Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 4.7e-210 734.2 346 100.0
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 4.1e-206 721.1 341 99.7
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 5.7e-200 700.7 341 97.1
QL08p010368 Quercus lobata HOM05D003035 ORTHO05D000440 1.2e-69 267.7 350 46.6
QL08p010458 Quercus lobata HOM05D003035 ORTHO05D000440 5.6e-62 242.3 338 45.0
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 3.4e-59 233.0 337 42.7
QL08p010303 Quercus lobata HOM05D003035 ORTHO05D006294 4.6e-56 222.6 214 56.1
Hma1.2p1_2464F.1_g322610 Hydrangea macrophylla HOM05D003035 ORTHO05D000440 9.0e-52 208.4 351 38.7
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.9e-46 190.7 359 36.2
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.6e-45 187.6 349 36.1
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 6.2e-45 185.7 355 35.8
Lj6g0023511 Lotus japonicus HOM05D003035 ORTHO05D006294 3.4e-43 179.9 345 36.5
Rhsim06G0216900 Rhododendron simsii HOM05D003035 ORTHO05D000440 4.6e-40 169.5 355 35.8
Lj5g0003869 Lotus japonicus HOM05D003035 ORTHO05D006294 1.0e-39 168.3 341 35.2
TPR.G23591 Trifolium pratense HOM05D003035 ORTHO05D000440 7.4e-38 162.2 338 36.1
QL08p002650 Quercus lobata HOM05D003035 ORTHO05D000440 1.1e-36 158.3 323 37.8
TPR.G16157 Trifolium pratense HOM05D003035 ORTHO05D000440 1.4e-36 157.9 352 34.9
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.3e-34 151.4 339 32.4
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 8.4e-34 148.7 337 32.6
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.2e-33 146.7 341 30.5
TPR.G1521 Trifolium pratense HOM05D003035 ORTHO05D000440 2.7e-32 143.7 341 34.9
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 2.7e-32 143.7 341 32.3
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.3e-31 140.6 335 31.3
Lj4g0012844 Lotus japonicus HOM05D003035 ORTHO05D006294 5.1e-31 139.4 338 33.1
TPR.G35510 Trifolium pratense HOM05D003035 ORTHO05D000440 5.1e-31 139.4 336 33.6
Thecc.07G037800 Theobroma cacao HOM05D003035 ORTHO05D000440 1.5e-30 137.9 340 32.6
Medtr2g020100 Medicago truncatula HOM05D003035 ORTHO05D000440 4.3e-30 136.3 334 34.1
TPR.G30670 Trifolium pratense HOM05D003035 ORTHO05D000440 7.4e-30 135.6 339 33.0
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 1.3e-29 134.8 341 31.4
TPR.G18028 Trifolium pratense HOM05D003035 ORTHO05D000440 1.6e-29 134.4 335 31.6
Lj6g0012480 Lotus japonicus HOM05D003035 ORTHO05D006294 1.4e-28 131.3 257 33.9
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 3.1e-28 130.2 343 32.1
Thecc.07G037700 Theobroma cacao HOM05D003035 ORTHO05D000440 6.9e-28 129.0 333 30.9
TPR.G1525 Trifolium pratense HOM05D003035 ORTHO05D000440 9.0e-28 128.6 336 33.0
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.6e-27 127.1 343 30.9
Thecc.07G034800 Theobroma cacao HOM05D003035 ORTHO05D000440 3.8e-26 123.2 344 29.4
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 2.5e-25 120.6 333 30.9
PSO675G7414 Papaver somniferum HOM05D003035 ORTHO05D000440 2.5e-25 120.6 378 28.6
ECA248G1799 Erigeron canadensis HOM05D008265 ORTHO05D000440 3.2e-25 120.2 326 29.8
Lj6g0004158 Lotus japonicus HOM05D003035 ORTHO05D006294 5.5e-25 119.4 324 32.7
Lj6g0012545 Lotus japonicus HOM05D003035 ORTHO05D006294 5.5e-25 119.4 292 31.5
Aqoxy5G03968 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 2.1e-24 117.5 340 28.8
PSO210G6216 Papaver somniferum HOM05D003035 ORTHO05D000440 2.7e-24 117.1 361 29.4
ECA247G0747 Erigeron canadensis HOM05D008265 ORTHO05D000440 6.0e-24 115.9 334 26.9
Thecc.07G037500 Theobroma cacao HOM05D003035 ORTHO05D006294 3.9e-23 113.2 273 34.8
PSO478G3996 Papaver somniferum HOM05D003035 ORTHO05D006294 2.5e-22 110.5 397 25.9
