Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p003251 Quercus lobata HOM05D007278 ORTHO05D009280 2.8e-42 174.9 89 100.0
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 1.6e-32 142.5 87 79.3
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 7.7e-32 140.2 87 77.0
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 5.2e-28 127.5 87 74.7
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 6.3e-26 120.6 87 69.0
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 1.8e-25 119.0 87 69.0
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 2.4e-25 118.6 87 66.7
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 3.1e-25 118.2 86 66.3
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 4.1e-25 117.9 86 66.3
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 4.5e-24 114.4 88 62.5
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 7.7e-24 113.6 87 62.1
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 1.0e-23 113.2 87 63.2
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.0e-23 113.2 87 63.2
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 3.8e-23 111.3 87 63.2
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 5.0e-23 110.9 87 62.1
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 6.5e-23 110.5 87 62.1
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 1.1e-22 109.8 87 60.9
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 2.5e-22 108.6 87 63.2
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 2.5e-22 108.6 89 61.8
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 9.4e-22 106.7 89 61.8
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 1.2e-21 106.3 87 62.1
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 2.1e-21 105.5 87 63.2
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 2.7e-21 105.1 87 57.5
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 3.6e-21 104.8 87 59.8
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 4.7e-21 104.4 95 61.1
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 4.7e-21 104.4 87 59.8
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 1.0e-20 103.2 89 59.6
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 1.8e-20 102.4 88 55.7
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 1.8e-20 102.4 91 61.5
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 2.3e-20 102.1 87 56.3
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 3.0e-20 101.7 88 58.0
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 4.0e-20 101.3 88 58.0
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 6.8e-20 100.5 91 57.1
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 1.2e-19 99.8 87 56.3
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 1.5e-19 99.4 87 55.2
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 1.5e-19 99.4 87 55.2
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 1.5e-19 99.4 87 56.3
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 2.0e-19 99.0 86 55.8
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 2.0e-19 99.0 96 56.2
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 2.6e-19 98.6 89 57.3
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 4.4e-19 97.8 91 56.0
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 5.7e-19 97.4 87 55.2
SEGI_34890 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 5.7e-19 97.4 89 52.8
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 9.8e-19 96.7 88 55.7
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 1.3e-18 96.3 90 57.8
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 1.3e-18 96.3 87 54.0
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 3.7e-18 94.7 95 54.7
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 3.7e-18 94.7 95 54.7
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 3.7e-18 94.7 95 54.7
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 8.3e-18 93.6 86 52.3
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 2.4e-17 92.0 86 51.2
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 7.0e-17 90.5 88 55.7
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 9.1e-17 90.1 88 53.4
HPP92_017877 Vanilla planifolia HOM05D007278 ORTHO05D009280 2.0e-16 89.0 89 55.1
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 2.0e-16 89.0 89 55.1
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 2.7e-16 88.6 87 54.0
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 2.7e-16 88.6 90 52.2
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 3.5e-16 88.2 85 52.9
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 3.5e-16 88.2 86 51.2
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 1.0e-15 86.7 87 47.1
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 1.7e-15 85.9 86 50.0
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 2.3e-15 85.5 95 51.6
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 6.6e-15 84.0 87 47.1
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 3.3e-14 81.6 90 48.9
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 5.5e-14 80.9 90 48.9
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 8.9e-12 73.6 95 41.1
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 1.5e-11 72.8 90 46.7
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 9.8e-11 70.1 87 41.4
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 1.3e-10 69.7 90 44.4
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 1.1e-09 66.6 91 38.5
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 9.2e-09 63.5 86 41.9
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 9.2e-09 63.5 86 41.9
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 9.2e-09 63.5 86 41.9


User provided reference genes

Program Settings