Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 2.4e-93 345.5 177 100.0
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 6.2e-33 144.8 173 48.6
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 1.1e-32 144.1 168 50.6
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 5.3e-32 141.7 177 48.6
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 4.9e-30 135.2 180 47.8
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 7.9e-28 127.9 170 45.3
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 8.7e-27 124.4 187 46.0
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 8.7e-27 124.4 179 45.3
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 7.4e-26 121.3 179 43.6
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 3.7e-25 119.0 178 47.2
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 4.8e-25 118.6 175 48.0
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 4.0e-24 115.5 160 41.9
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 6.9e-24 114.8 158 47.5
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 3.4e-23 112.5 182 43.4
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.3e-22 110.5 162 47.5
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 1.3e-22 110.5 171 44.4
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 2.9e-22 109.4 179 41.9
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 2.9e-22 109.4 169 46.2
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 3.8e-22 109.0 175 43.4
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 7.1e-21 104.8 164 40.2
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 7.1e-21 104.8 145 46.2
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 2.1e-20 103.2 189 37.6
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 6.0e-20 101.7 152 46.1
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 6.0e-20 101.7 90 62.2
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.0e-19 100.9 176 40.3
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.0e-19 100.9 174 41.4
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.0e-19 100.9 174 41.4
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 1.3e-19 100.5 162 41.4
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 1.3e-19 100.5 162 43.8
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.3e-19 99.8 90 62.2
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 3.0e-19 99.4 172 40.1
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 3.0e-19 99.4 183 37.2
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 5.1e-19 98.6 175 40.0
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 2.1e-17 93.2 159 42.1
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 3.7e-17 92.4 91 59.3
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.7e-17 92.4 76 64.5
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 4.8e-17 92.0 170 36.5
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 4.8e-17 92.0 166 37.3
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 6.2e-17 91.7 175 44.6
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.1e-16 90.9 166 39.8
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 1.4e-16 90.5 143 43.4
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 1.8e-16 90.1 92 53.3
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 5.3e-16 88.6 173 41.0
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 9.0e-16 87.8 159 39.6
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 2.6e-15 86.3 186 36.6
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.4e-15 85.9 173 39.3
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 5.8e-15 85.1 156 41.0
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.3e-14 84.0 161 39.1
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 1.3e-14 84.0 174 37.4
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 2.2e-14 83.2 168 40.5
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 2.2e-14 83.2 168 40.5
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 2.2e-14 83.2 168 40.5
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.9e-14 82.8 175 35.4
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 2.9e-14 82.8 77 57.1
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 3.8e-14 82.4 74 62.2
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.8e-14 82.4 79 57.0
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 6.5e-14 81.6 180 36.7
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 6.5e-14 81.6 101 50.5
Atru.chr8.1967 Acer truncatum HOM05D005967 ORTHO05D005174 1.4e-13 80.5 114 43.9
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.9e-13 80.1 80 56.2
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 1.9e-13 80.1 159 34.6
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 7.2e-13 78.2 95 50.5
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 7.2e-13 78.2 75 54.7
Haze_20783 Corylus avellana HOM05D005967 ORTHO05D005174 9.3e-13 77.8 170 36.5
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 9.3e-13 77.8 103 44.7
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 1.2e-12 77.4 114 43.9
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.2e-12 77.4 83 55.4
VMungo1383G3210 Vigna mungo HOM05D005967 ORTHO05D005174 1.2e-12 77.4 172 39.0
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.6e-12 77.0 173 34.1
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 2.1e-12 76.6 163 38.7
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.7e-12 76.3 120 45.8
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 2.7e-12 76.3 90 50.0
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.5e-12 75.9 172 36.0
CSS0006279 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.0e-11 74.3 169 34.9
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 2.3e-11 73.2 80 50.0
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 3.9e-11 72.4 144 41.7
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 5.1e-11 72.0 163 36.2
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 6.7e-11 71.6 84 54.8
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 6.7e-11 71.6 174 38.5
