Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p010686 Quercus lobata HOM05D003876 ORTHO05D004560 1.2e-74 283.1 140 100.0
QL08p010874 Quercus lobata HOM05D003876 ORTHO05D004560 1.1e-27 127.1 66 98.5
QL11p042372 Quercus lobata HOM05D003876 ORTHO05D004560 1.8e-22 109.8 76 73.7
QL08p010925 Quercus lobata HOM05D003876 ORTHO05D004560 3.3e-21 105.5 56 94.6
CiPaw.11G188300 Carya illinoinensis HOM05D003876 ORTHO05D004560 8.1e-20 100.9 78 69.2
QL08p010640 Quercus lobata HOM05D003876 ORTHO05D004560 3.1e-19 99.0 64 76.6
QL10p036392 Quercus lobata HOM05D003876 ORTHO05D004560 3.1e-19 99.0 64 76.6
Atru.chr2.3354 Acer truncatum HOM05D003876 ORTHO05D004560 9.0e-19 97.4 85 61.2
Haze_09664 Corylus avellana HOM05D003876 ORTHO05D004560 1.2e-18 97.1 73 63.0
QL08p010959 Quercus lobata HOM05D003876 ORTHO05D004560 2.0e-18 96.3 50 96.0
QL08p010601 Quercus lobata HOM05D003876 ORTHO05D004560 3.4e-18 95.5 59 76.3
Prupe.4G211600 Prunus persica HOM05D003876 ORTHO05D004560 4.5e-18 95.1 83 63.9
QL08p010650 Quercus lobata HOM05D003876 ORTHO05D004560 1.0e-17 94.0 54 81.5
QL10p036338 Quercus lobata HOM05D003876 ORTHO05D004560 1.0e-17 94.0 54 81.5
Haze_08116 Corylus avellana HOM05D003876 ORTHO05D004560 2.2e-17 92.8 69 63.8
QL08p011039 Quercus lobata HOM05D003876 ORTHO05D004560 2.2e-17 92.8 67 71.6
Potri.001G423600 Populus trichocarpa HOM05D003876 ORTHO05D004560 1.1e-16 90.5 80 60.0
Manes.15G088800 Manihot esculenta HOM05D003876 ORTHO05D004560 2.5e-16 89.4 118 45.8
CANSAT21G0957 Cannabis sativa HOM05D003876 ORTHO05D004560 9.3e-16 87.4 51 82.4
Ciclev10007236m.g Citrus clementina HOM05D003876 ORTHO05D004560 4.6e-15 85.1 65 64.6
RcHm_v2.0_Chr5g0039261 Rosa chinensis HOM05D003876 ORTHO05D004560 4.6e-15 85.1 71 60.6
MD03G1202300 Malus domestica HOM05D003876 ORTHO05D004560 2.3e-14 82.8 56 71.4
Hma1.2p1_1927F.1_g307790 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 3.9e-14 82.0 91 44.0
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 6.7e-14 81.3 78 57.7
Lj4C311T3 Lonicera japonica HOM05D003876 ORTHO05D004560 8.7e-14 80.9 62 66.1
Cpa.g.sc25.33 Carica papaya HOM05D003876 ORTHO05D004560 7.4e-13 77.8 62 61.3
Thecc.07G169600 Theobroma cacao HOM05D003876 ORTHO05D004560 7.4e-13 77.8 56 67.9
Dinv12032 Davidia involucrata HOM05D003876 ORTHO05D004560 9.6e-13 77.4 62 59.7
Duzib213G0609 Durio zibethinus HOM05D003876 ORTHO05D004560 2.1e-12 76.3 146 39.7
COL.COLO4_07981 Corchorus olitorius HOM05D003876 ORTHO05D004560 4.8e-12 75.1 56 67.9
Lj4A310T24 Lonicera japonica HOM05D003876 ORTHO05D004560 4.8e-12 75.1 62 64.5
Gohir.D05G329600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 8.2e-12 74.3 54 68.5
Gorai.009G353000 Gossypium raimondii HOM05D003876 ORTHO05D004560 8.2e-12 74.3 54 68.5
Sc07g0002730 Simmondsia chinensis HOM05D003876 ORTHO05D004560 1.1e-11 73.9 62 59.7
DCAR_015293 Daucus carota HOM05D003876 ORTHO05D004560 1.8e-11 73.2 66 59.1
GSVIVG01037632001 Vitis vinifera HOM05D003876 ORTHO05D004560 1.8e-11 73.2 110 36.4
Dinv31299 Davidia involucrata HOM05D003876 ORTHO05D004560 3.1e-11 72.4 62 56.5
