Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p005860 Quercus lobata HOM05D001017 ORTHO05D024852 5.4e-81 304.3 156 100.0
QL01p029004 Quercus lobata HOM05D001017 ORTHO05D001025 2.7e-32 142.5 85 87.1
COL.COLO4_19082 Corchorus olitorius HOM05D001017 ORTHO05D001025 6.7e-31 137.9 85 82.4
Cfa011629 Carpinus fangiana HOM05D001017 ORTHO05D001025 8.8e-31 137.5 85 83.5
Thecc.09G308200 Theobroma cacao HOM05D001017 ORTHO05D001025 1.1e-30 137.1 85 82.4
CiPaw.13G083700 Carya illinoinensis HOM05D001017 ORTHO05D001025 1.5e-30 136.7 85 82.4
Duzib168G1280 Durio zibethinus HOM05D001017 ORTHO05D001025 3.3e-30 135.6 85 81.2
Ciclev10028351m.g Citrus clementina HOM05D001017 ORTHO05D001025 9.7e-30 134.0 85 82.4
Duzib170G0216 Durio zibethinus HOM05D001017 ORTHO05D001025 1.3e-29 133.7 85 77.6
Eucgr.J01952 Eucalyptus grandis HOM05D001017 ORTHO05D001025 1.3e-29 133.7 85 80.0
Manes.01G165700 Manihot esculenta HOM05D001017 ORTHO05D001025 3.7e-29 132.1 86 82.6
vmacro03003 Vaccinium macrocarpon HOM05D001017 ORTHO05D001025 3.7e-29 132.1 85 80.0
PGR119G1843 Punica granatum HOM05D001017 ORTHO05D001025 4.8e-29 131.7 85 81.2
CSS0020326 Camellia sinensis var. sinensis HOM05D001017 ORTHO05D001025 6.3e-29 131.3 85 78.8
Dinv14481 Davidia involucrata HOM05D001017 ORTHO05D001025 6.3e-29 131.3 86 80.2
Nitab4.5_0011134g0020 Nicotiana tabacum HOM05D001017 ORTHO05D001025 6.3e-29 131.3 85 80.0
Rhsim13G0074400 Rhododendron simsii HOM05D001017 ORTHO05D001025 6.3e-29 131.3 85 78.8
Sed0017882 Sechium edule HOM05D001017 ORTHO05D001025 6.3e-29 131.3 89 76.4
TWI31G0904 Tripterygium wilfordii HOM05D001017 ORTHO05D001025 6.3e-29 131.3 86 81.4
CANSAT54G0069 Cannabis sativa HOM05D001017 ORTHO05D001025 8.2e-29 131.0 86 80.2
MELO3C020579.2 Cucumis melo HOM05D001017 ORTHO05D001025 8.2e-29 131.0 89 75.3
CsaV3_1G035920 Cucumis sativus L. HOM05D001017 ORTHO05D001025 8.2e-29 131.0 89 75.3
Lsat_1_v5_gn_8_72221 Lactuca sativa HOM05D001017 ORTHO05D001025 8.2e-29 131.0 85 80.0
Potri.009G040700 Populus trichocarpa HOM05D001017 ORTHO05D001025 8.2e-29 131.0 85 80.0
Actinidia25127 Actinidia chinensis HOM05D001017 ORTHO05D001025 1.1e-28 130.6 86 80.2
arahy.Tifrunner.gnm1.ann1.9UY90I Arachis hypogaea HOM05D001017 ORTHO05D001025 1.1e-28 130.6 85 78.8
arahy.Tifrunner.gnm1.ann1.G24EMA Arachis hypogaea HOM05D001017 ORTHO05D001025 1.1e-28 130.6 85 78.8
Cpa.g.sc112.86 Carica papaya HOM05D001017 ORTHO05D024852 1.1e-28 130.6 85 78.8
SalBow3G1076 Salvia bowleyana HOM05D001017 ORTHO05D001025 1.4e-28 130.2 85 78.8
SalBow3G2549 Salvia bowleyana HOM05D001017 ORTHO05D001025 1.4e-28 130.2 85 78.8
ClCG03G001020 Citrullus lanatus HOM05D001017 ORTHO05D001025 1.8e-28 129.8 89 75.3