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 2.5e-22 110.5 342 29.2
ECA233G2298 Erigeron canadensis HOM05D008265 ORTHO05D000440 3.3e-22 110.2 348 28.4
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 3.3e-22 110.2 334 27.8
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 4.3e-22 109.8 337 28.5
EL10Ac4g07794 Beta vulgaris HOM05D003035 ORTHO05D000440 1.3e-21 108.2 353 26.9
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 1.3e-21 108.2 358 27.4
Lj6g0012948 Lotus japonicus HOM05D003035 ORTHO05D006294 1.6e-21 107.8 319 31.3
EL10As4g23465 Beta vulgaris HOM05D003035 ORTHO05D000440 2.2e-21 107.5 366 26.5
Dinv36204 Davidia involucrata HOM05D003035 ORTHO05D000440 1.1e-20 105.1 290 29.7
PSO210G2788 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-20 105.1 398 25.6
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 1.1e-20 105.1 330 27.9
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.4e-20 104.8 323 29.7
ECA248G3255 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.8e-20 104.4 341 27.3
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 2.4e-20 104.0 288 28.1
TWI38G2071 Tripterygium wilfordii HOM05D003035 ORTHO05D000440 4.1e-20 103.2 356 29.2
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.3e-20 102.8 335 29.6
PSO832G0982 Papaver somniferum HOM05D003035 ORTHO05D000440 9.0e-20 102.1 374 29.7
MBI19_g39771_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.5e-19 101.3 352 27.8
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 1.5e-19 101.3 347 29.4
Lalb_Chr23g0273461 Lupinus albus HOM05D003035 ORTHO05D000440 2.6e-19 100.5 360 28.6
PSO732G0047 Papaver somniferum HOM05D003035 ORTHO05D000440 2.6e-19 100.5 392 27.0
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 3.4e-19 100.1 361 26.3
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 4.5e-19 99.8 343 27.7
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 5.9e-19 99.4 334 26.9
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 1.0e-18 98.6 355 27.6
Duzib268G1496 Durio zibethinus HOM05D003035 ORTHO05D000440 1.7e-18 97.8 119 45.4
PSO339G0474 Papaver somniferum HOM05D003035 ORTHO05D000440 1.7e-18 97.8 384 28.6
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 1.7e-18 97.8 295 27.5
Ah.07g207920 Amaranthus hybridus HOM05D003035 ORTHO05D000440 2.2e-18 97.4 367 25.1
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 2.2e-18 97.4 334 26.6
HanXRQChr01g0025311 Helianthus annuus HOM05D008265 ORTHO05D000440 2.9e-18 97.1 272 26.5
Hund28301 Selenicereus undatus HOM05D003035 ORTHO05D000440 3.8e-18 96.7 387 26.6
Hund28302 Selenicereus undatus HOM05D003035 ORTHO05D000440 3.8e-18 96.7 387 26.6
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 5.0e-18 96.3 334 27.2
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 6.5e-18 95.9 312 28.8
PSO675G7307 Papaver somniferum HOM05D003035 ORTHO05D000440 8.5e-18 95.5 373 27.3
AUR62020446 Chenopodium quinoa HOM05D003035 ORTHO05D000440 1.1e-17 95.1 330 25.8
PSO732G0397 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-17 95.1 373 26.5
QL03p056500 Quercus lobata HOM05D001020 ORTHO05D006294 1.1e-17 95.1 47 89.4
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.9e-17 94.4 169 34.9
Aqoxy4G02343 Aquilegia oxysepala HOM05D007354 ORTHO05D006294 3.2e-17 93.6 333 30.3
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 7.2e-17 92.4 334 26.3
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 7.2e-17 92.4 364 26.4
PSO478G2495 Papaver somniferum HOM05D003035 ORTHO05D000440 7.2e-17 92.4 399 24.6
PSO210G1368 Papaver somniferum HOM05D003035 ORTHO05D000440 9.4e-17 92.0 371 25.6
PSO210G1539 Papaver somniferum HOM05D003035 ORTHO05D000440 1.2e-16 91.7 362 26.5