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 8.7e-11 71.2 72 55.6
Aa31LG1G22380 Aethionema arabicum HOM05D010528 ORTHO05D005174 1.5e-10 70.5 83 49.4
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.9e-10 70.1 98 52.0
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 2.5e-10 69.7 116 41.4
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 3.3e-10 69.3 118 42.4
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 3.3e-10 69.3 148 32.4
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 3.3e-10 69.3 78 52.6
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 4.3e-10 68.9 77 50.6
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 4.3e-10 68.9 84 47.6
Prupe.6G254000 Prunus persica HOM05D005967 ORTHO05D005174 5.7e-10 68.6 149 35.6
Glyma.08G358900 Glycine max HOM05D005967 ORTHO05D005174 7.4e-10 68.2 167 41.9
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 7.4e-10 68.2 157 36.9
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 7.4e-10 68.2 80 50.0
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 1.3e-09 67.4 61 60.7
ClCG04G008210 Citrullus lanatus HOM05D023073 ORTHO05D005174 1.6e-09 67.0 100 43.0
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 1.6e-09 67.0 80 53.8
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 2.2e-09 66.6 119 46.2
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.8e-09 66.2 120 45.8
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.8e-09 66.2 120 45.8
Gohir.A09G156500 Gossypium hirsutum HOM05D036294 ORTHO05D036268 2.8e-09 66.2 149 36.9
Nitab4.5_0004094g0010 Nicotiana tabacum HOM05D005967 ORTHO05D005174 2.8e-09 66.2 112 39.3
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 3.7e-09 65.9 119 46.2
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 4.8e-09 65.5 84 48.8
TPR.G5598 Trifolium pratense HOM05D005967 ORTHO05D005174 4.8e-09 65.5 139 38.8
MSTRG.19086 Avicennia marina HOM05D005967 ORTHO05D005174 6.3e-09 65.1 146 34.2
CAN.G530.10 Capsicum annuum HOM05D016316 ORTHO05D018871 1.4e-08 63.9 188 31.4
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.8e-08 63.5 119 45.4
Phvul.008G100200 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 1.8e-08 63.5 174 35.1
SGA_v2.0_scaffold126G33790 Striga asiatica HOM05D005967 ORTHO05D005174 1.8e-08 63.5 58 50.0
AL6G11650 Arabidopsis lyrata HOM05D010528 ORTHO05D005174 2.4e-08 63.2 79 48.1
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 2.4e-08 63.2 67 49.3
Glyma.18G177800 Glycine max HOM05D005967 ORTHO05D005174 2.4e-08 63.2 178 33.1
vmacro20146 Vaccinium macrocarpon HOM05D005967 ORTHO05D005174 2.4e-08 63.2 41 65.9
Sed0010435 Sechium edule HOM05D023073 ORTHO05D005174 3.1e-08 62.8 79 45.6
TAR688G0002 Trochodendron aralioides HOM05D000645 ORTHO05D005174 3.1e-08 62.8 143 36.4
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 4.1e-08 62.4 158 38.0
Psat3g141040 Pisum sativum HOM05D005967 ORTHO05D005174 4.1e-08 62.4 65 55.4
CARHR210990 Cardamine hirsuta HOM05D010528 ORTHO05D005174 5.3e-08 62.0 79 48.1
TPR.G23268 Trifolium pratense HOM05D005967 ORTHO05D005174 9.0e-08 61.2 86 51.2
THA.LOC104827013 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 1.2e-07 60.8 107 35.5
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 1.2e-07 60.8 66 54.5
Carub.0006s0121 Capsella rubella HOM05D010528 ORTHO05D005174 1.5e-07 60.5 111 38.7
AT5G02420 Arabidopsis thaliana HOM05D010528 ORTHO05D005174 2.6e-07 59.7 108 38.0
PGR004G0898 Punica granatum HOM05D005967 ORTHO05D005174 2.6e-07 59.7 187 32.6
C09p74150 Brassica napus HOM05D010528 ORTHO05D005174 4.5e-07 58.9 75 49.3
BolC9t60147H Brassica oleracea HOM05D010528 ORTHO05D005174 4.5e-07 58.9 75 49.3
SalBow4G0071 Salvia bowleyana HOM05D005967 ORTHO05D005174 4.5e-07 58.9 115 38.3
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 5.9e-07 58.5 110 42.7
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 7.7e-07 58.2 98 41.8
Thhalv10015059m.g Eutrema salsugineum HOM05D010528 ORTHO05D005174 7.7e-07 58.2 79 44.3
Gorai.006G173200 Gossypium raimondii HOM05D036294 ORTHO05D036268 7.7e-07 58.2 62 58.1
CAN.G530.11 Capsicum annuum HOM05D016316 ORTHO05D018871 1.0e-06 57.8 170 29.4
A10p33240 Brassica napus HOM05D010528 ORTHO05D005174 1.3e-06 57.4 75 50.7
BraA10t45352Z Brassica rapa HOM05D010528 ORTHO05D005174 1.3e-06 57.4 75 50.7
Cpa.g.sc81.161 Carica papaya HOM05D005967 ORTHO05D005174 1.3e-06 57.4 170 31.2
MELO3C003127.2 Cucumis melo HOM05D023073 ORTHO05D005174 1.3e-06 57.4 79 49.4
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 1.3e-06 57.4 67 47.8
Gohir.D09G151850 Gossypium hirsutum HOM05D036294 ORTHO05D036268 1.7e-06 57.0 62 58.1
AL8G35800 Arabidopsis lyrata HOM05D012305 ORTHO05D014046 2.2e-06 56.6 55 58.2
Psat7g217000 Pisum sativum HOM05D005967 ORTHO05D005174 2.2e-06 56.6 98 41.8
AT5G59360 Arabidopsis thaliana HOM05D012305 ORTHO05D014046 2.9e-06 56.2 55 60.0
Sed0016652 Sechium edule HOM05D023073 ORTHO05D005174 2.9e-06 56.2 92 44.6
THA.LOC104799445 Tarenaya hassleriana HOM05D012305 ORTHO05D014046 2.9e-06 56.2 193 31.6
CARHR285730 Cardamine hirsuta HOM05D012305 ORTHO05D014046 5.0e-06 55.5 88 45.5
Ca_28209_v3 Cicer arietinum L. HOM05D005967 ORTHO05D005174 5.0e-06 55.5 83 45.8
MD12G1140600 Malus domestica HOM05D005967 ORTHO05D005174 5.0e-06 55.5 166 32.5
Nitab4.5_0000349g0170 Nicotiana tabacum HOM05D016316 ORTHO05D018871 5.0e-06 55.5 161 30.4
RcHm_v2.0_Chr3g0466771 Rosa chinensis HOM05D018126 ORTHO05D020711 5.0e-06 55.5 78 46.2
THA.LOC104823258 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 6.5e-06 55.1 81 44.4
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 8.5e-06 54.7 109 33.9
Medtr4g021870 Medicago truncatula HOM05D005967 ORTHO05D005174 8.5e-06 54.7 138 33.3
Psat0s8791g0040 Pisum sativum HOM05D005967 ORTHO05D005174 8.5e-06 54.7 102 39.2
Rhsim01G0227100 Rhododendron simsii HOM05D005967 ORTHO05D005174 8.5e-06 54.7 129 39.5
Sp7g08770 Schrenkiella parvula HOM05D010528 ORTHO05D005174 8.5e-06 54.7 115 39.1


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