Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p010874 Quercus lobata HOM05D003876 ORTHO05D004560 9.2e-153 543.5 271 100.0
QL08p010959 Quercus lobata HOM05D003876 ORTHO05D004560 1.3e-61 240.7 232 61.2
QL08p010925 Quercus lobata HOM05D003876 ORTHO05D004560 2.7e-51 206.5 111 92.8
QL08p010686 Quercus lobata HOM05D003876 ORTHO05D004560 9.2e-28 128.3 66 98.5
QL08p010640 Quercus lobata HOM05D003876 ORTHO05D004560 3.5e-19 99.8 54 87.0
QL10p036392 Quercus lobata HOM05D003876 ORTHO05D004560 3.5e-19 99.8 54 87.0
QL10p036338 Quercus lobata HOM05D003876 ORTHO05D004560 6.0e-19 99.0 63 76.2
QL08p010650 Quercus lobata HOM05D003876 ORTHO05D004560 3.9e-18 96.3 54 83.3
QL11p042372 Quercus lobata HOM05D003876 ORTHO05D004560 5.1e-18 95.9 65 75.4
QL08p010601 Quercus lobata HOM05D003876 ORTHO05D004560 1.1e-17 94.7 55 81.8
CiPaw.11G188300 Carya illinoinensis HOM05D003876 ORTHO05D004560 2.1e-16 90.5 67 71.6
Prupe.4G211600 Prunus persica HOM05D003876 ORTHO05D004560 9.0e-15 85.1 90 56.7
Haze_09664 Corylus avellana HOM05D003876 ORTHO05D004560 1.5e-14 84.3 55 70.9
Atru.chr2.3354 Acer truncatum HOM05D003876 ORTHO05D004560 3.4e-14 83.2 67 64.2
Potri.001G423600 Populus trichocarpa HOM05D003876 ORTHO05D004560 4.4e-14 82.8 124 43.5
Haze_08116 Corylus avellana HOM05D003876 ORTHO05D004560 5.8e-14 82.4 51 74.5
CANSAT21G0957 Cannabis sativa HOM05D003876 ORTHO05D004560 3.5e-11 73.2 61 60.7
Manes.15G088800 Manihot esculenta HOM05D003876 ORTHO05D004560 4.6e-11 72.8 67 56.7
MD03G1202300 Malus domestica HOM05D003876 ORTHO05D004560 1.7e-10 70.9 64 62.5
RcHm_v2.0_Chr5g0039261 Rosa chinensis HOM05D003876 ORTHO05D004560 1.7e-10 70.9 55 63.6
Lj4C311T3 Lonicera japonica HOM05D003876 ORTHO05D004560 3.9e-10 69.7 51 68.6
Ciclev10007236m.g Citrus clementina HOM05D003876 ORTHO05D004560 6.6e-10 68.9 95 46.3
QL01p000742 Quercus lobata HOM05D001339 ORTHO05D003609 6.6e-10 68.9 32 93.8
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 8.7e-10 68.6 67 56.7
Hma1.2p1_1927F.1_g307790 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 8.7e-10 68.6 47 63.8
Glyma.18G096800 Glycine max HOM05D003876 ORTHO05D004560 1.1e-09 68.2 84 46.4
Dinv12032 Davidia involucrata HOM05D003876 ORTHO05D004560 1.5e-09 67.8 51 62.7
Glyma.08G316100 Glycine max HOM05D003876 ORTHO05D004560 2.5e-09 67.0 84 46.4
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 3.3e-09 66.6 47 63.8
Dinv31299 Davidia involucrata HOM05D003876 ORTHO05D004560 5.6e-09 65.9 51 60.8
TPR.G34799 Trifolium pratense HOM05D003876 ORTHO05D004560 5.6e-09 65.9 94 44.7
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea HOM05D003876 ORTHO05D004560 7.3e-09 65.5 90 46.7
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea HOM05D003876 ORTHO05D004560 1.6e-08 64.3 90 44.4
Duzib213G0609 Durio zibethinus HOM05D003876 ORTHO05D004560 2.1e-08 63.9 119 42.9
VMungo0540G1458 Vigna mungo HOM05D003876 ORTHO05D004560 2.1e-08 63.9 80 47.5
