Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p010303 Quercus lobata HOM05D003035 ORTHO05D006294 1.7e-122 442.6 209 100.0
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 1.6e-56 223.4 214 56.1
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 1.6e-56 223.4 214 56.1
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 3.6e-56 222.2 214 55.6
QL08p010368 Quercus lobata HOM05D003035 ORTHO05D000440 9.3e-36 154.5 219 43.4
QL08p010458 Quercus lobata HOM05D003035 ORTHO05D000440 5.6e-33 145.2 221 42.1
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 3.6e-32 142.5 220 40.5
Hma1.2p1_2464F.1_g322610 Hydrangea macrophylla HOM05D003035 ORTHO05D000440 8.1e-24 114.8 212 34.0
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.9e-20 103.6 210 33.3
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 4.2e-20 102.4 210 33.3
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.7e-19 99.8 172 33.1
QL08p002650 Quercus lobata HOM05D003035 ORTHO05D000440 3.5e-19 99.4 218 34.4
Thecc.07G037500 Theobroma cacao HOM05D003035 ORTHO05D006294 1.3e-18 97.4 139 37.4
Lj4g0012844 Lotus japonicus HOM05D003035 ORTHO05D006294 6.7e-18 95.1 198 32.3
Lj6g0023511 Lotus japonicus HOM05D003035 ORTHO05D006294 1.1e-17 94.4 201 33.3
Thecc.07G037800 Theobroma cacao HOM05D003035 ORTHO05D000440 5.7e-17 92.0 159 35.8
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 9.6e-17 91.3 155 35.5
Rhsim06G0216900 Rhododendron simsii HOM05D003035 ORTHO05D000440 3.1e-15 86.3 168 35.7
Lj5g0003869 Lotus japonicus HOM05D003035 ORTHO05D006294 5.3e-15 85.5 193 31.1
TPR.G16157 Trifolium pratense HOM05D003035 ORTHO05D000440 6.9e-15 85.1 221 29.9
Duzib268G1496 Durio zibethinus HOM05D003035 ORTHO05D000440 1.2e-14 84.3 105 40.0
TPR.G23591 Trifolium pratense HOM05D003035 ORTHO05D000440 1.3e-13 80.9 193 30.6
TPR.G30670 Trifolium pratense HOM05D003035 ORTHO05D000440 1.3e-13 80.9 199 28.1
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 2.2e-13 80.1 162 29.6
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 2.9e-13 79.7 162 29.6
Thecc.07G037700 Theobroma cacao HOM05D003035 ORTHO05D000440 3.8e-13 79.3 166 30.7
Lj6g0012948 Lotus japonicus HOM05D003035 ORTHO05D006294 8.4e-13 78.2 203 28.1
TPR.G1521 Trifolium pratense HOM05D003035 ORTHO05D000440 9.3e-12 74.7 195 27.7
TPR.G35510 Trifolium pratense HOM05D003035 ORTHO05D000440 9.3e-12 74.7 204 27.5
Lj6g0004158 Lotus japonicus HOM05D003035 ORTHO05D006294 1.0e-10 71.2 202 25.2
Lj6g0012545 Lotus japonicus HOM05D003035 ORTHO05D006294 3.0e-10 69.7 150 30.0
TPR.G1525 Trifolium pratense HOM05D003035 ORTHO05D000440 1.5e-09 67.4 173 29.5
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 7.4e-09 65.1 157 29.9
ECA248G1799 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.6e-08 63.9 197 26.9
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 2.2e-08 63.5 211 25.1
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 6.3e-08 62.0 153 27.5
Sabra15G0044900 Salix brachista HOM05D002125 ORTHO05D002105 1.1e-07 61.2 95 33.7
Thecc.07G034800 Theobroma cacao HOM05D003035 ORTHO05D000440 1.1e-07 61.2 83 41.0
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 1.4e-07 60.8 104 33.7
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 1.8e-07 60.5 138 27.5
Os09g0384900 Oryza sativa ssp. japonica HOM05D023874 ORTHO05D006294 1.8e-07 60.5 104 27.9
Sabra15G0060500 Salix brachista HOM05D002125 ORTHO05D002105 2.4e-07 60.1 95 33.7
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 4.1e-07 59.3 128 28.1
EL10Ac4g07861 Beta vulgaris HOM05D003035 ORTHO05D000440 5.3e-07 58.9 150 25.3
Sabra15G0045600 Salix brachista HOM05D002125 ORTHO05D002105 5.3e-07 58.9 97 33.0
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 6.9e-07 58.5 95 33.7
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 2.0e-06 57.0 196 24.5
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 3.4e-06 56.2 138 26.8
Nitab4.5_0001698g0100 Nicotiana tabacum HOM05D007354 ORTHO05D006294 3.4e-06 56.2 96 33.3
Ah.07g207920 Amaranthus hybridus HOM05D003035 ORTHO05D000440 5.9e-06 55.5 102 33.3
EL10Ac4g07857 Beta vulgaris HOM05D003035 ORTHO05D000440 5.9e-06 55.5 137 27.7
Haze_03686 Corylus avellana HOM05D000151 ORTHO05D000074 1.0e-05 54.7 191 26.7


User provided reference genes

Program Settings