Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p010472 Quercus lobata HOM05D000138 ORTHO05D337495 4.1e-33 144.1 68 100.0
QL06p035893 Quercus lobata HOM05D000138 ORTHO05D000078 2.8e-18 94.7 47 97.9
QL08p031765 Quercus lobata HOM05D000138 ORTHO05D000167 1.4e-17 92.4 46 97.8
Manes.13G100600 Manihot esculenta HOM05D000138 ORTHO05D000078 1.5e-14 82.4 47 85.1
Manes.12G125500 Manihot esculenta HOM05D000138 ORTHO05D000078 5.5e-14 80.5 47 83.0
Cpa.g.sc55.15 Carica papaya HOM05D000138 ORTHO05D000078 1.2e-13 79.3 47 80.9
CiPaw.08G140800 Carya illinoinensis HOM05D000138 ORTHO05D000078 1.2e-13 79.3 47 80.9
Potri.007G011600 Populus trichocarpa HOM05D000138 ORTHO05D000078 1.2e-13 79.3 47 80.9
Haze_03884 Corylus avellana HOM05D000138 ORTHO05D000078 1.6e-13 79.0 57 71.9
CiPaw.07G046800 Carya illinoinensis HOM05D000138 ORTHO05D000078 2.1e-13 78.6 47 78.7
Sabra07G0009000 Salix brachista HOM05D000138 ORTHO05D000078 6.1e-13 77.0 53 73.6
GSVIVG01004382001 Vitis vinifera HOM05D000138 ORTHO05D000078 1.2e-11 72.8 47 74.5
ClCG10G007780 Citrullus lanatus HOM05D000138 ORTHO05D000078 3.4e-11 71.2 52 65.4
SHI21865 Sapria himalayana HOM05D000138 ORTHO05D000078 2.2e-10 68.6 47 70.2
TWI53G0559 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 2.8e-10 68.2 64 67.2
COL.COLO4_27366 Corchorus olitorius HOM05D000138 ORTHO05D000078 3.7e-10 67.8 49 75.5
Thecc.01G089400 Theobroma cacao HOM05D000138 ORTHO05D000078 3.7e-10 67.8 51 72.5
Gohir.D10G099700 Gossypium hirsutum HOM05D000138 ORTHO05D000078 6.3e-10 67.0 57 66.7
Gorai.011G109500 Gossypium raimondii HOM05D000138 ORTHO05D000078 6.3e-10 67.0 57 66.7
TWI74G0907 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 1.4e-09 65.9 50 78.0
Prupe.6G203000 Prunus persica HOM05D000138 ORTHO05D000078 2.4e-09 65.1 50 68.0
Atru.chr3.1234 Acer truncatum HOM05D000138 ORTHO05D000078 3.1e-09 64.7 51 68.6
Duzib187G0129 Durio zibethinus HOM05D000138 ORTHO05D000078 9.1e-09 63.2 49 71.4
MELO3C016413.2 Cucumis melo HOM05D000138 ORTHO05D000078 1.2e-08 62.8 45 66.7
CsaV3_3G006900 Cucumis sativus L. HOM05D000138 ORTHO05D000078 1.2e-08 62.8 45 66.7
Duzib147G0861 Durio zibethinus HOM05D000138 ORTHO05D000078 2.0e-08 62.0 49 71.4
THA.LOC104819288 Tarenaya hassleriana HOM05D000138 ORTHO05D000078 2.7e-08 61.6 57 64.9
VMungo1215G0427 Vigna mungo HOM05D000138 ORTHO05D000078 2.7e-08 61.6 48 64.6
Glyma.01G022500 Glycine max HOM05D000138 ORTHO05D000078 3.5e-08 61.2 48 64.6
Sed0012684 Sechium edule HOM05D000138 ORTHO05D000078 5.9e-08 60.5 46 67.4
CANSAT01G1546 Cannabis sativa HOM05D000138 ORTHO05D000078 7.7e-08 60.1 50 66.0
Gohir.A02G145100 Gossypium hirsutum HOM05D000138 ORTHO05D000078 7.7e-08 60.1 54 68.5
Gohir.D03G035500 Gossypium hirsutum HOM05D000138 ORTHO05D000078 7.7e-08 60.1 54 68.5
