Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 3.6e-264 914.4 495 100.0
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 1.3e-152 543.9 533 60.4
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 8.6e-141 504.6 531 57.6
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 4.9e-136 488.8 563 55.1
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 3.8e-112 409.5 525 50.3
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 1.0e-109 401.4 497 49.3
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 9.7e-108 394.8 511 47.6
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 2.2e-104 383.6 509 52.5
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 8.5e-104 381.7 515 47.2
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 4.6e-102 375.9 515 47.2
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 1.1e-100 371.3 515 47.0
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 5.7e-100 369.0 536 44.8
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 3.7e-99 366.3 531 45.2
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 3.4e-97 359.8 515 47.8
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 1.3e-96 357.8 457 49.0
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 2.2e-96 357.1 529 45.0
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.4e-95 354.4 518 45.8
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 1.4e-95 354.4 505 44.2
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 6.1e-94 349.0 526 46.0
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.4e-93 347.8 522 43.5
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.3e-93 347.1 513 44.8
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 8.8e-93 345.1 558 42.5
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 8.8e-93 345.1 506 47.8
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 2.0e-92 344.0 512 46.1
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 3.3e-92 343.2 558 42.3
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 1.1e-90 338.2 511 46.2
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 3.1e-90 336.7 518 45.4
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 3.8e-88 329.7 526 45.2
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 7.2e-87 325.5 520 44.2
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 2.7e-86 323.6 545 43.3
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 5.2e-85 319.3 528 43.0
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 5.7e-84 315.8 547 43.0
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 4.8e-83 312.8 453 48.3
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 3.1e-82 310.1 555 41.4
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 4.1e-82 309.7 452 49.6
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 5.3e-82 309.3 413 46.2
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 5.3e-82 309.3 556 41.4
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 2.6e-81 307.0 560 40.0
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 1.0e-80 305.1 509 43.4
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 3.8e-80 303.1 511 42.9
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.5e-79 301.2 434 49.5
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 3.2e-79 300.1 505 42.8
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 4.2e-79 299.7 453 49.2
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 4.2e-79 299.7 599 39.1
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 4.7e-78 296.2 640 36.1
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 8.0e-78 295.4 520 41.5
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 5.2e-77 292.7 516 42.1
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 4.4e-76 289.7 509 40.9
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 7.5e-76 288.9 571 39.9
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 1.7e-75 287.7 513 42.3
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 1.1e-74 285.0 517 41.8
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 4.1e-74 283.1 347 50.4
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 4.1e-74 283.1 513 41.9
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 1.6e-73 281.2 504 41.1
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 1.6e-73 281.2 508 38.8
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 5.9e-73 279.3 492 39.2
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 7.7e-73 278.9 508 38.8
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 1.0e-72 278.5 517 41.0
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 2.2e-72 277.3 510 38.2
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 6.5e-72 275.8 534 37.1
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 8.5e-72 275.4 492 40.2
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 1.5e-71 274.6 495 40.2
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 7.2e-71 272.3 516 40.7
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 2.7e-70 270.4 572 39.7
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 3.6e-70 270.0 466 41.2
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 2.3e-69 267.3 353 47.9
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 1.2e-68 265.0 524 38.2
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 1.2e-68 265.0 511 40.5
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 4.4e-68 263.1 404 43.6
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 6.3e-67 259.2 602 35.0
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 1.1e-66 258.5 579 35.9
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 1.1e-66 258.5 520 38.3
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.4e-66 258.1 598 35.6
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 1.8e-66 257.7 500 37.2
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 9.1e-66 255.4 481 39.5
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 1.2e-65 255.0 514 38.5
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 2.7e-65 253.8 370 45.1
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.7e-64 251.1 467 39.2
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 1.2e-62 245.0 388 42.3
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 6.1e-62 242.7 521 36.9
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 8.0e-62 242.3 499 36.5
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 1.0e-61 241.9 520 38.1
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 2.3e-61 240.7 576 33.3
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 3.0e-61 240.4 612 34.5
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 3.0e-61 240.4 512 37.9
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 4.0e-61 240.0 402 41.3
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 1.2e-60 238.4 409 40.3
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 7.5e-60 235.7 381 42.5
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 6.3e-59 232.6 530 38.1
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 7.8e-57 225.7 361 41.6
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.7e-56 224.6 542 35.2
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 2.3e-56 224.2 549 34.8
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 3.8e-56 223.4 544 32.7
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 6.6e-56 222.6 558 33.3
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 8.6e-56 222.2 510 36.9
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.2e-52 211.8 263 47.9
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 7.5e-52 209.1 543 35.0
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 2.2e-51 207.6 662 32.5
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 6.6e-48 196.1 373 38.6
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 5.6e-47 193.0 474 34.8
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 1.2e-46 191.8 610 31.3
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 1.2e-46 191.8 610 31.3
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 4.0e-45 186.8 610 30.8
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 5.2e-45 186.4 612 30.9
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 5.8e-44 183.0 509 34.8
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 6.2e-38 162.9 505 30.5
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 4.4e-36 156.8 472 32.0
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 7.5e-36 156.0 514 31.5
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 1.7e-35 154.8 509 29.7
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 2.1e-33 147.9 666 29.7
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 3.3e-31 140.6 485 30.5
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 4.6e-25 120.2 210 39.0
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 5.1e-24 116.7 548 28.5
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 2.2e-19 101.3 244 34.0
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 3.6e-14 84.0 68 60.3
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 1.3e-11 75.5 63 55.6
FAN07G1843 Fragaria x ananassa HOM05D012998 ORTHO05D025560 6.0e-09 66.6 89 49.4
FvH4_5g03070 Fragaria vesca HOM05D012998 ORTHO05D007556 7.9e-09 66.2 89 49.4
FvH4_6g06532 Fragaria vesca HOM05D012998 ORTHO05D025560 7.9e-09 66.2 89 49.4
FAN13G1116 Fragaria x ananassa HOM05D012998 ORTHO05D025560 1.3e-08 65.5 89 48.3
QL08p007653 Quercus lobata HOM05D002273 ORTHO05D000818 3.9e-08 63.9 68 52.9
FAN02G3419 Fragaria x ananassa HOM05D012998 ORTHO05D025560 2.8e-06 57.8 89 46.1
Rhsim04G0033600 Rhododendron simsii HOM05D000945 ORTHO05D007556 6.2e-06 56.6 66 48.5
FAN22G0421 Fragaria x ananassa HOM05D012998 ORTHO05D007556 8.1e-06 56.2 89 43.8


User provided reference genes

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