Cpa.g.sc25.33 Carica papaya HOM05D003876 ORTHO05D004560 2.8e-08 63.5 93 40.9
Lj4A310T24 Lonicera japonica HOM05D003876 ORTHO05D004560 2.8e-08 63.5 51 66.7
TWI38G0366 Tripterygium wilfordii HOM05D003876 ORTHO05D004560 4.8e-08 62.8 65 53.8
Ca_01714_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 8.1e-08 62.0 47 63.8
Lj6g0024588 Lotus japonicus HOM05D003876 ORTHO05D004560 1.1e-07 61.6 80 46.2
Sc07g0002730 Simmondsia chinensis HOM05D003876 ORTHO05D004560 1.1e-07 61.6 68 45.6
AT4G27010 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 1.4e-07 61.2 66 54.5
Lalb_Chr15g0081151 Lupinus albus HOM05D003876 ORTHO05D004560 1.4e-07 61.2 50 64.0
CSS0021387 Camellia sinensis var. sinensis HOM05D003876 ORTHO05D004560 4.0e-07 59.7 42 66.7
Hund02060 Selenicereus undatus HOM05D003876 ORTHO05D004560 4.0e-07 59.7 99 37.4
GSVIVG01037632001 Vitis vinifera HOM05D003876 ORTHO05D004560 6.9e-07 58.9 66 43.9
Eucgr.F03461 Eucalyptus grandis HOM05D003876 ORTHO05D004560 9.0e-07 58.5 54 50.0
PGR031G0089 Punica granatum HOM05D003876 ORTHO05D004560 9.0e-07 58.5 42 66.7
TAR626G1614 Trochodendron aralioides HOM05D003876 ORTHO05D004560 1.2e-06 58.2 64 48.4
Aa31LG5G10400 Aethionema arabicum HOM05D003876 ORTHO05D004560 1.5e-06 57.8 42 64.3
BcaNung03573 Brassica carinata HOM05D003876 ORTHO05D004560 2.0e-06 57.4 36 72.2
Haze_17409 Corylus avellana HOM05D001339 ORTHO05D003609 2.0e-06 57.4 31 77.4
DCAR_015293 Daucus carota HOM05D003876 ORTHO05D004560 2.0e-06 57.4 42 64.3
Ah.14g087580 Amaranthus hybridus HOM05D003876 ORTHO05D004560 3.4e-06 56.6 42 57.1
AL7G25820 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 3.4e-06 56.6 55 54.5
FvH4_3g22520 Fragaria vesca HOM05D003876 ORTHO05D004560 3.4e-06 56.6 52 53.8
FAN11G2639 Fragaria x ananassa HOM05D003876 ORTHO05D004560 3.4e-06 56.6 52 53.8
FAN16G2970 Fragaria x ananassa HOM05D003876 ORTHO05D004560 3.4e-06 56.6 55 50.9
Gorai.009G353000 Gossypium raimondii HOM05D003876 ORTHO05D004560 3.4e-06 56.6 75 49.3
Lsat_1_v5_gn_2_112761 Lactuca sativa HOM05D003876 ORTHO05D004560 3.4e-06 56.6 71 38.0
EL10Ac4g07826 Beta vulgaris HOM05D003876 ORTHO05D004560 4.5e-06 56.2 84 41.7
BcaNung03576 Brassica carinata HOM05D003876 ORTHO05D004560 5.8e-06 55.8 58 51.7
A01p18170 Brassica napus HOM05D003876 ORTHO05D004560 5.8e-06 55.8 58 51.7
C01p23130 Brassica napus HOM05D003876 ORTHO05D004560 5.8e-06 55.8 58 51.7
BolC1t02247H Brassica oleracea HOM05D003876 ORTHO05D004560 5.8e-06 55.8 58 51.7
BraA01t01772Z Brassica rapa HOM05D003876 ORTHO05D004560 5.8e-06 55.8 58 51.7
MSTRG.9162 Avicennia marina HOM05D003876 ORTHO05D004560 7.6e-06 55.5 111 32.4
Gohir.D05G329600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 7.6e-06 55.5 73 47.9
MELO3C021122.2 Cucumis melo HOM05D003876 ORTHO05D004560 9.9e-06 55.1 36 77.8
Sed0026666 Sechium edule HOM05D003876 ORTHO05D004560 9.9e-06 55.1 36 77.8


User provided reference genes

Program Settings