Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 3.5e-225 784.6 398 100.0
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 4.8e-174 614.8 398 78.6
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 1.3e-168 596.7 391 78.8
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 2.5e-159 565.8 367 79.0
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 3.3e-151 538.9 394 68.0
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 1.1e-149 533.9 390 68.7
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 1.4e-149 533.5 393 68.4
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 1.2e-148 530.4 396 67.9
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 1.2e-148 530.4 398 67.6
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 1.7e-147 526.6 398 67.8
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 2.5e-146 522.7 391 67.3
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 2.5e-146 522.7 391 67.3
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 3.2e-146 522.3 389 67.6
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 2.6e-143 512.7 398 66.1
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 4.5e-140 501.9 392 64.8
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 7.7e-140 501.1 392 64.8
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 5.0e-139 498.4 400 64.0
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 4.2e-138 495.4 406 63.1
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 3.0e-136 489.2 400 64.5
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 5.7e-135 485.0 401 60.6
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 9.7e-135 484.2 394 62.2
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 1.3e-134 483.8 397 61.7
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.4e-133 480.3 394 63.5
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 5.3e-133 478.4 400 61.2
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 7.7e-132 474.6 402 62.4
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 7.7e-132 474.6 400 60.2
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 1.9e-130 469.9 394 62.4
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 4.2e-130 468.8 398 59.8
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 3.6e-129 465.7 394 61.9
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 6.1e-129 464.9 405 59.3
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 6.1e-129 464.9 398 59.5
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 6.1e-129 464.9 395 60.0
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 1.4e-128 463.8 398 60.3
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 1.8e-128 463.4 397 61.5
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 2.0e-127 459.9 401 58.4
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 2.0e-127 459.9 395 59.5
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 5.7e-127 458.4 395 61.5
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 5.7e-127 458.4 394 61.2
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 9.7e-127 457.6 392 61.7
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 1.3e-126 457.2 394 58.6
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 1.7e-126 456.8 398 58.0
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 5.0e-123 445.3 399 58.4
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 1.1e-122 444.1 400 61.0
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 2.5e-122 443.0 393 59.3
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 4.2e-122 442.2 390 56.9
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 1.6e-121 440.3 394 58.6
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 3.6e-121 439.1 390 57.4
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 4.7e-121 438.7 390 56.4
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 1.0e-120 437.6 408 58.1
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 1.8e-120 436.8 340 62.9
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 3.0e-120 436.0 390 56.4
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 8.8e-120 434.5 396 58.6
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 2.6e-119 433.0 368 61.7
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 3.4e-119 432.6 394 57.1
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 7.5e-119 431.4 396 56.3
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 1.7e-118 430.3 398 56.3
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 3.7e-118 429.1 399 56.6
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 6.3e-118 428.3 399 56.4
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 1.8e-117 426.8 394 56.6
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 2.4e-117 426.4 396 55.6
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 3.1e-117 426.0 394 56.9
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 4.1e-117 425.6 394 55.8
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 7.0e-117 424.9 392 54.8
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 1.6e-116 423.7 355 58.3
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 2.0e-116 423.3 393 56.2
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 2.7e-116 422.9 345 63.5
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 3.5e-116 422.5 398 56.0
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 5.9e-116 421.8 409 54.0
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 1.0e-115 421.0 368 59.2
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 3.8e-115 419.1 318 66.7
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 8.6e-115 417.9 389 54.5
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 4.2e-114 415.6 398 55.5
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.6e-113 413.7 391 57.3
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 4.7e-113 412.1 396 54.5
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 1.4e-109 400.6 397 54.7
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 1.2e-108 397.5 394 52.5
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 1.6e-108 397.1 321 66.0
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 1.0e-107 394.4 385 54.0
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 1.7e-107 393.7 319 60.8
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 5.0e-107 392.1 346 59.0
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 6.4e-102 375.2 349 56.4
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 3.5e-100 369.4 394 51.8
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 3.0e-99 366.3 420 46.7
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 1.2e-97 360.9 266 68.4
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 6.2e-97 358.6 318 58.5
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 1.4e-93 347.4 314 57.3
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 1.4e-93 347.4 298 60.1
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 9.2e-93 344.7 290 57.9
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 3.7e-86 322.8 239 65.7
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 3.7e-86 322.8 292 57.9
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 5.1e-83 312.4 268 59.3
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 8.9e-80 301.6 293 52.6
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 5.4e-77 292.4 408 42.6
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 4.2e-69 266.2 375 41.3
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 5.5e-61 239.2 233 54.1
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 4.6e-60 236.1 215 56.3
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 1.8e-56 224.2 218 53.7
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 4.5e-55 219.5 233 53.6
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 9.6e-50 201.8 288 41.3
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.4e-45 188.0 292 39.7
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 2.5e-45 187.2 400 33.0
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 3.1e-40 170.2 200 46.0
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 1.1e-37 161.8 366 32.0
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 6.1e-36 156.0 236 41.5
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.0e-27 128.6 100 68.0
RcHm_v2.0_Chr4g0424981 Rosa chinensis HOM05D007013 ORTHO05D008999 2.0e-26 124.4 92 65.2
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.7e-22 111.3 134 44.0
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 5.0e-14 83.2 101 44.6
SEGI_13858 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 5.2e-11 73.2 93 39.8
Zm00001eb030810 Zea mays HOM05D007013 ORTHO05D008999 3.4e-10 70.5 94 42.6
Rhsim06G0218700 Rhododendron simsii HOM05D007013 ORTHO05D008999 1.7e-09 68.2 67 52.2
Medtr0152s0050 Medicago truncatula HOM05D007013 ORTHO05D008999 3.1e-08 63.9 70 45.7


User provided reference genes

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