Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 1.6e-205 719.2 350 100.0
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 6.8e-100 368.2 332 61.4
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 1.2e-99 367.5 322 60.6
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 4.4e-99 365.5 330 59.7
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 7.6e-99 364.8 310 63.5
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 1.7e-98 363.6 323 60.7
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 3.2e-97 359.4 335 56.7
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 1.2e-96 357.5 327 58.1
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 1.2e-96 357.5 322 59.3
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 1.6e-96 357.1 323 60.4
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 2.7e-96 356.3 325 57.5
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 3.5e-96 355.9 299 63.2
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 4.6e-96 355.5 317 60.3
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 7.8e-96 354.8 334 61.1
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 1.0e-95 354.4 331 57.7
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 5.1e-95 352.1 330 57.0
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 6.6e-95 351.7 325 60.6
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 8.7e-95 351.3 329 58.1
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 1.9e-94 350.1 335 55.2
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 5.6e-94 348.6 325 57.2
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 1.6e-93 347.1 307 62.2
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 2.1e-93 346.7 332 58.7
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 1.1e-92 344.4 329 56.2
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 2.4e-92 343.2 310 58.1
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 4.0e-92 342.4 322 57.1
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 5.3e-92 342.0 316 57.9
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 9.0e-92 341.3 327 58.4
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 1.5e-91 340.5 312 57.4
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 1.5e-91 340.5 329 55.0
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 2.0e-91 340.1 329 55.0
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 2.6e-91 339.7 333 54.7
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 3.4e-91 339.3 336 56.2
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 4.4e-91 339.0 195 85.6
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 2.2e-90 336.7 323 57.3
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 3.8e-90 335.9 188 85.6
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 8.4e-90 334.7 303 57.4
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 1.4e-89 334.0 322 56.2
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 4.2e-89 332.4 317 58.4
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 4.2e-89 332.4 324 58.3
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 3.5e-88 329.3 318 55.3
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 4.6e-88 328.9 355 51.8
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 4.6e-88 328.9 348 54.3
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 3.0e-87 326.2 330 56.7
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 3.9e-87 325.9 330 54.5
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 1.1e-86 324.3 306 57.5
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 5.6e-86 322.0 330 53.3
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 1.3e-85 320.9 174 87.9
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 2.1e-85 320.1 288 58.7
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 2.8e-85 319.7 312 56.1
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 3.6e-85 319.3 323 55.4
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 3.6e-85 319.3 306 57.5
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 8.1e-85 318.2 288 58.7
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 1.1e-84 317.8 319 55.5
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 1.4e-84 317.4 323 55.4
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 4.0e-84 315.8 324 56.5
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 4.0e-84 315.8 305 55.4
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 9.0e-84 314.7 304 54.9
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 1.2e-83 314.3 298 56.7
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 1.9e-81 307.0 197 75.1
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 2.4e-81 306.6 293 56.7
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 2.4e-81 306.6 182 76.9
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 3.2e-81 306.2 337 52.5
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 1.2e-80 304.3 175 82.9
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 6.0e-80 302.0 179 79.9
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 3.0e-79 299.7 312 54.5
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 6.7e-79 298.5 318 55.0
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 6.7e-79 298.5 180 77.2
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 8.7e-79 298.1 178 78.7
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 1.1e-78 297.7 173 80.3
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 1.5e-78 297.4 174 81.6
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 1.5e-78 297.4 200 70.5
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 5.6e-78 295.4 177 76.8
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 5.6e-78 295.4 171 81.9
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 5.6e-78 295.4 172 79.1
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 7.4e-78 295.0 309 53.4
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 1.3e-77 294.3 194 74.2
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 1.6e-77 293.9 189 74.6
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 2.1e-77 293.5 273 57.1
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 2.8e-77 293.1 189 74.1
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 8.1e-77 291.6 195 70.8
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 1.8e-76 290.4 177 75.7
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 6.9e-76 288.5 177 74.6
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 6.9e-76 288.5 177 75.7
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 6.9e-76 288.5 189 72.5
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 9.0e-76 288.1 175 74.9
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 1.5e-75 287.3 176 75.6
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 4.5e-75 285.8 177 74.6
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 4.5e-75 285.8 177 74.6
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 4.5e-75 285.8 177 74.6
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 2.2e-74 283.5 177 74.0
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 2.2e-74 283.5 162 83.3
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 3.5e-72 276.2 181 72.9
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 4.3e-70 269.2 262 57.6
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 1.4e-68 264.2 299 52.2
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 6.9e-68 261.9 174 70.1
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 2.6e-67 260.0 174 70.1
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 1.0e-63 248.1 144 79.2
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 5.3e-60 235.7 191 65.4
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 6.5e-58 228.8 130 81.5
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 3.2e-57 226.5 177 60.5
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 2.8e-53 213.4 136 77.9
Cfa020073 Carpinus fangiana HOM05D005997 ORTHO05D008323 6.3e-53 212.2 124 85.5
CSS0016170 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.8e-52 210.7 134 77.6
CSS0047434 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.8e-52 210.7 134 77.6
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 9.4e-41 171.8 197 50.3
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 2.3e-39 167.2 174 47.1
Atru.chr7.2230 Acer truncatum HOM05D005997 ORTHO05D008323 1.1e-38 164.9 97 81.4
Atru.chr7.2351 Acer truncatum HOM05D005997 ORTHO05D008323 1.1e-38 164.9 97 81.4
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 3.3e-38 163.3 174 46.0
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 3.7e-37 159.8 187 46.0
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 8.2e-37 158.7 176 50.6
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 1.1e-36 158.3 90 81.1
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 3.5e-35 153.3 178 44.9
Prupe.4G230300 Prunus persica HOM05D005997 ORTHO05D008323 2.0e-30 137.5 106 67.9
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 7.0e-28 129.0 194 41.8
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 9.1e-28 128.6 92 65.2
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 4.2e-25 119.8 122 56.6
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 4.2e-25 119.8 122 56.6
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 1.0e-23 115.2 119 58.0
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 2.6e-22 110.5 64 75.0
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 6.3e-21 105.9 61 77.0
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.2e-19 101.7 49 91.8
CSS0044071 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 7.7e-19 99.0 56 82.1
QL08p004281 Quercus lobata HOM05D005997 ORTHO05D007626 1.5e-17 94.7 113 54.9
CSS0025137 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 6.1e-16 89.4 57 77.2
QL08p004325 Quercus lobata HOM05D005997 ORTHO05D337094 3.0e-15 87.0 112 51.8
QL11p054366 Quercus lobata HOM05D005997 ORTHO05D338109 3.0e-15 87.0 112 51.8
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 2.4e-12 77.4 196 34.2
Rhsim03G0100400 Rhododendron simsii HOM05D005997 ORTHO05D338268 4.3e-09 66.6 43 74.4
Lsat_1_v5_gn_8_39280 Lactuca sativa HOM05D005997 ORTHO05D230963 7.3e-09 65.9 48 60.4
QL08p004656 Quercus lobata HOM05D005997 ORTHO05D337365 6.1e-08 62.8 35 85.7
arahy.Tifrunner.gnm1.ann1.U3B0HF Arachis hypogaea HOM05D003842 ORTHO05D026908 8.0e-08 62.4 36 83.3
QL08p004295 Quercus lobata HOM05D000384 ORTHO05D007626 2.6e-06 57.4 62 48.4
SalBow1G1243 Salvia bowleyana HOM05D000450 ORTHO05D000327 5.8e-06 56.2 193 29.5


User provided reference genes

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