Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p048307 Quercus lobata HOM05D003862 ORTHO05D004398 1.3e-82 309.7 158 100.0
CiPaw.09G192600 Carya illinoinensis HOM05D003862 ORTHO05D004398 6.6e-34 147.9 158 55.1
Cfa017379 Carpinus fangiana HOM05D003862 ORTHO05D004398 1.5e-33 146.7 158 54.4
Haze_20791 Corylus avellana HOM05D003862 ORTHO05D004398 1.5e-33 146.7 158 54.4
ClCG10G021140 Citrullus lanatus HOM05D003862 ORTHO05D004398 1.0e-31 140.6 158 51.3
vmacro08654 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.0e-31 140.6 159 55.3
MELO3C009258.2 Cucumis melo HOM05D003862 ORTHO05D004398 2.3e-31 139.4 158 50.6
CsaV3_3G034900 Cucumis sativus L. HOM05D003862 ORTHO05D004398 2.3e-31 139.4 158 50.6
Rhsim05G0192800 Rhododendron simsii HOM05D003862 ORTHO05D004398 3.0e-31 139.0 158 53.2
Lalb_Chr03g0026631 Lupinus albus HOM05D003862 ORTHO05D004398 6.8e-31 137.9 158 50.6
Sed0018689 Sechium edule HOM05D003862 ORTHO05D004398 1.2e-30 137.1 158 50.6
DCAR_030095 Daucus carota HOM05D003862 ORTHO05D004398 1.5e-30 136.7 158 50.0
Lalb_Chr19g0137831 Lupinus albus HOM05D003862 ORTHO05D004398 1.5e-30 136.7 158 50.0
Phvul.011G064100 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 1.5e-30 136.7 158 50.6
Sed0022625 Sechium edule HOM05D003862 ORTHO05D004398 1.5e-30 136.7 158 50.6
Nitab4.5_0000349g0310 Nicotiana tabacum HOM05D003862 ORTHO05D004398 2.0e-30 136.3 158 50.0
Nitab4.5_0001911g0090 Nicotiana tabacum HOM05D003862 ORTHO05D004398 2.0e-30 136.3 158 50.0
CSS0028919 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 2.6e-30 136.0 158 50.6
CSS0038231 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 2.6e-30 136.0 158 50.6
Oeu014415.1 Olea europaea HOM05D003862 ORTHO05D004398 2.6e-30 136.0 158 50.6
Oeu032100.1 Olea europaea HOM05D003862 ORTHO05D004398 2.6e-30 136.0 158 50.6
CAN.G1195.10 Capsicum annuum HOM05D003862 ORTHO05D004398 3.4e-30 135.6 158 49.4
Peaxi162Scf00330g00415 Petunia axillaris HOM05D003862 ORTHO05D004398 3.4e-30 135.6 158 48.7
Solyc10g086510.2 Solanum lycopersicum HOM05D003862 ORTHO05D004398 3.4e-30 135.6 158 49.4
Sopen10g035890 Solanum pennellii HOM05D003862 ORTHO05D004398 3.4e-30 135.6 158 49.4
PGSC0003DMG400019201 Solanum tuberosum HOM05D003862 ORTHO05D004398 3.4e-30 135.6 158 49.4
Prupe.6G077400 Prunus persica HOM05D003862 ORTHO05D004398 4.4e-30 135.2 158 50.6
Cc10_g12100 Coffea canephora HOM05D003862 ORTHO05D004398 5.7e-30 134.8 158 50.0
Migut.D01636 Erythranthe guttata HOM05D003862 ORTHO05D004398 9.8e-30 134.0 158 48.7
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.3e-29 133.7 158 49.4
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.3e-29 133.7 158 49.4
vmacro20157 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.3e-29 133.7 158 49.4
AUR62038108 Chenopodium quinoa HOM05D003862 ORTHO05D004398 1.7e-29 133.3 158 48.1
Dinv17003 Davidia involucrata HOM05D003862 ORTHO05D004398 1.7e-29 133.3 158 50.0
Dinv42952 Davidia involucrata HOM05D003862 ORTHO05D004398 1.7e-29 133.3 158 50.0
Dinv43148 Davidia involucrata HOM05D003862 ORTHO05D004398 1.7e-29 133.3 158 50.0
