Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 1.7e-63 245.7 119 100.0
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 1.7e-63 245.7 119 100.0
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 1.5e-46 189.5 140 72.9
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 5.8e-35 151.0 110 74.5
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 8.4e-34 147.1 130 63.1
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 9.3e-33 143.7 135 60.0
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 2.7e-32 142.1 135 58.5
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 6.0e-32 141.0 135 57.8
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 7.9e-32 140.6 135 57.8
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 1.0e-31 140.2 135 58.5
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 1.3e-31 139.8 135 57.8
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 2.3e-31 139.0 135 57.8
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 3.0e-31 138.7 135 57.8
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 3.9e-31 138.3 135 57.0
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 5.1e-31 137.9 131 58.8
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 6.7e-31 137.5 145 55.9
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 6.7e-31 137.5 131 57.3
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 8.7e-31 137.1 135 56.3
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 8.7e-31 137.1 135 57.8
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 1.5e-30 136.3 135 57.0
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 1.9e-30 136.0 135 57.8
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 1.9e-30 136.0 135 54.8
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 2.5e-30 135.6 135 56.3
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 2.5e-30 135.6 135 54.8
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 3.3e-30 135.2 135 56.3
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 4.3e-30 134.8 135 57.0
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 4.3e-30 134.8 135 54.8
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 4.3e-30 134.8 130 58.5
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 5.7e-30 134.4 135 56.3
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 5.7e-30 134.4 135 54.1
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 7.4e-30 134.0 135 56.3
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 7.4e-30 134.0 135 55.6
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 1.3e-29 133.3 121 60.3
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 1.3e-29 133.3 135 55.6
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 1.6e-29 132.9 155 51.0
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 2.1e-29 132.5 135 54.8
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 2.8e-29 132.1 135 54.1
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 3.7e-29 131.7 135 54.8
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 3.7e-29 131.7 134 56.0
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 6.2e-29 131.0 155 50.3
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 6.2e-29 131.0 147 51.0
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 6.2e-29 131.0 144 51.4
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 1.1e-28 130.2 155 49.7
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 1.1e-28 130.2 135 53.3
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 1.4e-28 129.8 131 54.2
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 1.4e-28 129.8 135 52.6
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 1.4e-28 129.8 135 54.1
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 1.8e-28 129.4 135 54.1
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 1.8e-28 129.4 135 52.6
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 1.8e-28 129.4 135 51.9
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 2.4e-28 129.0 131 55.0
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 2.4e-28 129.0 135 54.1
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 2.4e-28 129.0 155 48.4
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 3.1e-28 128.6 131 54.2
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 3.1e-28 128.6 131 54.2
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 3.1e-28 128.6 131 54.2
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 4.1e-28 128.3 155 48.4
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 5.3e-28 127.9 135 51.9
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 6.9e-28 127.5 135 54.1
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 6.9e-28 127.5 131 55.0
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 6.9e-28 127.5 135 53.3
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 9.0e-28 127.1 131 54.2
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 9.0e-28 127.1 131 54.2
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 9.0e-28 127.1 135 54.1
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 1.2e-27 126.7 155 48.4
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 1.2e-27 126.7 135 51.1
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 1.2e-27 126.7 155 47.7
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 1.5e-27 126.3 131 53.4
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 1.5e-27 126.3 131 53.4
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 1.5e-27 126.3 131 53.4
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 2.0e-27 125.9 153 49.0
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 2.0e-27 125.9 131 54.2
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 2.0e-27 125.9 160 48.8
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 2.6e-27 125.6 131 54.2
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 2.6e-27 125.6 131 53.4
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 3.4e-27 125.2 135 52.6
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 5.8e-27 124.4 131 52.7
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 5.8e-27 124.4 131 53.4
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 1.0e-26 123.6 135 51.1
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 1.0e-26 123.6 155 47.1
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 1.3e-26 123.2 154 47.4
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 1.7e-26 122.9 135 49.6
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 2.2e-26 122.5 155 47.7
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 2.9e-26 122.1 150 48.7
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 1.1e-25 120.2 122 56.6
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 1.4e-25 119.8 135 51.1
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 1.9e-25 119.4 131 51.1
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 1.9e-25 119.4 131 49.6
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 5.5e-25 117.9 135 47.4
QL08p004281 Quercus lobata HOM05D005997 ORTHO05D007626 7.2e-25 117.5 94 68.1
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 7.2e-25 117.5 119 56.3
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 2.1e-24 115.9 133 53.4
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 3.5e-24 115.2 119 56.3
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 6.1e-24 114.4 139 51.1
QL11p054366 Quercus lobata HOM05D005997 ORTHO05D338109 1.0e-23 113.6 84 72.6
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 1.3e-23 113.2 133 47.4
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 1.8e-23 112.8 147 44.9
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 1.8e-23 112.8 82 75.6
QL08p004325 Quercus lobata HOM05D005997 ORTHO05D337094 2.3e-23 112.5 81 74.1
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 3.9e-23 111.7 164 43.9
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 3.9e-23 111.7 121 52.1
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 6.7e-23 110.9 121 52.1
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 1.3e-21 106.7 119 52.1
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 6.3e-21 104.4 133 44.4
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 8.2e-21 104.0 124 48.4
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 3.4e-19 98.6 135 47.4
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 1.7e-18 96.3 131 47.3
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 1.9e-17 92.8 56 75.0
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 3.2e-17 92.0 131 45.0
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 2.0e-14 82.8 129 34.9
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 5.7e-14 81.3 129 34.1
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 4.8e-13 78.2 74 54.1
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 1.1e-12 77.0 142 33.8
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 1.4e-12 76.6 125 36.0
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 2.4e-12 75.9 133 37.6
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 4.1e-12 75.1 65 55.4
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 2.0e-11 72.8 56 62.5
Cfa020073 Carpinus fangiana HOM05D005997 ORTHO05D008323 2.0e-11 72.8 48 81.2
CSS0016170 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 7.7e-11 70.9 48 77.1
CSS0047434 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.2e-10 69.3 48 75.0
Atru.chr7.2230 Acer truncatum HOM05D005997 ORTHO05D008323 9.4e-09 63.9 48 72.9
Atru.chr7.2351 Acer truncatum HOM05D005997 ORTHO05D008323 9.4e-09 63.9 48 72.9
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 1.0e-07 60.5 38 71.1
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 3.0e-07 58.9 56 53.6
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 3.0e-07 58.9 56 53.6
QL08p004656 Quercus lobata HOM05D005997 ORTHO05D337365 3.0e-07 58.9 37 73.0
arahy.Tifrunner.gnm1.ann1.U3B0HF Arachis hypogaea HOM05D003842 ORTHO05D026908 2.0e-06 56.2 36 75.0
Lsat_1_v5_gn_6_117540 Lactuca sativa HOM05D005997 ORTHO05D233658 5.7e-06 54.7 63 44.4


User provided reference genes

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