Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 2.2e-90 335.5 158 100.0
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 2.4e-52 209.1 159 64.8
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 2.4e-52 209.1 161 67.7
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 9.4e-49 197.2 163 61.3
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 2.7e-43 179.1 162 57.4
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 4.5e-43 178.3 157 58.6
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 7.7e-43 177.6 163 56.4
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 1.3e-42 176.8 144 60.4
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 1.7e-42 176.4 157 58.6
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 1.5e-41 173.3 155 61.9
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.5e-41 173.3 166 59.6
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 1.9e-41 172.9 131 61.8
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 2.5e-41 172.6 153 59.5
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 3.2e-41 172.2 125 66.4
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 5.5e-41 171.4 157 57.3
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 7.2e-41 171.0 157 58.0
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 7.2e-41 171.0 153 56.9
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 1.2e-40 170.2 152 55.3
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 1.2e-40 170.2 158 58.9
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 2.1e-40 169.5 159 57.9
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.1e-40 169.5 160 57.5
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 2.1e-40 169.5 138 63.0
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 3.6e-40 168.7 159 57.2
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 3.6e-40 168.7 163 57.7
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 3.6e-40 168.7 160 59.4
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.0e-39 167.2 160 55.0
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.0e-39 167.2 159 57.2
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 1.0e-39 167.2 137 60.6
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 1.0e-39 167.2 95 78.9
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 1.8e-39 166.4 155 52.3
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 1.8e-39 166.4 161 57.1
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.8e-39 166.4 88 84.1
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 3.0e-39 165.6 155 57.4
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 3.0e-39 165.6 160 54.4
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 6.8e-39 164.5 160 54.4
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 1.2e-38 163.7 158 52.5
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 1.2e-38 163.7 136 58.8
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 1.5e-38 163.3 158 57.0
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.5e-38 163.3 160 53.8
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 2.6e-38 162.5 155 52.9
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 2.6e-38 162.5 160 55.6
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 2.6e-38 162.5 160 56.9
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 3.4e-38 162.2 162 54.9
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 7.5e-38 161.0 159 55.3
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 7.5e-38 161.0 159 55.3
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 9.8e-38 160.6 139 58.3
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 1.3e-37 160.2 112 65.2
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 1.7e-37 159.8 136 56.6
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 1.7e-37 159.8 159 53.5
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 2.2e-37 159.5 161 52.8
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 2.8e-37 159.1 85 82.4
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 2.8e-37 159.1 95 77.9
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 3.7e-37 158.7 88 81.8
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 4.9e-37 158.3 155 55.5
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 6.3e-37 157.9 133 59.4
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 8.3e-37 157.5 82 84.1
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 8.3e-37 157.5 144 55.6
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 8.3e-37 157.5 162 54.9
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 2.4e-36 156.0 147 53.7
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 4.1e-36 155.2 96 74.0
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 4.1e-36 155.2 88 73.9
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 5.4e-36 154.8 86 77.9
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 5.4e-36 154.8 88 76.1
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 7.0e-36 154.5 83 81.9
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 1.2e-35 153.7 164 52.4
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 1.6e-35 153.3 162 52.5
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 2.7e-35 152.5 76 88.2
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 3.5e-35 152.1 162 54.3
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 7.7e-35 151.0 129 58.1
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 1.3e-34 150.2 72 90.3
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 1.3e-34 150.2 84 76.2
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 6.6e-34 147.9 82 79.3
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 6.6e-34 147.9 72 88.9
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 1.1e-33 147.1 96 69.8
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 3.3e-33 145.6 168 50.0
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 7.3e-33 144.4 146 50.7
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 2.8e-32 142.5 151 55.0
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 8.0e-32 141.0 140 50.0
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 8.0e-32 141.0 150 54.7
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 1.0e-31 140.6 71 84.5
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 1.8e-31 139.8 121 62.0
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 2.3e-31 139.4 83 71.1
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 3.0e-31 139.0 97 62.9
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 2.0e-30 136.3 89 69.7
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 2.6e-30 136.0 65 87.7
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 5.7e-30 134.8 74 83.8
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 1.3e-29 133.7 110 57.3
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 1.3e-29 133.7 147 53.1
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 2.2e-29 132.9 69 87.0
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 5.4e-28 128.3 113 54.9
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 7.0e-28 127.9 65 80.0
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 2.0e-27 126.3 71 81.7
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 3.5e-27 125.6 69 84.1
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 1.0e-26 124.0 70 78.6
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 1.6e-24 116.7 74 73.0
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 3.6e-24 115.5 72 63.9
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 7.5e-22 107.8 65 73.8
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 2.7e-19 99.4 80 57.5
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 3.3e-17 92.4 63 55.6
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 1.1e-15 87.4 116 50.0
Haze_20813 Corylus avellana HOM05D003730 ORTHO05D004458 3.5e-11 72.4 93 47.3
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 8.9e-07 57.8 37 67.6
Sc20g0003470 Simmondsia chinensis HOM05D007483 ORTHO05D009133 4.4e-06 55.5 93 38.7


User provided reference genes

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