ClCG09G008390 Citrullus lanatus HOM05D003876 ORTHO05D004560 5.3e-11 71.6 104 43.3
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 6.9e-11 71.2 58 58.6
Sed0026666 Sechium edule HOM05D003876 ORTHO05D004560 9.0e-11 70.9 48 75.0
TAR626G1614 Trochodendron aralioides HOM05D003876 ORTHO05D004560 9.0e-11 70.9 75 49.3
Glyma.08G316100 Glycine max HOM05D003876 ORTHO05D004560 1.2e-10 70.5 52 63.5
Glyma.18G096800 Glycine max HOM05D003876 ORTHO05D004560 1.2e-10 70.5 52 65.4
Ah.14g087580 Amaranthus hybridus HOM05D003876 ORTHO05D004560 1.5e-10 70.1 53 58.5
AT4G27010 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 1.5e-10 70.1 77 53.2
FvH4_3g22520 Fragaria vesca HOM05D003876 ORTHO05D004560 1.5e-10 70.1 63 55.6
FAN11G2639 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.5e-10 70.1 63 55.6
TWI38G0366 Tripterygium wilfordii HOM05D003876 ORTHO05D004560 1.5e-10 70.1 77 51.9
EL10Ac4g07826 Beta vulgaris HOM05D003876 ORTHO05D004560 2.0e-10 69.7 86 44.2
FAN16G2970 Fragaria x ananassa HOM05D003876 ORTHO05D004560 2.0e-10 69.7 66 53.0
TPR.G34799 Trifolium pratense HOM05D003876 ORTHO05D004560 2.0e-10 69.7 62 56.5
CsaV3_7G026680 Cucumis sativus L. HOM05D003876 ORTHO05D004560 2.6e-10 69.3 101 42.6
PGR031G0089 Punica granatum HOM05D003876 ORTHO05D004560 3.4e-10 68.9 53 64.2
BcaNung03573 Brassica carinata HOM05D003876 ORTHO05D004560 4.5e-10 68.6 49 65.3
CSS0021387 Camellia sinensis var. sinensis HOM05D003876 ORTHO05D004560 7.6e-10 67.8 53 62.3
Lalb_Chr15g0081151 Lupinus albus HOM05D003876 ORTHO05D004560 7.6e-10 67.8 61 59.0
Aa31LG5G10400 Aethionema arabicum HOM05D003876 ORTHO05D004560 1.0e-09 67.4 53 60.4
AUR62015755 Chenopodium quinoa HOM05D003876 ORTHO05D004560 1.3e-09 67.0 71 45.1
Ca_01714_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 2.2e-09 66.2 57 57.9
MELO3C021122.2 Cucumis melo HOM05D003876 ORTHO05D004560 2.2e-09 66.2 104 42.3
AL7G25820 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 2.9e-09 65.9 66 53.0
BcaNung03576 Brassica carinata HOM05D003876 ORTHO05D004560 3.8e-09 65.5 69 50.7
A01p18170 Brassica napus HOM05D003876 ORTHO05D004560 3.8e-09 65.5 69 50.7
C01p23130 Brassica napus HOM05D003876 ORTHO05D004560 3.8e-09 65.5 69 50.7
BolC1t02247H Brassica oleracea HOM05D003876 ORTHO05D004560 3.8e-09 65.5 69 50.7
BraA01t01772Z Brassica rapa HOM05D003876 ORTHO05D004560 3.8e-09 65.5 69 50.7
Eucgr.F03461 Eucalyptus grandis HOM05D003876 ORTHO05D004560 3.8e-09 65.5 64 48.4
Oeu042740.2 Olea europaea HOM05D003876 ORTHO05D004560 5.0e-09 65.1 56 58.9
Lj6g0024588 Lotus japonicus HOM05D003876 ORTHO05D004560 6.5e-09 64.7 74 44.6
Hund02060 Selenicereus undatus HOM05D003876 ORTHO05D004560 6.5e-09 64.7 80 42.5
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea HOM05D003876 ORTHO05D004560 8.5e-09 64.3 46 69.6
CAN.G93.17 Capsicum annuum HOM05D003876 ORTHO05D004560 1.1e-08 63.9 62 51.6
VMungo0540G1458 Vigna mungo HOM05D003876 ORTHO05D004560 1.1e-08 63.9 48 62.5
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea HOM05D003876 ORTHO05D004560 1.4e-08 63.5 46 67.4