Migut.D02142 Erythranthe guttata HOM05D001017 ORTHO05D001025 1.8e-28 129.8 85 77.6
Peaxi162Scf01058g00157 Petunia axillaris HOM05D001017 ORTHO05D001025 1.8e-28 129.8 85 78.8
SGA_v2.0_scaffold134G34755 Striga asiatica HOM05D001017 ORTHO05D001025 1.8e-28 129.8 86 79.1
THA.LOC104826300 Tarenaya hassleriana HOM05D001017 ORTHO05D001025 1.8e-28 129.8 85 81.2
Cc01_g13690 Coffea canephora HOM05D001017 ORTHO05D001025 2.4e-28 129.4 85 77.6
Haze_24234 Corylus avellana HOM05D001017 ORTHO05D001025 2.4e-28 129.4 80 83.8
Nitab4.5_0000744g0110 Nicotiana tabacum HOM05D001017 ORTHO05D001025 2.4e-28 129.4 86 80.2
Lsat_1_v5_gn_4_65521 Lactuca sativa HOM05D001017 ORTHO05D001025 3.1e-28 129.0 85 77.6
CSS0006142 Camellia sinensis var. sinensis HOM05D001017 ORTHO05D001025 4.1e-28 128.6 84 78.6
Gohir.D13G230600 Gossypium hirsutum HOM05D001017 ORTHO05D001025 4.1e-28 128.6 85 76.5
Gorai.013G261200 Gossypium raimondii HOM05D001017 ORTHO05D001025 4.1e-28 128.6 85 76.5
VMungo0647G0830 Vigna mungo HOM05D001017 ORTHO05D001025 4.1e-28 128.6 86 77.9
MSTRG.21176 Avicennia marina HOM05D001017 ORTHO05D001025 5.3e-28 128.3 86 77.9
Sabra09G0028600 Salix brachista HOM05D001017 ORTHO05D001025 5.3e-28 128.3 86 81.4
GSVIVG01024818001 Vitis vinifera HOM05D001017 ORTHO05D001025 5.3e-28 128.3 86 79.1
Atru.chr3.4052 Acer truncatum HOM05D001017 ORTHO05D001025 6.9e-28 127.9 86 79.1
HanXRQChr05g0135571 Helianthus annuus HOM05D001017 ORTHO05D001025 6.9e-28 127.9 86 79.1
Lalb_Chr04g0247371 Lupinus albus HOM05D001017 ORTHO05D001025 6.9e-28 127.9 85 77.6
TAR636G2951 Trochodendron aralioides HOM05D001017 ORTHO05D001025 6.9e-28 127.9 85 75.3
unitig_747.g22021 Utricularia gibba HOM05D001017 ORTHO05D001025 6.9e-28 127.9 84 77.4
TWI79G1202 Tripterygium wilfordii HOM05D001017 ORTHO05D001025 9.1e-28 127.5 86 80.2
Gohir.A13G225500 Gossypium hirsutum HOM05D001017 ORTHO05D001025 1.2e-27 127.1 85 77.6
Phvul.008G283801 Phaseolus vulgaris HOM05D001017 ORTHO05D001025 2.0e-27 126.3 86 77.9
BcaB02g10262 Brassica carinata HOM05D001017 ORTHO05D001025 2.6e-27 125.9 85 77.6
C04p21280 Brassica napus HOM05D001017 ORTHO05D001025 2.6e-27 125.9 85 77.6
BolC4t23657H Brassica oleracea HOM05D001017 ORTHO05D001025 2.6e-27 125.9 85 77.6
CDE04G3121 Ceratophyllum demersum HOM05D001017 ORTHO05D001025 2.6e-27 125.9 85 74.1
LjContig00081g0002926 Lotus japonicus HOM05D001017 ORTHO05D001025 2.6e-27 125.9 86 76.7
Nn2g13581 Nelumbo nucifera HOM05D001017 ORTHO05D001025 2.6e-27 125.9 84 76.2
Prupe.6G063500 Prunus persica HOM05D001017 ORTHO05D001025 2.6e-27 125.9 85 76.5
Solyc06g076650.4 Solanum lycopersicum HOM05D001017 ORTHO05D001025 2.6e-27 125.9 86 76.7
