Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 6.5e-135 484.2 264 100.0
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 2.4e-121 439.1 264 90.2
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.1e-121 438.7 264 87.1
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 5.3e-121 438.0 264 87.1
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 6.9e-121 437.6 264 87.5
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 9.0e-121 437.2 264 86.7
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.4e-120 435.3 264 86.0
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 1.3e-119 433.3 264 86.4
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 2.2e-119 432.6 263 86.7
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 6.5e-119 431.0 264 86.4
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 8.5e-119 430.6 277 85.6
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 8.5e-119 430.6 263 88.2
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 1.1e-118 430.3 264 86.4
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 1.4e-118 429.9 264 86.7
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 1.9e-118 429.5 264 86.0
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 3.2e-118 428.7 264 86.7
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 5.5e-118 427.9 264 86.0
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 7.2e-118 427.6 264 86.0
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 9.4e-118 427.2 263 85.9
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 1.2e-117 426.8 264 86.4
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 1.2e-117 426.8 264 86.0
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 2.1e-117 426.0 254 87.4
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 2.1e-117 426.0 264 85.2
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 2.1e-117 426.0 264 86.4
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 2.7e-117 425.6 264 85.2
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 3.6e-117 425.2 264 85.2
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 3.6e-117 425.2 264 85.2
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 3.6e-117 425.2 264 85.6
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 3.6e-117 425.2 264 86.4
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 7.9e-117 424.1 264 84.8
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 7.9e-117 424.1 264 84.8
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 7.9e-117 424.1 260 87.3
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 6.7e-116 421.0 264 84.8
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.1e-115 420.2 264 84.8
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 1.5e-115 419.9 264 82.6
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.5e-115 419.9 264 84.1
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 4.3e-115 418.3 264 83.0
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 4.3e-115 418.3 261 85.1
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 7.4e-115 417.5 264 85.2
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 9.7e-115 417.2 264 83.3
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 2.8e-114 415.6 264 82.6
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 2.4e-113 412.5 263 82.5
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 4.1e-113 411.8 263 81.4
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 4.1e-113 411.8 261 83.5
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 4.1e-113 411.8 264 83.0
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 4.1e-113 411.8 264 81.4
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 5.3e-113 411.4 256 84.4
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 1.2e-112 410.2 260 83.1
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 1.2e-112 410.2 260 83.1
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 1.2e-112 410.2 264 83.0
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 1.5e-112 409.8 260 83.1
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 2.0e-112 409.5 263 83.3
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 2.6e-112 409.1 264 79.9
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 2.6e-112 409.1 263 83.3
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 3.4e-112 408.7 262 81.7
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 3.4e-112 408.7 263 82.9
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 4.5e-112 408.3 262 82.8
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 4.5e-112 408.3 264 81.4
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 4.5e-112 408.3 263 84.0
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.0e-111 407.1 260 82.7
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.0e-111 407.1 260 82.7
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 1.0e-111 407.1 262 81.7
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 1.3e-111 406.8 262 81.7
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 1.7e-111 406.4 263 82.9
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 2.2e-111 406.0 263 81.4
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 2.9e-111 405.6 262 82.4
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 2.9e-111 405.6 264 83.0
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 2.9e-111 405.6 261 81.2
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 2.9e-111 405.6 252 86.5
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 3.8e-111 405.2 262 80.5
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 5.0e-111 404.8 252 86.1
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 8.5e-111 404.1 273 79.9
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 8.5e-111 404.1 262 82.1
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 1.4e-110 403.3 264 79.5
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 3.2e-110 402.1 261 80.8
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 7.2e-110 401.0 262 80.9
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.2e-109 400.2 262 80.5
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 2.1e-109 399.4 261 79.7
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 6.1e-109 397.9 262 80.5
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 7.9e-109 397.5 264 81.8
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 1.0e-108 397.1 262 80.5
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 1.0e-108 397.1 260 80.8
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 1.0e-108 397.1 260 80.8
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.4e-108 396.7 262 80.2
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 1.4e-108 396.7 240 88.3
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 1.4e-108 396.7 252 83.3
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 3.9e-108 395.2 263 80.6
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 5.1e-108 394.8 224 93.3
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 5.1e-108 394.8 262 79.0
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 6.7e-108 394.4 261 78.5
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 6.7e-108 394.4 286 78.3
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.0e-107 392.9 263 78.7
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 2.0e-107 392.9 261 79.7
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 9.7e-107 390.6 256 79.7
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 6.3e-106 387.9 262 78.2
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 2.4e-105 386.0 256 78.5
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 7.0e-105 384.4 251 81.3
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 1.2e-104 383.6 251 81.3
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.2e-104 383.6 260 78.5
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 1.6e-104 383.3 256 80.5
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.3e-103 380.2 285 74.7
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 1.3e-103 380.2 258 78.3
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 8.5e-103 377.5 238 84.5
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 1.5e-102 376.7 224 89.3
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 8.0e-101 370.9 262 73.7
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 5.7e-99 364.8 256 76.6
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 6.3e-98 361.3 262 71.8
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 8.2e-98 360.9 258 74.4
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 7.0e-97 357.8 263 72.2
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 3.2e-94 349.0 262 69.1
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 5.5e-94 348.2 264 74.6
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 4.4e-91 338.6 256 68.4
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 8.3e-90 334.3 256 69.1
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 2.2e-87 326.2 264 69.3
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 2.5e-86 322.8 186 91.9
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.6e-85 320.1 252 69.4
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-66 257.3 253 54.5
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.7e-66 256.9 179 75.4
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 9.2e-65 251.1 161 84.5
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 1.0e-63 247.7 152 86.8
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 3.0e-63 246.1 264 57.6
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.4e-59 232.6 153 82.4
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 2.4e-49 199.9 242 45.5
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 6.0e-48 195.3 264 48.9
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 4.3e-46 189.1 250 40.4
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.5e-40 169.5 234 40.6
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 9.0e-36 154.8 98 79.6
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 9.9e-35 151.4 96 84.4
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 4.2e-33 146.0 240 36.2
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.5e-30 136.7 76 92.1
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 7.4e-30 135.2 118 65.3
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 8.1e-29 131.7 74 90.5
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 6.7e-23 112.1 241 34.0
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 7.4e-22 108.6 99 60.6
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 6.5e-10 68.9 51 70.6


User provided reference genes

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