ECA246G1921 Erigeron canadensis HOM05D008265 ORTHO05D000440 3.6e-16 90.1 343 27.1
ECA248G2932 Erigeron canadensis HOM05D008265 ORTHO05D000440 3.6e-16 90.1 262 25.6
ECA248G1816 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.0e-15 88.6 343 26.8
Hund25016 Selenicereus undatus HOM05D003035 ORTHO05D000440 5.1e-15 86.3 375 25.9
Thecc.07G034700 Theobroma cacao HOM05D003035 ORTHO05D006294 5.1e-15 86.3 300 24.0
PSO210G3833 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-14 85.1 368 25.0
EL10Ac4g07861 Beta vulgaris HOM05D003035 ORTHO05D000440 1.5e-14 84.7 397 23.2
QL04p032674 Quercus lobata HOM05D007354 ORTHO05D006294 4.3e-14 83.2 344 27.6
MBI19_g41824_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 5.7e-14 82.8 212 27.4
Os09g0384900 Oryza sativa ssp. japonica HOM05D023874 ORTHO05D006294 9.7e-14 82.0 285 24.6
AUR62002948 Chenopodium quinoa HOM05D003035 ORTHO05D000440 1.7e-13 81.3 390 24.4
COL.COLO4_31312 Corchorus olitorius HOM05D007354 ORTHO05D006294 2.8e-13 80.5 315 24.1
TPR.G35523 Trifolium pratense HOM05D003035 ORTHO05D000440 2.8e-13 80.5 190 34.7
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 1.1e-12 78.6 302 24.2
QL07p042575 Quercus lobata HOM05D007354 ORTHO05D006294 1.1e-12 78.6 336 25.3
ECA248G3232 Erigeron canadensis HOM05D001491 ORTHO05D001443 1.4e-12 78.2 374 24.1
Duzib213G0702 Durio zibethinus HOM05D003035 ORTHO05D000440 4.1e-12 76.6 124 42.7
HanXRQChr02g0049531 Helianthus annuus HOM05D008265 ORTHO05D000440 4.1e-12 76.6 309 24.3
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 6.9e-12 75.9 370 22.4
Potri.009G078900 Populus trichocarpa HOM05D007794 ORTHO05D009810 9.1e-12 75.5 249 25.7
QL07p042502 Quercus lobata HOM05D007354 ORTHO05D006294 9.1e-12 75.5 339 26.3
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.2e-11 75.1 175 27.4
PSO210G4420 Papaver somniferum HOM05D003035 ORTHO05D000440 1.5e-11 74.7 354 24.9
PSO017G5637 Papaver somniferum HOM05D003035 ORTHO05D000440 3.4e-11 73.6 307 28.0
PSO832G1081 Papaver somniferum HOM05D003035 ORTHO05D000440 3.4e-11 73.6 121 38.0
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 4.5e-11 73.2 281 27.0
Peaxi162Scf00003g03421 Petunia axillaris HOM05D007354 ORTHO05D006294 1.0e-10 72.0 210 28.6
TAR627G1148 Trochodendron aralioides HOM05D003035 ORTHO05D000440 1.0e-10 72.0 145 30.3
TAR369G0060 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.2e-10 70.9 328 25.3
PSO210G0865 Papaver somniferum HOM05D003035 ORTHO05D000440 2.9e-10 70.5 357 23.2
MBI19_g34542_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.8e-10 70.1 220 25.9
Nitab4.5_0006554g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 5.0e-10 69.7 124 37.9
Hund25002 Selenicereus undatus HOM05D003035 ORTHO05D000440 5.0e-10 69.7 195 26.7
PSO017G2999 Papaver somniferum HOM05D001286 ORTHO05D000440 6.5e-10 69.3 306 26.5
QL04p042649 Quercus lobata HOM05D007354 ORTHO05D006294 6.5e-10 69.3 141 34.8
vmacro19720 Vaccinium macrocarpon HOM05D001286 ORTHO05D000440 6.5e-10 69.3 313 26.5
TAR369G0746 Trochodendron aralioides HOM05D001286 ORTHO05D000440 8.5e-10 68.9 284 24.6
ECA248G3033 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.1e-09 68.6 255 24.3
PSO541G0577 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-09 68.6 119 36.1
PGSC0003DMG400044861 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.4e-09 68.2 128 38.3
TPR.G13451 Trifolium pratense HOM05D003035 ORTHO05D000440 1.4e-09 68.2 99 39.4
TAR369G0559 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.9e-09 67.8 284 24.3
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 2.5e-09 67.4 369 22.5
ECA248G2686 Erigeron canadensis HOM05D008265 ORTHO05D000440 3.2e-09 67.0 263 25.1