MD11G1108200 Malus domestica HOM05D003862 ORTHO05D004398 1.7e-29 133.3 158 50.0
RcHm_v2.0_Chr5g0064531 Rosa chinensis HOM05D003862 ORTHO05D004398 1.7e-29 133.3 158 50.0
Ca_19161_v3 Cicer arietinum L. HOM05D003862 ORTHO05D004398 2.2e-29 132.9 158 50.0
Glyma.11G139400 Glycine max HOM05D003862 ORTHO05D004398 2.2e-29 132.9 158 49.4
Prupe.6G255300 Prunus persica HOM05D003862 ORTHO05D004398 2.2e-29 132.9 159 50.9
Migut.D00467 Erythranthe guttata HOM05D003862 ORTHO05D004398 2.9e-29 132.5 158 48.7
Glyma.12G063000 Glycine max HOM05D003862 ORTHO05D004398 2.9e-29 132.5 158 49.4
MD04G1129100 Malus domestica HOM05D003862 ORTHO05D004398 2.9e-29 132.5 159 50.9
Medtr4g063925 Medicago truncatula HOM05D003862 ORTHO05D004398 2.9e-29 132.5 158 49.4
SalBow5G2575 Salvia bowleyana HOM05D003862 ORTHO05D004398 2.9e-29 132.5 158 48.7
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea HOM05D003862 ORTHO05D004398 3.7e-29 132.1 158 48.1
EL10Ac5g11591 Beta vulgaris HOM05D003862 ORTHO05D004398 3.7e-29 132.1 158 47.5
Lj3g0018643 Lotus japonicus HOM05D003862 ORTHO05D004398 4.9e-29 131.7 158 49.4
Ah.02g115390 Amaranthus hybridus HOM05D003862 ORTHO05D004398 6.4e-29 131.3 158 46.8
CDE07G2069 Ceratophyllum demersum HOM05D003862 ORTHO05D004398 6.4e-29 131.3 158 48.7
AUR62025808 Chenopodium quinoa HOM05D003862 ORTHO05D004398 6.4e-29 131.3 158 47.5
TAR636G2804 Trochodendron aralioides HOM05D003862 ORTHO05D004398 6.4e-29 131.3 158 48.7
Cfa011504 Carpinus fangiana HOM05D003862 ORTHO05D004398 8.3e-29 131.0 158 48.7
MBI05_g22042_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 8.3e-29 131.0 158 48.7
HPP92_018126 Vanilla planifolia HOM05D003862 ORTHO05D004398 8.3e-29 131.0 158 48.7
HPP92_018144 Vanilla planifolia HOM05D003862 ORTHO05D004398 8.3e-29 131.0 158 48.7
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea HOM05D003862 ORTHO05D004398 1.4e-28 130.2 158 47.5
unitig_744.g24379 Utricularia gibba HOM05D003862 ORTHO05D004398 1.4e-28 130.2 158 46.8
HanXRQChr05g0136091 Helianthus annuus HOM05D003862 ORTHO05D004398 2.4e-28 129.4 158 48.1
Hund10643 Selenicereus undatus HOM05D003862 ORTHO05D004398 2.4e-28 129.4 158 46.8
GSVIVG01024961001 Vitis vinifera HOM05D003862 ORTHO05D004398 2.4e-28 129.4 158 48.1
unitig_21.g20465 Utricularia gibba HOM05D003164 ORTHO05D003575 3.2e-28 129.0 158 46.8
MD12G1141800 Malus domestica HOM05D003862 ORTHO05D004398 4.1e-28 128.6 159 49.7
PSO063G5647 Papaver somniferum HOM05D003862 ORTHO05D004398 4.1e-28 128.6 158 46.2
PSO339G2698 Papaver somniferum HOM05D003862 ORTHO05D004398 4.1e-28 128.6 158 46.2
PSO384G2795 Papaver somniferum HOM05D003862 ORTHO05D004398 4.1e-28 128.6 158 46.2
GSVIVG01034172001 Vitis vinifera HOM05D003862 ORTHO05D004398 4.1e-28 128.6 158 48.7
Lsat_1_v5_gn_4_177081 Lactuca sativa HOM05D003862 ORTHO05D004398 5.4e-28 128.3 158 47.5
Lsat_1_v5_gn_5_170681 Lactuca sativa HOM05D003862 ORTHO05D004398 5.4e-28 128.3 158 47.5
Os12g0571200 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 5.4e-28 128.3 158 46.8
TAR369G0814 Trochodendron aralioides HOM05D003862 ORTHO05D004398 5.4e-28 128.3 158 48.1
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 7.0e-28 127.9 156 46.8
