Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 4.2e-69 264.6 137 100.0
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 6.9e-48 194.1 142 75.4
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 9.4e-45 183.7 159 66.7
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 1.2e-44 183.3 143 72.7
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 8.8e-43 177.2 140 70.0
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 2.0e-42 176.0 143 69.2
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 2.0e-42 176.0 138 68.8
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 9.7e-42 173.7 140 68.6
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 4.8e-41 171.4 136 69.9
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 1.1e-40 170.2 143 68.5
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 2.4e-40 169.1 138 68.1
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 3.1e-40 168.7 138 66.7
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 1.5e-39 166.4 137 67.2
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 1.5e-39 166.4 138 67.4
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 2.6e-39 165.6 91 89.0
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 4.5e-39 164.9 142 62.7
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 5.9e-39 164.5 146 67.1
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 5.9e-39 164.5 119 71.4
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 7.7e-39 164.1 137 64.2
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 7.7e-39 164.1 137 67.2
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 1.0e-38 163.7 137 64.2
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 1.3e-38 163.3 143 64.3
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.7e-38 162.9 114 76.3
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 1.7e-38 162.9 119 70.6
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 2.2e-38 162.5 137 66.4
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 2.9e-38 162.2 141 65.2
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 6.5e-38 161.0 124 69.4
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 6.5e-38 161.0 121 72.7
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 8.5e-38 160.6 114 72.8
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 8.5e-38 160.6 109 73.4
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 1.1e-37 160.2 135 65.9
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 1.4e-37 159.8 113 76.1
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 1.4e-37 159.8 145 62.8
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.4e-37 159.8 138 67.4
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.9e-37 159.5 141 62.4
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 1.9e-37 159.5 110 75.5
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 2.5e-37 159.1 137 65.0
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 3.2e-37 158.7 137 64.2
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 4.2e-37 158.3 137 64.2
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 4.2e-37 158.3 138 65.2
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 4.2e-37 158.3 145 62.1
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 5.5e-37 157.9 137 62.0
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 5.5e-37 157.9 137 64.2
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 5.5e-37 157.9 126 66.7
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 5.5e-37 157.9 138 64.5
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 7.2e-37 157.5 137 64.2
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 7.2e-37 157.5 138 66.7
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 9.4e-37 157.1 115 72.2
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 1.2e-36 156.8 138 64.5
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 2.1e-36 156.0 90 83.3
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 2.1e-36 156.0 139 63.3
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 2.1e-36 156.0 108 74.1
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 2.7e-36 155.6 144 63.2
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 3.6e-36 155.2 91 82.4
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 3.6e-36 155.2 140 61.4
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 4.7e-36 154.8 138 63.0
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 6.1e-36 154.5 109 74.3
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 7.9e-36 154.1 90 83.3
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 7.9e-36 154.1 90 83.3
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 7.9e-36 154.1 90 83.3
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 7.9e-36 154.1 90 83.3
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 7.9e-36 154.1 129 65.9
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 7.9e-36 154.1 111 73.9
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 1.0e-35 153.7 129 65.1
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 1.0e-35 153.7 114 71.1
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.0e-35 153.7 114 71.1
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.4e-35 153.3 99 77.8
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 1.4e-35 153.3 102 76.5
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 1.4e-35 153.3 142 60.6
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 1.8e-35 152.9 142 62.0
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 2.3e-35 152.5 88 84.1
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 3.0e-35 152.1 137 62.8
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 5.1e-35 151.4 129 65.1
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 5.1e-35 151.4 126 64.3
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 6.7e-35 151.0 128 67.2
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 8.8e-35 150.6 129 63.6
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 1.1e-34 150.2 141 59.6
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 1.5e-34 149.8 138 60.1
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 1.5e-34 149.8 96 77.1
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 1.5e-34 149.8 91 80.2
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 2.0e-34 149.4 137 59.9
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 3.3e-34 148.7 91 80.2
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 4.4e-34 148.3 110 68.2
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 6.3e-33 144.4 83 81.9
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 6.3e-33 144.4 139 56.8
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 8.2e-33 144.1 82 84.1
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 1.8e-32 142.9 141 56.7
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 3.1e-32 142.1 83 80.7
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 4.1e-32 141.7 91 74.7
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 7.0e-32 141.0 82 82.9
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 9.1e-32 140.6 126 62.7
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 9.1e-32 140.6 132 59.8
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 2.0e-31 139.4 93 74.2
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 4.5e-31 138.3 82 80.5
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 2.9e-30 135.6 138 58.7
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 2.9e-30 135.6 84 77.4
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 8.5e-30 134.0 137 56.2
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 1.1e-29 133.7 124 60.5
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 1.9e-29 132.9 88 70.5
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 3.2e-29 132.1 83 77.1
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 3.0e-27 125.6 90 70.0
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 7.4e-26 120.9 88 70.5
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 2.0e-23 112.8 141 54.6
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 2.8e-17 92.4 45 93.3
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 2.9e-14 82.4 45 80.0
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 2.6e-10 69.3 91 46.2
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 3.5e-07 58.9 39 74.4


User provided reference genes

Program Settings