Sopen09g004080 Solanum pennellii HOM05D007354 ORTHO05D006294 3.2e-09 67.0 133 33.8
Lj2C486T7 Lonicera japonica HOM05D000151 ORTHO05D000074 4.2e-09 66.6 358 25.1
Thecc.05G212300 Theobroma cacao HOM05D007354 ORTHO05D006294 4.2e-09 66.6 270 25.2
Sopen09g005010 Solanum pennellii HOM05D009171 ORTHO05D006294 5.5e-09 66.2 127 32.3
Sabra09G0060800 Salix brachista HOM05D007794 ORTHO05D009810 7.2e-09 65.9 247 24.3
Sopen01g005370 Solanum pennellii HOM05D002754 ORTHO05D003271 7.2e-09 65.9 133 33.8
Migut.K01312 Erythranthe guttata HOM05D011758 ORTHO05D006294 1.2e-08 65.1 336 24.7
Rhsim05G0099600 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.6e-08 64.7 273 26.0
PSO541G3079 Papaver somniferum HOM05D003035 ORTHO05D000440 2.1e-08 64.3 299 24.7
Os03g0779000 Oryza sativa ssp. japonica HOM05D023874 ORTHO05D013619 3.6e-08 63.5 239 27.2
Nitab4.5_0000025g0120 Nicotiana tabacum HOM05D000151 ORTHO05D000074 4.7e-08 63.2 299 23.7
PSO782G4624 Papaver somniferum HOM05D003035 ORTHO05D000440 4.7e-08 63.2 130 36.9
Thecc.07G037000 Theobroma cacao HOM05D003035 ORTHO05D006294 4.7e-08 63.2 114 35.1
PGSC0003DMG400006262 Solanum tuberosum HOM05D007354 ORTHO05D006294 6.1e-08 62.8 334 24.0
PGSC0003DMG400002709 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.0e-07 62.0 121 34.7
vmacro00480 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 1.8e-07 61.2 273 25.3
Zm00001eb274490 Zea mays HOM05D012622 ORTHO05D013619 1.8e-07 61.2 302 22.5
PSO675G1647 Papaver somniferum HOM05D003035 ORTHO05D000440 2.3e-07 60.8 259 28.2
PSO801G0380 Papaver somniferum HOM05D003035 ORTHO05D006294 2.3e-07 60.8 98 34.7
Zm00001eb274580 Zea mays HOM05D012622 ORTHO05D013619 2.3e-07 60.8 307 21.8
Zm00001eb442270 Zea mays HOM05D012622 ORTHO05D013619 2.3e-07 60.8 307 21.8
Aqoxy3G03018 Aquilegia oxysepala HOM05D007794 ORTHO05D009810 3.0e-07 60.5 128 28.1
Rhsim05G0099400 Rhododendron simsii HOM05D007794 ORTHO05D009810 3.0e-07 60.5 260 23.5
Zm00001eb173740 Zea mays HOM05D012622 ORTHO05D013619 3.0e-07 60.5 281 22.8
Aqoxy6G01684 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 3.9e-07 60.1 206 29.1
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.1e-07 59.7 378 25.9
MBI19_g29860_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 6.7e-07 59.3 181 24.9
Sopen09g004110 Solanum pennellii HOM05D007354 ORTHO05D006294 6.7e-07 59.3 119 36.1
AUR62034240 Chenopodium quinoa HOM05D003035 ORTHO05D009623 8.8e-07 58.9 300 24.0
ECA248G0149 Erigeron canadensis HOM05D008265 ORTHO05D000440 8.8e-07 58.9 215 25.1
Sopen09g004020 Solanum pennellii HOM05D000358 ORTHO05D006294 8.8e-07 58.9 119 33.6
Sabra15G0044900 Salix brachista HOM05D002125 ORTHO05D002105 1.1e-06 58.5 98 34.7
Zm00001eb274510 Zea mays HOM05D012622 ORTHO05D013619 1.1e-06 58.5 308 22.1
Nitab4.5_0001698g0100 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.5e-06 58.2 195 23.1
Dinv01675 Davidia involucrata HOM05D000151 ORTHO05D000074 2.6e-06 57.4 353 22.1
MD13G1117600 Malus domestica HOM05D000151 ORTHO05D000074 4.4e-06 56.6 307 24.4
QL07p041321 Quercus lobata HOM05D007354 ORTHO05D006294 4.4e-06 56.6 237 24.1
PGSC0003DMG400046284 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.4e-06 56.6 146 24.7
PSO210G4675 Papaver somniferum HOM05D003035 ORTHO05D000440 5.7e-06 56.2 252 27.8
PSO541G1699 Papaver somniferum HOM05D003035 ORTHO05D000440 5.7e-06 56.2 116 26.7
Lj2P494T20 Lonicera japonica HOM05D000151 ORTHO05D000074 7.4e-06 55.8 393 23.7
PSO675G8679 Papaver somniferum HOM05D003035 ORTHO05D000440 7.4e-06 55.8 260 26.9
Sopen09g004010 Solanum pennellii HOM05D007354 ORTHO05D006294 7.4e-06 55.8 119 32.8


User provided reference genes

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