D000284 ORTHO05D001229 6.7e-08 60.8 26 88.5
COL.COLO4_28226 Corchorus olitorius HOM05D000284 ORTHO05D001229 8.8e-08 60.5 26 92.3
Haze_09663 Corylus avellana HOM05D000284 ORTHO05D001229 1.1e-07 60.1 26 92.3
Dinv40747 Davidia involucrata HOM05D000284 ORTHO05D001229 1.1e-07 60.1 29 86.2
TAR629G2899 Trochodendron aralioides HOM05D000284 ORTHO05D001229 1.1e-07 60.1 29 86.2
CSS0004058 Camellia sinensis var. sinensis HOM05D000284 ORTHO05D001229 1.5e-07 59.7 29 86.2
CSS0035786 Camellia sinensis var. sinensis HOM05D000284 ORTHO05D001229 1.5e-07 59.7 29 86.2
Ca_03332_v3 Cicer arietinum L. HOM05D000284 ORTHO05D001229 1.5e-07 59.7 29 86.2
Duzib213G0963 Durio zibethinus HOM05D000284 ORTHO05D001229 1.5e-07 59.7 26 92.3
RhsimUnG0251300 Rhododendron simsii HOM05D000284 ORTHO05D001229 1.5e-07 59.7 26 92.3
TAR627G1204 Trochodendron aralioides HOM05D000284 ORTHO05D013948 1.5e-07 59.7 26 92.3
Ciclev10008345m.g Citrus clementina HOM05D000284 ORTHO05D001229 2.0e-07 59.3 26 92.3
Dinv22272 Davidia involucrata HOM05D000284 ORTHO05D001229 2.0e-07 59.3 26 88.5
Oeu020119.1 Olea europaea HOM05D000284 ORTHO05D001229 2.0e-07 59.3 26 88.5
CiPaw.11G188200 Carya illinoinensis HOM05D000284 ORTHO05D001229 2.6e-07 58.9 26 88.5
MD03G1203900 Malus domestica HOM05D000284 ORTHO05D001229 2.6e-07 58.9 25 92.0
FvH4_3g22510 Fragaria vesca HOM05D000284 ORTHO05D001229 3.3e-07 58.5 26 88.5
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 3.3e-07 58.5 26 88.5
RcHm_v2.0_Chr5g0039161 Rosa chinensis HOM05D000284 ORTHO05D001229 3.3e-07 58.5 26 88.5
TPR.G1182 Trifolium pratense HOM05D000284 ORTHO05D001229 3.3e-07 58.5 29 82.8
TPR.G22258 Trifolium pratense HOM05D000284 ORTHO05D001229 3.3e-07 58.5 29 82.8
ECA236G4593 Erigeron canadensis HOM05D000284 ORTHO05D001229 4.4e-07 58.2 29 79.3
Glyma.08G314800 Glycine max HOM05D000284 ORTHO05D001229 4.4e-07 58.2 29 79.3
Atru.chr2.3371 Acer truncatum HOM05D000284 ORTHO05D001229 5.7e-07 57.8 26 84.6
HanXRQChr15g0494341 Helianthus annuus HOM05D000284 ORTHO05D001229 5.7e-07 57.8 29 79.3
MBI02_g22106_MAGBIO Magnolia biondii HOM05D000284 ORTHO05D001229 5.7e-07 57.8 27 85.2
arahy.Tifrunner.gnm1.ann1.5CG709 Arachis hypogaea HOM05D000284 ORTHO05D001229 7.5e-07 57.4 29 79.3
arahy.Tifrunner.gnm1.ann1.F8NQNF Arachis hypogaea HOM05D000284 ORTHO05D001229 7.5e-07 57.4 29 79.3
Duzib170G0257 Durio zibethinus HOM05D000284 ORTHO05D001229 7.5e-07 57.4 26 88.5
HanXRQChr11g0336231 Helianthus annuus HOM05D000284 ORTHO05D001229 7.5e-07 57.4 29 79.3