Gorai.003G037100 Gossypium raimondii HOM05D000138 ORTHO05D000078 7.7e-08 60.1 54 68.5
Gohir.A10G088200 Gossypium hirsutum HOM05D000138 ORTHO05D000078 1.3e-07 59.3 57 61.4
MD01G1040700 Malus domestica HOM05D000138 ORTHO05D000078 1.3e-07 59.3 54 61.1
BcaB01g05523 Brassica carinata HOM05D000138 ORTHO05D000078 2.3e-07 58.5 45 68.9
A03p04620 Brassica napus HOM05D000138 ORTHO05D000078 2.3e-07 58.5 45 68.9
C03p05290 Brassica napus HOM05D000138 ORTHO05D000078 2.3e-07 58.5 45 68.9
BolC3t13043H Brassica oleracea HOM05D000138 ORTHO05D000078 2.3e-07 58.5 45 68.9
BraA03t09803Z Brassica rapa HOM05D000138 ORTHO05D000078 2.3e-07 58.5 45 68.9
Lalb_Chr16g0381611 Lupinus albus HOM05D000138 ORTHO05D000078 2.3e-07 58.5 45 60.0
Aa31LG3G16640 Aethionema arabicum HOM05D000138 ORTHO05D000078 2.9e-07 58.2 56 60.7
Glyma.09G199800 Glycine max HOM05D000138 ORTHO05D000078 3.8e-07 57.8 45 64.4
AL6G21030 Arabidopsis lyrata HOM05D000138 ORTHO05D000078 5.0e-07 57.4 57 59.6
Carub.0006s0899 Capsella rubella HOM05D000138 ORTHO05D000078 5.0e-07 57.4 57 59.6
Sp6g32920 Schrenkiella parvula HOM05D000138 ORTHO05D000078 5.0e-07 57.4 57 59.6
Ciclev10025339m.g Citrus clementina HOM05D000138 ORTHO05D000078 6.6e-07 57.0 50 62.0
MD15G1310900 Malus domestica HOM05D000138 ORTHO05D000078 6.6e-07 57.0 63 55.6
Phvul.002G146400 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 8.6e-07 56.6 48 58.3
BcaC03g13314 Brassica carinata HOM05D000138 ORTHO05D000078 1.1e-06 56.2 57 57.9
A02p00510 Brassica napus HOM05D000138 ORTHO05D000078 1.1e-06 56.2 57 57.9
C02p04500 Brassica napus HOM05D000138 ORTHO05D000078 1.1e-06 56.2 57 57.9
BolC2t06410H Brassica oleracea HOM05D000138 ORTHO05D000078 1.1e-06 56.2 57 57.9
BraA02t05035Z Brassica rapa HOM05D000138 ORTHO05D000078 1.1e-06 56.2 57 57.9
AT5G10510 Arabidopsis thaliana HOM05D000138 ORTHO05D000078 1.5e-06 55.8 57 57.9
CARHR202780 Cardamine hirsuta HOM05D000138 ORTHO05D000078 1.5e-06 55.8 57 57.9
arahy.Tifrunner.gnm1.ann1.N9BW0I Arachis hypogaea HOM05D000138 ORTHO05D000078 1.9e-06 55.5 47 59.6
arahy.Tifrunner.gnm1.ann1.RWA9J9 Arachis hypogaea HOM05D000138 ORTHO05D000078 1.9e-06 55.5 47 59.6
BcaB05g21486 Brassica carinata HOM05D000138 ORTHO05D000078 2.5e-06 55.1 57 57.9
Thhalv10013081m.g Eutrema salsugineum HOM05D000138 ORTHO05D000078 2.5e-06 55.1 57 57.9
A10p27060 Brassica napus HOM05D000138 ORTHO05D000078 3.3e-06 54.7 58 56.9
C09p66750 Brassica napus HOM05D000138 ORTHO05D000078 3.3e-06 54.7 58 56.9
BolC9t59456H Brassica oleracea HOM05D000138 ORTHO05D000078 3.3e-06 54.7 58 56.9
BraA10t44758Z Brassica rapa HOM05D000138 ORTHO05D000078 3.3e-06 54.7 58 56.9
Lalb_Chr09g0325961 Lupinus albus HOM05D000138 ORTHO05D000078 9.5e-06 53.1 44 59.1


User provided reference genes

Program Settings