CiPaw.14G068400 Carya illinoinensis HOM05D003862 ORTHO05D004398 9.2e-28 127.5 158 47.5
Nitab4.5_0006455g0030 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.2e-27 127.1 158 46.8
Gohir.A13G227500 Gossypium hirsutum HOM05D003862 ORTHO05D004398 2.0e-27 126.3 158 47.5
Nitab4.5_0002018g0010 Nicotiana tabacum HOM05D003862 ORTHO05D004398 2.0e-27 126.3 158 46.2
PGR119G1270 Punica granatum HOM05D003862 ORTHO05D004398 2.7e-27 125.9 158 46.8
TWI75G0870 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 2.7e-27 125.9 158 46.8
CARHR155240 Cardamine hirsuta HOM05D003862 ORTHO05D004398 3.5e-27 125.6 158 47.5
TWI36G0288 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 3.5e-27 125.6 158 46.8
FvH4_3g36110 Fragaria vesca HOM05D003862 ORTHO05D004398 4.6e-27 125.2 158 46.8
FAN11G3597 Fragaria x ananassa HOM05D003862 ORTHO05D004398 4.6e-27 125.2 158 46.8
FAN16G1598 Fragaria x ananassa HOM05D003862 ORTHO05D004398 4.6e-27 125.2 158 46.8
FAN21G0907 Fragaria x ananassa HOM05D003862 ORTHO05D004398 4.6e-27 125.2 158 46.8
FAN25G1864 Fragaria x ananassa HOM05D003862 ORTHO05D004398 4.6e-27 125.2 158 46.8
PGR102G0842 Punica granatum HOM05D003862 ORTHO05D004398 4.6e-27 125.2 158 46.2
RcHm_v2.0_Chr3g0466561 Rosa chinensis HOM05D003862 ORTHO05D004398 4.6e-27 125.2 160 47.5
TPR.G14480 Trifolium pratense HOM05D003862 ORTHO05D004398 7.8e-27 124.4 158 49.4
Thhalv10002743m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 1.0e-26 124.0 158 46.2
QL01p031927 Quercus lobata HOM05D003862 ORTHO05D004398 1.3e-26 123.6 219 42.0
Gohir.D13G233100 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.7e-26 123.2 158 46.8
Gorai.013G263900 Gossypium raimondii HOM05D003862 ORTHO05D004398 1.7e-26 123.2 158 46.8
Thhalv10023780m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 2.3e-26 122.9 158 45.6
Sp2g01740 Schrenkiella parvula HOM05D003862 ORTHO05D004398 2.3e-26 122.9 158 45.6
AT3G46560 Arabidopsis thaliana HOM05D003862 ORTHO05D004398 3.0e-26 122.5 158 45.6
Cfa016018 Carpinus fangiana HOM05D000273 ORTHO05D004398 5.0e-26 121.7 158 46.2
CANSAT54G2947 Cannabis sativa HOM05D003862 ORTHO05D004398 6.6e-26 121.3 159 47.2
Gohir.D03G125700 Gossypium hirsutum HOM05D003862 ORTHO05D004398 6.6e-26 121.3 158 46.2
Gorai.003G131900 Gossypium raimondii HOM05D003862 ORTHO05D004398 6.6e-26 121.3 158 46.2
Carub.0005s1283 Capsella rubella HOM05D003862 ORTHO05D004398 8.6e-26 120.9 158 44.9
Duzib150G0578 Durio zibethinus HOM05D003862 ORTHO05D004398 8.6e-26 120.9 158 46.2
TPR.G17728 Trifolium pratense HOM05D003862 ORTHO05D004398 8.6e-26 120.9 158 47.5
TWI31G1113 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 8.6e-26 120.9 158 45.6
Actinidia05313 Actinidia chinensis HOM05D003862 ORTHO05D004398 1.1e-25 120.6 152 47.4
Aa31sc23G440 Aethionema arabicum HOM05D003862 ORTHO05D004398 1.5e-25 120.2 158 44.9
AL5G25420 Arabidopsis lyrata HOM05D003862 ORTHO05D004398 1.5e-25 120.2 158 44.9
Aa31LG4G15560 Aethionema arabicum HOM05D003862 ORTHO05D004398 1.9e-25 119.8 158 45.6
Gohir.A03G042066 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.9e-25 119.8 158 45.6