LjContig00272g0023766 Lotus japonicus HOM05D000284 ORTHO05D001229 7.5e-07 57.4 29 82.8
Medtr5g092360 Medicago truncatula HOM05D000284 ORTHO05D001229 7.5e-07 57.4 29 79.3
CDE05G3284 Ceratophyllum demersum HOM05D000284 ORTHO05D001229 9.7e-07 57.0 26 84.6
Migut.M01773 Erythranthe guttata HOM05D000284 ORTHO05D001229 9.7e-07 57.0 29 79.3
Lalb_Chr04g0248481 Lupinus albus HOM05D000284 ORTHO05D001229 9.7e-07 57.0 29 79.3
Nn1g03564 Nelumbo nucifera HOM05D000284 ORTHO05D001229 9.7e-07 57.0 26 88.5
Oeu007585.1 Olea europaea HOM05D000284 ORTHO05D001229 9.7e-07 57.0 26 88.5
FAN25G1550 Fragaria x ananassa HOM05D000284 ORTHO05D001229 1.3e-06 56.6 25 88.0
Glyma.02G290100 Glycine max HOM05D000284 ORTHO05D001229 1.3e-06 56.6 30 76.7
Nn1g07119 Nelumbo nucifera HOM05D000284 ORTHO05D001229 1.3e-06 56.6 26 88.5
Phvul.006G041100 Phaseolus vulgaris HOM05D000284 ORTHO05D001229 1.3e-06 56.6 26 84.6
unitig_578.g16766 Utricularia gibba HOM05D000284 ORTHO05D001229 1.3e-06 56.6 29 75.9
AT3G20500 Arabidopsis thaliana HOM05D000284 ORTHO05D001229 1.7e-06 56.2 26 84.6
Carub.0003s2046 Capsella rubella HOM05D000284 ORTHO05D001229 1.7e-06 56.2 26 84.6
Prupe.4G211500 Prunus persica HOM05D000284 ORTHO05D001229 1.7e-06 56.2 25 88.0
vmacro09722 Vaccinium macrocarpon HOM05D000284 ORTHO05D001229 1.7e-06 56.2 29 79.3
Eucgr.F00772 Eucalyptus grandis HOM05D000284 ORTHO05D001229 2.2e-06 55.8 26 84.6
Eucgr.F00806 Eucalyptus grandis HOM05D000284 ORTHO05D001229 2.2e-06 55.8 26 84.6
Eucgr.F00882 Eucalyptus grandis HOM05D000284 ORTHO05D001229 2.2e-06 55.8 26 84.6
Glyma.14G024700 Glycine max HOM05D000284 ORTHO05D001229 2.2e-06 55.8 29 79.3
Lalb_Chr02g0155611 Lupinus albus HOM05D000284 ORTHO05D001229 2.2e-06 55.8 29 79.3
VMungo0540G1804 Vigna mungo HOM05D000284 ORTHO05D001229 2.2e-06 55.8 26 84.6
Phvul.008G266300 Phaseolus vulgaris HOM05D000284 ORTHO05D001229 2.8e-06 55.5 29 79.3
Psat2g013240 Pisum sativum HOM05D000284 ORTHO05D001229 2.8e-06 55.5 29 79.3
Sed0009093 Sechium edule HOM05D000284 ORTHO05D001229 2.8e-06 55.5 27 81.5
THA.LOC104817872 Tarenaya hassleriana HOM05D000284 ORTHO05D001229 2.8e-06 55.5 26 84.6
HPP92_014119 Vanilla planifolia HOM05D000284 ORTHO05D001229 2.8e-06 55.5 28 82.1
Zm00001eb048820 Zea mays HOM05D000284 ORTHO05D001229 2.8e-06 55.5 29 75.9
MSTRG.14432 Avicennia marina HOM05D000284 ORTHO05D001229 3.7e-06 55.1 26 80.8
Cpa.g.sc97.15 Carica papaya HOM05D000284 ORTHO05D001229 3.7e-06 55.1 26 84.6
FAN16G2970 Fragaria x ananassa HOM05D003876 ORTHO05D004560 3.7e-06 55.1 23 91.3