Sopen06g033040 Solanum pennellii HOM05D001017 ORTHO05D001025 2.6e-27 125.9 86 76.7
PGSC0003DMG400030344 Solanum tuberosum HOM05D001017 ORTHO05D001025 2.6e-27 125.9 86 76.7
TAR633G2410 Trochodendron aralioides HOM05D001017 ORTHO05D001025 2.6e-27 125.9 85 76.5
Aa31LG5G6900 Aethionema arabicum HOM05D001017 ORTHO05D001025 4.5e-27 125.2 85 77.6
AL4G24270 Arabidopsis lyrata HOM05D001017 ORTHO05D001025 4.5e-27 125.2 85 77.6
Carub.0004s1061 Capsella rubella HOM05D001017 ORTHO05D001025 4.5e-27 125.2 85 77.6
ECA238G0143 Erigeron canadensis HOM05D001017 ORTHO05D001025 4.5e-27 125.2 85 76.5
FAN21G0711 Fragaria x ananassa HOM05D001017 ORTHO05D001025 5.9e-27 124.8 85 72.9
MBI05_g34803_MAGBIO Magnolia biondii HOM05D001973 ORTHO05D002095 5.9e-27 124.8 85 74.1
MBI05_g36635_MAGBIO Magnolia biondii HOM05D001973 ORTHO05D002095 5.9e-27 124.8 85 74.1
Glyma.02G304200 Glycine max HOM05D001017 ORTHO05D001025 7.7e-27 124.4 86 77.9
Glyma.14G009600 Glycine max HOM05D001017 ORTHO05D001025 7.7e-27 124.4 86 77.9
Oeu002419.1 Olea europaea HOM05D001017 ORTHO05D001025 7.7e-27 124.4 85 75.3
AT2G29560 Arabidopsis thaliana HOM05D001017 ORTHO05D001025 1.0e-26 124.0 85 76.5
MELO3C026748.2 Cucumis melo HOM05D001017 ORTHO05D024852 1.0e-26 124.0 89 70.8
Medtr5g096970 Medicago truncatula HOM05D001017 ORTHO05D001025 1.0e-26 124.0 86 75.6
FvH4_3g37690 Fragaria vesca HOM05D001017 ORTHO05D001025 1.3e-26 123.6 84 75.0
FAN11G2558 Fragaria x ananassa HOM05D001017 ORTHO05D001025 1.3e-26 123.6 84 75.0
ATR0618G425 Amborella trichopoda HOM05D001017 ORTHO05D001025 1.7e-26 123.2 86 74.4
CARHR122900 Cardamine hirsuta HOM05D001017 ORTHO05D001025 1.7e-26 123.2 85 76.5
A05p15840 Brassica napus HOM05D001017 ORTHO05D001025 2.2e-26 122.9 85 76.5
BraA05t20497Z Brassica rapa HOM05D001017 ORTHO05D001025 2.2e-26 122.9 85 76.5
DCAR_018939 Daucus carota HOM05D001017 ORTHO05D001025 2.2e-26 122.9 86 76.7
Thhalv10016594m.g Eutrema salsugineum HOM05D001017 ORTHO05D001025 2.2e-26 122.9 85 76.5
TPR.G1319 Trifolium pratense HOM05D001017 ORTHO05D001025 2.2e-26 122.9 86 74.4
RcHm_v2.0_Chr5g0067961 Rosa chinensis HOM05D001017 ORTHO05D001025 2.9e-26 122.5 85 75.3
Sp4g12290 Schrenkiella parvula HOM05D001017 ORTHO05D001025 2.9e-26 122.5 85 75.3
HPP92_014287 Vanilla planifolia HOM05D001017 ORTHO05D001025 2.9e-26 122.5 86 74.4
Ca_06442_v3 Cicer arietinum L. HOM05D002022 ORTHO05D002056 3.8e-26 122.1 89 73.0
FAN16G1753 Fragaria x ananassa HOM05D001017 ORTHO05D001025 3.8e-26 122.1 85 72.9
Sc12g0001040 Simmondsia chinensis HOM05D001017 ORTHO05D001025 3.8e-26 122.1 81 79.0
Aqoxy2G02379 Aquilegia oxysepala HOM05D001017 ORTHO05D001025 5.0e-26 121.7 85 72.9
MD03G1078500 Malus domestica HOM05D001017 ORTHO05D001025 5.0e-26 121.7 86 75.6