Nn2g14532 Nelumbo nucifera HOM05D003862 ORTHO05D004398 1.9e-25 119.8 123 57.7
THA.LOC104810779 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 2.5e-25 119.4 158 44.9
Cpa.g.sc81.150 Carica papaya HOM05D003862 ORTHO05D004398 3.3e-25 119.0 158 45.6
COL.COLO4_18508 Corchorus olitorius HOM05D003862 ORTHO05D004398 3.3e-25 119.0 158 44.9
Duzib168G1372 Durio zibethinus HOM05D003862 ORTHO05D004398 3.3e-25 119.0 158 45.6
Duzib170G0179 Durio zibethinus HOM05D003862 ORTHO05D004398 3.3e-25 119.0 158 45.6
Sc20g0004910 Simmondsia chinensis HOM05D003862 ORTHO05D004398 3.3e-25 119.0 63 88.9
THA.LOC104799442 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 3.3e-25 119.0 158 44.9
Dinv37171 Davidia involucrata HOM05D003862 ORTHO05D004398 4.3e-25 118.6 64 89.1
Ciclev10029679m.g Citrus clementina HOM05D003862 ORTHO05D004398 5.6e-25 118.2 158 44.9
Thecc.09G321500 Theobroma cacao HOM05D003862 ORTHO05D004398 5.6e-25 118.2 158 45.6
Carub.0003s2691 Capsella rubella HOM05D003862 ORTHO05D004398 7.3e-25 117.9 158 44.9
ECA248G1530 Erigeron canadensis HOM05D003862 ORTHO05D004398 7.3e-25 117.9 158 43.0
Aqoxy4G02928 Aquilegia oxysepala HOM05D003862 ORTHO05D004398 9.5e-25 117.5 158 44.3
Haze_24096 Corylus avellana HOM05D003862 ORTHO05D004398 2.8e-24 115.9 61 90.2
BcaC04g22454 Brassica carinata HOM05D003862 ORTHO05D004398 4.7e-24 115.2 158 43.0
A09p15900 Brassica napus HOM05D003862 ORTHO05D004398 4.7e-24 115.2 158 43.0
C09p19140 Brassica napus HOM05D003862 ORTHO05D004398 4.7e-24 115.2 158 43.0
BolC9t54821H Brassica oleracea HOM05D003862 ORTHO05D004398 4.7e-24 115.2 158 43.0
BraA09t37226Z Brassica rapa HOM05D003862 ORTHO05D004398 4.7e-24 115.2 158 43.0
Manes.01G173900 Manihot esculenta HOM05D003862 ORTHO05D004398 6.2e-24 114.8 158 43.7
Glyma.03G082300 Glycine max HOM05D003862 ORTHO05D004398 1.0e-23 114.0 158 41.8
HanXRQChr01g0009491 Helianthus annuus HOM05D003862 ORTHO05D004398 1.0e-23 114.0 157 42.7
Potri.012G039100 Populus trichocarpa HOM05D003862 ORTHO05D004398 1.0e-23 114.0 158 43.0
Sabra12G0027600 Salix brachista HOM05D003862 ORTHO05D004398 1.0e-23 114.0 158 43.0
Sc05g0009640 Simmondsia chinensis HOM05D003862 ORTHO05D004398 1.0e-23 114.0 158 41.8
VMungo1127G0240 Vigna mungo HOM05D003862 ORTHO05D004398 1.0e-23 114.0 146 47.3
BcaC02g10413 Brassica carinata HOM05D003862 ORTHO05D004398 1.4e-23 113.6 158 43.0
C04p29160 Brassica napus HOM05D003862 ORTHO05D004398 1.4e-23 113.6 158 43.0
BolC4t24450H Brassica oleracea HOM05D003862 ORTHO05D004398 1.4e-23 113.6 158 43.0
Manes.02G133100 Manihot esculenta HOM05D003862 ORTHO05D004398 1.4e-23 113.6 158 43.0
MD03G1093400 Malus domestica HOM05D003862 ORTHO05D004398 1.8e-23 113.2 146 47.3
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis HOM05D003862 ORTHO05D004398 2.3e-23 112.8 152 43.4
CAN.G326.7 Capsicum annuum HOM05D003862 ORTHO05D004398 2.3e-23 112.8 78 69.2
FAN02G2377 Fragaria x ananassa HOM05D003862 ORTHO05D004398 2.3e-23 112.8 61 86.9
FAN09G4075 Fragaria x ananassa HOM05D003862 ORTHO05D004398 2.3e-23 112.8 61 86.9
BcaB07g31364 Brassica carinata HOM05D003862 ORTHO05D004398 4.0e-23 112.1 158 42.4