AUR62020460 Chenopodium quinoa HOM05D003876 ORTHO05D004560 1.4e-08 63.5 77 46.8
SalBow4G0132 Salvia bowleyana HOM05D003876 ORTHO05D004560 1.4e-08 63.5 49 59.2
SalBow4G0850 Salvia bowleyana HOM05D003876 ORTHO05D004560 1.4e-08 63.5 49 59.2
SHI26626 Sapria himalayana HOM05D003876 ORTHO05D004560 1.4e-08 63.5 77 42.9
Carub.0007s1383 Capsella rubella HOM05D003876 ORTHO05D004560 1.9e-08 63.2 46 63.0
Lsat_1_v5_gn_2_112761 Lactuca sativa HOM05D003876 ORTHO05D004560 1.9e-08 63.2 69 40.6
Rhsim03G0118500 Rhododendron simsii HOM05D003876 ORTHO05D004560 1.9e-08 63.2 54 50.0
HanXRQChr14g0456751 Helianthus annuus HOM05D003876 ORTHO05D004560 2.5e-08 62.8 53 50.9
Sp7g24970 Schrenkiella parvula HOM05D003876 ORTHO05D004560 2.5e-08 62.8 51 60.8
THA.LOC104817664 Tarenaya hassleriana HOM05D003876 ORTHO05D004560 2.5e-08 62.8 46 65.2
Medtr3g051730 Medicago truncatula HOM05D003876 ORTHO05D004560 3.2e-08 62.4 74 43.2
vmacro22462 Vaccinium macrocarpon HOM05D003876 ORTHO05D004560 3.2e-08 62.4 54 51.9
Peaxi162Scf01227g00036 Petunia axillaris HOM05D003876 ORTHO05D004560 4.2e-08 62.0 56 53.6
MSTRG.9162 Avicennia marina HOM05D003876 ORTHO05D004560 5.5e-08 61.6 51 56.9
MBI16_g24182_MAGBIO Magnolia biondii HOM05D003876 ORTHO05D004560 5.5e-08 61.6 46 65.2
Migut.D01652 Erythranthe guttata HOM05D003876 ORTHO05D004560 7.2e-08 61.2 53 52.8
Migut.F01968 Erythranthe guttata HOM05D003876 ORTHO05D004560 7.2e-08 61.2 53 52.8
HPP92_009518 Vanilla planifolia HOM05D003876 ORTHO05D004560 9.3e-08 60.8 119 33.6
Cc02_g11170 Coffea canephora HOM05D003876 ORTHO05D004560 1.6e-07 60.1 57 54.4
ECA238G2706 Erigeron canadensis HOM05D003876 ORTHO05D004560 1.6e-07 60.1 62 48.4
HPP92_009565 Vanilla planifolia HOM05D003876 ORTHO05D004560 1.6e-07 60.1 99 34.3
Nitab4.5_0000071g0230 Nicotiana tabacum HOM05D003876 ORTHO05D004560 2.1e-07 59.7 56 51.8
Thhalv10009735m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 2.7e-07 59.3 46 58.7
Sopen02g015700 Solanum pennellii HOM05D003876 ORTHO05D004560 3.6e-07 58.9 59 50.8
AL1G51930 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 4.6e-07 58.5 46 58.7
AL1G52050 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 4.6e-07 58.5 46 58.7
PSO675G8409 Papaver somniferum HOM05D003876 ORTHO05D004560 4.6e-07 58.5 55 50.9
Psat7g030440 Pisum sativum HOM05D003876 ORTHO05D004560 4.6e-07 58.5 80 46.2
CARHR229820 Cardamine hirsuta HOM05D003876 ORTHO05D004560 7.9e-07 57.8 46 60.9
Gohir.A05G328616 Gossypium hirsutum HOM05D003876 ORTHO05D004560 1.0e-06 57.4 144 33.3
PSO541G2928 Papaver somniferum HOM05D003876 ORTHO05D004560 1.0e-06 57.4 55 49.1
Thhalv10024185m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 1.3e-06 57.0 46 58.7
Zm00001eb070180 Zea mays HOM05D003876 ORTHO05D004560 1.8e-06 56.6 125 33.6
Nitab4.5_0014432g0010 Nicotiana tabacum HOM05D003876 ORTHO05D004560 2.3e-06 56.2 56 50.0
SGA_v2.0_scaffold13G06370 Striga asiatica HOM05D003876 ORTHO05D004560 3.0e-06 55.8 49 55.1


User provided reference genes

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