Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 2.3e-57 225.3 110 100.0
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 1.4e-46 189.5 110 84.5
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 7.0e-35 150.6 81 87.7
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 6.4e-28 127.5 81 71.6
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 6.4e-28 127.5 81 71.6
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 1.2e-26 123.2 81 69.1
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 3.5e-26 121.7 81 65.4
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 3.5e-26 121.7 81 67.9
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 4.6e-26 121.3 81 67.9
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 2.3e-25 119.0 81 69.1
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 3.0e-25 118.6 81 63.0
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 6.6e-25 117.5 81 64.2
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 6.6e-25 117.5 81 61.7
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 8.6e-25 117.1 81 65.4
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 8.6e-25 117.1 81 61.7
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 1.1e-24 116.7 81 66.7
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 1.1e-24 116.7 81 64.2
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 1.9e-24 115.9 81 63.0
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 2.5e-24 115.5 81 60.5
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 4.3e-24 114.8 81 61.7
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 4.3e-24 114.8 81 61.7
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 4.3e-24 114.8 81 64.2
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 5.6e-24 114.4 81 64.2
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 5.6e-24 114.4 81 64.2
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 7.3e-24 114.0 81 61.7
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 7.3e-24 114.0 81 61.7
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 7.3e-24 114.0 81 64.2
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 9.5e-24 113.6 81 60.5
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.2e-23 113.2 81 63.0
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 1.2e-23 113.2 81 64.2
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 1.6e-23 112.8 81 60.5
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 1.6e-23 112.8 81 61.7
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 2.1e-23 112.5 81 61.7
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.8e-23 112.1 81 59.3
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 3.6e-23 111.7 81 63.0
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 3.6e-23 111.7 81 59.3
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 4.7e-23 111.3 81 58.0
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 4.7e-23 111.3 81 58.0
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 1.1e-22 110.2 81 56.8
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 1.1e-22 110.2 81 58.0
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.1e-22 110.2 81 64.2
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 1.1e-22 110.2 81 64.2
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 1.1e-22 110.2 81 61.7
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 1.4e-22 109.8 81 61.7
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 1.4e-22 109.8 81 61.7
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 1.4e-22 109.8 81 56.8
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.4e-22 109.8 81 58.0
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 1.8e-22 109.4 81 56.8
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 1.8e-22 109.4 81 58.0
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 2.4e-22 109.0 81 59.3
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 3.1e-22 108.6 81 60.5
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 3.1e-22 108.6 81 61.7
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 5.2e-22 107.8 81 59.3
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 5.2e-22 107.8 81 54.3
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 6.8e-22 107.5 81 54.3
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 6.8e-22 107.5 81 58.0
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 8.9e-22 107.1 81 59.3
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 1.2e-21 106.7 81 59.3
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 1.2e-21 106.7 81 59.3
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 1.2e-21 106.7 81 59.3
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 1.2e-21 106.7 81 59.3
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 1.5e-21 106.3 81 59.3
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 1.5e-21 106.3 81 59.3
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 1.5e-21 106.3 81 51.9
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 2.0e-21 105.9 81 59.3
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 2.6e-21 105.5 81 56.8
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 2.6e-21 105.5 81 58.0
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 2.6e-21 105.5 81 58.0
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 2.6e-21 105.5 81 58.0
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 2.6e-21 105.5 81 58.0
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 3.4e-21 105.1 81 56.8
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 4.4e-21 104.8 81 53.1
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 5.8e-21 104.4 81 59.3
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 9.9e-21 103.6 81 56.8
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 9.9e-21 103.6 81 59.3
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 9.9e-21 103.6 81 58.0
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 1.7e-20 102.8 81 53.1
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 1.7e-20 102.8 75 60.0
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 2.2e-20 102.4 81 53.1
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 2.2e-20 102.4 81 56.8
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 2.2e-20 102.4 81 56.8
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 2.2e-20 102.4 81 56.8
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 2.9e-20 102.1 81 56.8
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 2.9e-20 102.1 81 56.8
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 2.9e-20 102.1 81 56.8
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 2.9e-20 102.1 81 48.1
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 4.9e-20 101.3 81 50.6
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.9e-20 101.3 81 50.6
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 4.9e-20 101.3 81 55.6
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 4.9e-20 101.3 81 55.6
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 4.9e-20 101.3 81 54.3
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 6.4e-20 100.9 81 55.6
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 6.4e-20 100.9 81 55.6
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 6.4e-20 100.9 81 55.6
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 8.4e-20 100.5 81 54.3
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 8.4e-20 100.5 76 60.5
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.1e-19 100.1 81 55.6
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 1.9e-19 99.4 81 58.0
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 1.9e-19 99.4 81 55.6
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 3.2e-19 98.6 85 54.1
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.2e-19 98.6 81 58.0
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 5.4e-19 97.8 69 60.9
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 7.1e-19 97.4 81 56.8
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 9.2e-19 97.1 81 53.1
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 9.2e-19 97.1 81 51.9
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 1.2e-18 96.7 81 53.1
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 1.2e-18 96.7 87 52.9
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.6e-18 96.3 81 48.1
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.6e-18 96.3 81 48.1
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 2.1e-18 95.9 81 54.3
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 4.6e-18 94.7 81 55.6
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 4.6e-18 94.7 81 53.1
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 6.0e-18 94.4 81 54.3
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.0e-17 93.6 81 54.3
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 1.3e-17 93.2 87 50.6
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 2.3e-17 92.4 81 51.9
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.3e-17 92.4 81 49.4
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 3.0e-17 92.0 77 55.8
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.9e-17 91.7 81 51.9
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 3.9e-17 91.7 81 54.3
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.9e-17 91.7 81 48.1
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 8.7e-17 90.5 81 51.9
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 8.7e-17 90.5 81 54.3
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 1.1e-16 90.1 81 49.4
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.1e-16 90.1 81 50.6
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 1.5e-16 89.7 81 50.6
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.9e-16 89.4 81 50.6
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 3.3e-16 88.6 81 51.9
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 5.6e-16 87.8 81 50.6
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 9.6e-16 87.0 81 48.1
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 1.2e-15 86.7 78 46.2
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 1.6e-15 86.3 81 48.1
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.6e-15 86.3 81 51.9
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 1.6e-15 86.3 69 52.2
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 1.6e-15 86.3 81 48.1
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 2.8e-15 85.5 81 49.4
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 3.6e-15 85.1 82 50.0
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 6.2e-15 84.3 81 46.9
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 1.8e-14 82.8 81 46.9
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 2.4e-14 82.4 88 46.6
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 6.9e-14 80.9 81 45.7
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 9.0e-14 80.5 118 32.2
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 2.6e-13 79.0 81 45.7
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 3.4e-13 78.6 68 55.9
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 9.9e-13 77.0 50 60.0
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 1.3e-12 76.6 81 40.7
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 2.2e-12 75.9 81 46.9
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 2.2e-12 75.9 81 40.7
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 3.8e-12 75.1 81 42.0
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 3.8e-12 75.1 81 42.0
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 4.9e-12 74.7 57 54.4
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 4.9e-12 74.7 81 40.7
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.9e-11 72.8 81 38.3
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 3.2e-11 72.0 81 40.7
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 9.3e-11 70.5 81 39.5
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 3.9e-09 65.1 81 39.5
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 1.5e-08 63.2 90 36.7
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 2.5e-08 62.4 87 37.9
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 4.3e-08 61.6 80 36.2
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 4.3e-08 61.6 81 34.6
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.1e-06 57.0 81 35.8
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 9.0e-06 53.9 38 60.5


User provided reference genes

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