Hund04959 Selenicereus undatus HOM05D003862 ORTHO05D004398 5.2e-23 111.7 158 40.5
A03p68180 Brassica napus HOM05D003862 ORTHO05D004398 8.9e-23 110.9 158 42.4
BraA01t02647Z Brassica rapa HOM05D003862 ORTHO05D004398 8.9e-23 110.9 158 42.4
Pp3c24_15930 Physcomitrium patens HOM05D003862 ORTHO05D004398 8.9e-23 110.9 152 43.4
FvH4_6g13690 Fragaria vesca HOM05D003862 ORTHO05D004398 1.2e-22 110.5 61 85.2
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea HOM05D003862 ORTHO05D004398 2.6e-22 109.4 156 42.3
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea HOM05D003862 ORTHO05D004398 2.6e-22 109.4 156 42.3
Mapoly0020s0168 Marchantia polymorpha HOM05D003862 ORTHO05D004398 2.6e-22 109.4 151 41.7
Phvul.L001624 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 3.4e-22 109.0 158 41.1
Actinidia11257 Actinidia chinensis HOM05D003862 ORTHO05D004398 4.4e-22 108.6 61 88.5
ATR0559G041 Amborella trichopoda HOM05D003862 ORTHO05D004398 4.4e-22 108.6 146 44.5
Lj3g0015625 Lotus japonicus HOM05D003862 ORTHO05D004398 7.5e-22 107.8 158 41.1
Pp3c20_6200 Physcomitrium patens HOM05D003862 ORTHO05D004398 1.7e-21 106.7 152 42.1
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea HOM05D003862 ORTHO05D004398 4.9e-21 105.1 156 41.0
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea HOM05D003862 ORTHO05D004398 1.1e-20 104.0 156 40.4
TPR.G5603 Trifolium pratense HOM05D003862 ORTHO05D004398 2.4e-20 102.8 158 37.3
FAN27G3302 Fragaria x ananassa HOM05D003862 ORTHO05D004398 2.0e-19 99.8 61 73.8
SMO367G0781 Selaginella moellendorffii HOM05D003862 ORTHO05D004398 1.7e-18 96.7 61 73.8
Psat7g239120 Pisum sativum HOM05D003862 ORTHO05D004398 2.3e-18 96.3 158 35.4
PGR004G0102 Punica granatum HOM05D003862 ORTHO05D004398 3.0e-18 95.9 154 39.0
Peaxi162Scf00165g00129 Petunia axillaris HOM05D003862 ORTHO05D004398 1.5e-17 93.6 143 40.6
Eucgr.A01265 Eucalyptus grandis HOM05D003862 ORTHO05D004398 3.3e-17 92.4 152 38.8
CBR_g46834 Chara braunii HOM05D003862 ORTHO05D004398 9.5e-17 90.9 61 65.6
SalBow2G1777 Salvia bowleyana HOM05D003862 ORTHO05D004398 3.6e-16 89.0 153 39.9
MCO12G250 Micromonas commoda HOM05D003862 ORTHO05D004398 1.8e-15 86.7 55 70.9
FAN14G4115 Fragaria x ananassa HOM05D003862 ORTHO05D004398 2.3e-15 86.3 46 89.1
MBI14_g20103_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 5.2e-15 85.1 158 38.0
Solyc08g048070.1 Solanum lycopersicum HOM05D003862 ORTHO05D004398 5.2e-15 85.1 54 74.1
unitig_6.g29269 Utricularia gibba HOM05D003862 ORTHO05D004398 2.9e-13 79.3 55 67.3
unitig_747.g21430 Utricularia gibba HOM05D003862 ORTHO05D004398 2.9e-13 79.3 55 67.3
PRCOL_00005138 Prasinoderma coloniale HOM05D003862 ORTHO05D004398 7.8e-11 71.2 55 58.2
Cre01.g033400 Chlamydomonas reinhardtii HOM05D003862 ORTHO05D004398 8.6e-10 67.8 52 57.7
Medtr4g021715 Medicago truncatula HOM05D003862 ORTHO05D004398 1.6e-08 63.5 158 28.5
Os05g0111100 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 2.3e-07 59.7 53 52.8
FAN15G3467 Fragaria x ananassa HOM05D003862 ORTHO05D004398 7.6e-06 54.7 31 80.6


User provided reference genes

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