Oeu017393.1 Olea europaea HOM05D001017 ORTHO05D001025 5.0e-26 121.7 85 72.9
PSO782G1821 Papaver somniferum HOM05D001017 ORTHO05D001025 6.5e-26 121.3 85 72.9
Psat2g005240 Pisum sativum HOM05D001017 ORTHO05D001025 6.5e-26 121.3 86 74.4
FAN25G2676 Fragaria x ananassa HOM05D001017 ORTHO05D001025 1.1e-25 120.6 85 71.8
MD11G1083100 Malus domestica HOM05D001017 ORTHO05D001025 1.4e-25 120.2 95 68.4
EL10Ac7g16101 Beta vulgaris HOM05D001017 ORTHO05D001025 2.5e-25 119.4 81 79.0
Nn2g11340 Nelumbo nucifera HOM05D001017 ORTHO05D001025 3.2e-25 119.0 85 70.6
SHI05893 Sapria himalayana HOM05D001017 ORTHO05D001025 3.2e-25 119.0 86 72.1
PSO063G0291 Papaver somniferum HOM05D001017 ORTHO05D001025 4.2e-25 118.6 85 70.6
Hund18870 Selenicereus undatus HOM05D001017 ORTHO05D001025 4.2e-25 118.6 86 74.4
AUR62001709 Chenopodium quinoa HOM05D001017 ORTHO05D001025 2.7e-24 115.9 86 73.3
AUR62020072 Chenopodium quinoa HOM05D001017 ORTHO05D001025 2.7e-24 115.9 86 73.3
Ah.14g082640 Amaranthus hybridus HOM05D001017 ORTHO05D001025 6.1e-24 114.8 86 70.9
PSO063G0107 Papaver somniferum HOM05D001017 ORTHO05D001025 6.1e-24 114.8 90 65.6
Pp3c13_23550 Physcomitrium patens HOM05D001017 ORTHO05D001025 1.1e-22 110.5 85 64.7
Mapoly0074s0051 Marchantia polymorpha HOM05D001017 ORTHO05D001025 4.4e-22 108.6 86 67.4
SMO361G0020 Selaginella moellendorffii HOM05D001017 ORTHO05D001025 5.7e-22 108.2 85 64.7
SMO361G0731 Selaginella moellendorffii HOM05D001017 ORTHO05D001025 5.7e-22 108.2 85 64.7
AagrBONN_evm.TU.Sc2ySwM_117.2752 Anthoceros agrestis HOM05D001017 ORTHO05D001025 7.4e-22 107.8 85 64.7
CBR_g38423 Chara braunii HOM05D001017 ORTHO05D001025 9.1e-20 100.9 85 63.5
MCO01G025 Micromonas commoda HOM05D001017 ORTHO05D001025 8.5e-18 94.4 85 50.6
Zm00001eb397960 Zea mays HOM05D001017 ORTHO05D001025 8.5e-18 94.4 76 61.8
AagrBONN_evm.TU.Sc2ySwM_117.2753 Anthoceros agrestis HOM05D001017 ORTHO05D001025 2.1e-16 89.7 77 61.0
Zm00001eb011890 Zea mays HOM05D001017 ORTHO05D024852 8.8e-15 84.3 79 55.7
Lalb_Chr04g0247621 Lupinus albus HOM05D001017 ORTHO05D001025 7.4e-14 81.3 49 81.6
Lj2C1074T2 Lonicera japonica HOM05D001017 ORTHO05D024852 1.3e-13 80.5 49 81.6
CAN.G394.97 Capsicum annuum HOM05D001017 ORTHO05D043447 1.7e-13 80.1 49 79.6
PRCOL_00003078 Prasinoderma coloniale HOM05D001017 ORTHO05D001025 2.8e-13 79.3 86 44.2
Cre12.g513200 Chlamydomonas reinhardtii HOM05D001017 ORTHO05D001025 2.4e-12 76.3 85 44.7
CDE07G1742 Ceratophyllum demersum HOM05D001017 ORTHO05D016214 5.2e-07 58.5 86 43.0
Actinidia08563 Actinidia chinensis HOM05D001017 ORTHO05D001025 1.5e-06 57.0 86 44.2


User provided reference genes

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