Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 1.2e-129 466.5 226 100.0
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 1.5e-87 326.6 229 70.3
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 2.5e-79 299.3 229 65.5
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 4.4e-76 288.5 234 61.5
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 9.9e-76 287.3 228 60.5
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 2.7e-73 279.3 201 64.7
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 7.9e-73 277.7 224 59.8
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 7.9e-73 277.7 224 59.8
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 1.0e-72 277.3 226 60.2
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 1.9e-71 273.1 229 58.1
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 7.3e-71 271.2 230 58.7
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 7.3e-71 271.2 210 65.7
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 8.1e-70 267.7 233 59.2
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 1.4e-69 266.9 220 60.9
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 2.6e-68 262.7 240 55.8
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 9.9e-68 260.8 230 58.7
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 1.7e-67 260.0 237 54.9
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 4.9e-67 258.5 229 56.3
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 1.9e-66 256.5 198 66.7
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 7.9e-65 251.1 228 55.7
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 1.5e-63 246.9 234 53.8
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 2.1e-62 243.0 194 59.8
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 1.4e-61 240.4 195 59.0
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 6.9e-61 238.0 229 54.1
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 3.4e-60 235.7 242 50.8
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 7.6e-60 234.6 234 53.0
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 2.2e-59 233.0 216 55.1
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 2.2e-59 233.0 255 47.1
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 3.8e-59 232.3 216 55.6
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 4.9e-59 231.9 216 55.1
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 6.5e-59 231.5 242 50.0
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 6.5e-59 231.5 228 50.0
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 8.4e-59 231.1 238 50.0
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 1.9e-58 229.9 227 52.0
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 3.2e-58 229.2 210 52.4
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 4.2e-58 228.8 242 50.0
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 4.2e-58 228.8 234 50.4
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 7.1e-58 228.0 211 54.5
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 2.7e-57 226.1 196 55.1
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 3.5e-57 225.7 220 50.0
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 6.0e-57 224.9 214 52.3
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 7.9e-57 224.6 226 50.9
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 1.8e-56 223.4 235 46.8
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 1.8e-56 223.4 211 53.1
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 1.8e-56 223.4 195 54.4
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.3e-56 223.0 242 48.8
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 2.3e-56 223.0 226 50.4
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 6.7e-56 221.5 195 56.9
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 6.7e-56 221.5 169 56.8
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.3e-54 217.2 227 50.2
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 2.1e-54 216.5 202 52.5
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 3.1e-53 212.6 199 52.3
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 3.1e-53 212.6 228 49.6
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 5.3e-53 211.8 226 50.0
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 9.0e-53 211.1 226 49.1
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 1.2e-52 210.7 205 51.7
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 1.2e-52 210.7 226 49.1
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 5.8e-52 208.4 195 52.8
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 1.7e-51 206.8 194 51.5
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 3.8e-51 205.7 228 46.1
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 1.4e-50 203.8 230 47.0
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 4.2e-50 202.2 230 47.0
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 7.2e-50 201.4 236 43.6
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 9.3e-50 201.1 236 43.6
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 2.1e-49 199.9 227 46.3
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 2.1e-49 199.9 319 38.6
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 2.7e-49 199.5 236 43.6
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 3.5e-49 199.1 225 49.3
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 1.0e-48 197.6 236 44.1
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 1.0e-48 197.6 237 43.9
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 1.0e-48 197.6 184 52.7
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 1.0e-48 197.6 229 45.4
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 6.7e-48 194.9 236 44.9
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 6.7e-48 194.9 228 45.6
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 2.5e-47 193.0 200 47.0
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 9.7e-47 191.0 210 47.1
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 1.3e-46 190.7 184 51.1
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 8.2e-46 188.0 234 47.0
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 1.8e-45 186.8 194 47.9
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 3.1e-45 186.0 200 46.0
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 5.3e-45 185.3 218 44.5
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 3.4e-44 182.6 230 44.8
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 4.5e-44 182.2 167 52.7
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 2.9e-43 179.5 212 42.5
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 3.8e-43 179.1 183 45.9
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 1.4e-42 177.2 183 45.4
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 1.9e-42 176.8 191 49.2
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 5.5e-42 175.3 229 44.5
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 2.2e-38 163.3 199 43.7
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 2.2e-38 163.3 225 40.4
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 4.7e-33 145.6 117 59.0
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 3.3e-31 139.4 152 48.0
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 3.7e-30 136.0 227 40.5
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 1.4e-29 134.0 186 44.6
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 7.7e-28 128.3 83 65.1
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 3.3e-23 112.8 160 41.9
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 1.3e-22 110.9 121 41.3
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 4.1e-21 105.9 78 60.3
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 3.5e-20 102.8 120 47.5
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 2.5e-18 96.7 87 46.0
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 9.4e-18 94.7 89 51.7
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.0e-16 91.3 62 69.4
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 3.7e-14 82.8 191 27.7
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 5.4e-13 79.0 69 55.1
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 1.3e-11 74.3 210 27.1


User provided reference genes

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