Peaxi162Scf00964g00140 Petunia axillaris HOM05D000284 ORTHO05D001229 3.7e-06 55.1 29 75.9
SGA_v2.0_scaffold258G45800 Striga asiatica HOM05D000284 ORTHO05D001229 3.7e-06 55.1 29 75.9
SGA_v2.0_scaffold258G45801 Striga asiatica HOM05D000284 ORTHO05D001229 3.7e-06 55.1 29 75.9
TPR.G16580 Trifolium pratense HOM05D000284 ORTHO05D001229 3.7e-06 55.1 26 84.6
BcaNung07078 Brassica carinata HOM05D000284 ORTHO05D001229 4.8e-06 54.7 26 84.6
A05p28340 Brassica napus HOM05D000284 ORTHO05D005845 4.8e-06 54.7 26 84.6
C05p43830 Brassica napus HOM05D000284 ORTHO05D005845 4.8e-06 54.7 26 84.6
BolC5t33099H Brassica oleracea HOM05D000284 ORTHO05D001229 4.8e-06 54.7 26 84.6
BraA05t21719Z Brassica rapa HOM05D000284 ORTHO05D001229 4.8e-06 54.7 26 84.6
CARHR096260 Cardamine hirsuta HOM05D000284 ORTHO05D001229 4.8e-06 54.7 26 84.6
Eucgr.F00774 Eucalyptus grandis HOM05D000284 ORTHO05D001229 4.8e-06 54.7 26 80.8
Eucgr.F00777 Eucalyptus grandis HOM05D000284 ORTHO05D001229 4.8e-06 54.7 26 80.8
Thhalv10020766m.g Eutrema salsugineum HOM05D000284 ORTHO05D001229 4.8e-06 54.7 26 84.6
Psat5g180720 Pisum sativum HOM05D000284 ORTHO05D001229 4.8e-06 54.7 26 84.6
Sabra16G0289100 Salix brachista HOM05D000284 ORTHO05D001229 4.8e-06 54.7 26 80.8
Actinidia35337 Actinidia chinensis HOM05D000284 ORTHO05D001229 6.3e-06 54.3 26 80.8
arahy.Tifrunner.gnm1.ann1.V6RGS7 Arachis hypogaea HOM05D000284 ORTHO05D001229 6.3e-06 54.3 26 80.8
AUR62015748 Chenopodium quinoa HOM05D000284 ORTHO05D001229 6.3e-06 54.3 29 75.9
Lsat_1_v5_gn_7_108720 Lactuca sativa HOM05D000284 ORTHO05D001229 6.3e-06 54.3 26 76.9
Lj6g0023564 Lotus japonicus HOM05D000284 ORTHO05D001229 6.3e-06 54.3 26 80.8
TWI38G0589 Tripterygium wilfordii HOM05D000284 ORTHO05D001229 6.3e-06 54.3 26 80.8
AL3G34280 Arabidopsis lyrata HOM05D000284 ORTHO05D001229 8.2e-06 53.9 26 80.8
Ca_14722_v3 Cicer arietinum L. HOM05D000284 ORTHO05D001229 8.2e-06 53.9 26 80.8
ClCG05G014340 Citrullus lanatus HOM05D000284 ORTHO05D001229 8.2e-06 53.9 27 77.8
FAN11G2639 Fragaria x ananassa HOM05D003876 ORTHO05D004560 8.2e-06 53.9 25 84.0
Lalb_Chr06g0171901 Lupinus albus HOM05D000284 ORTHO05D001229 8.2e-06 53.9 26 80.8
Nitab4.5_0001393g0130 Nicotiana tabacum HOM05D000284 ORTHO05D001229 8.2e-06 53.9 29 72.4
Nitab4.5_0004829g0020 Nicotiana tabacum HOM05D000284 ORTHO05D001229 8.2e-06 53.9 29 72.4
Sed0015659 Sechium edule HOM05D000284 ORTHO05D001229 8.2e-06 53.9 27 77.8
Hund02062 Selenicereus undatus HOM05D000284 ORTHO05D001229 8.2e-06 53.9 26 80.8


User provided reference genes

Program Settings