Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p045556 Quercus lobata HOM05D007104 ORTHO05D008851 0.0e+00 1309.7 854 100.0
CiPaw.09G181900 Carya illinoinensis HOM05D007104 ORTHO05D008851 5.3e-263 911.4 862 74.2
Cfa017487 Carpinus fangiana HOM05D007104 ORTHO05D008851 9.7e-257 890.6 865 75.5
Haze_20670 Corylus avellana HOM05D007104 ORTHO05D008851 5.2e-234 815.1 885 67.2
GSVIVG01025541001 Vitis vinifera HOM05D007104 ORTHO05D008851 1.9e-220 770.0 863 63.3
Thecc.05G052200 Theobroma cacao HOM05D007104 ORTHO05D008851 3.6e-211 739.2 862 62.9
Duzib128G0648 Durio zibethinus HOM05D007104 ORTHO05D008851 1.5e-209 733.8 861 62.0
RcHm_v2.0_Chr3g0468421 Rosa chinensis HOM05D007104 ORTHO05D008851 1.7e-205 720.3 863 61.3
Gorai.009G420800 Gossypium raimondii HOM05D007104 ORTHO05D008851 1.2e-201 707.6 866 61.1
MD12G1126500 Malus domestica HOM05D007104 ORTHO05D008851 2.6e-201 706.4 862 60.0
Gohir.A04G077100 Gossypium hirsutum HOM05D007104 ORTHO05D008851 9.8e-201 704.5 865 61.3
Manes.08G001800 Manihot esculenta HOM05D007104 ORTHO05D008851 2.9e-200 703.0 865 59.7
CSS0009185 Camellia sinensis var. sinensis HOM05D007104 ORTHO05D008851 1.1e-199 701.0 785 68.4
Potri.006G132700 Populus trichocarpa HOM05D007104 ORTHO05D008851 3.2e-199 699.5 861 60.4
Dinv35696 Davidia involucrata HOM05D007104 ORTHO05D008851 9.2e-199 698.0 860 60.9
Actinidia05278 Actinidia chinensis HOM05D007104 ORTHO05D008851 6.0e-198 695.3 867 62.4
FAN14G4814 Fragaria x ananassa HOM05D007104 ORTHO05D008851 3.0e-197 693.0 869 58.6
FAN05G0960 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.5e-196 690.6 861 59.0
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 4.7e-195 685.6 790 62.4
TAR633G1446 Trochodendron aralioides HOM05D007104 ORTHO05D008851 4.7e-195 685.6 874 59.4
FvH4_6g15120 Fragaria vesca HOM05D007104 ORTHO05D008851 1.2e-193 681.0 861 59.2
Ciclev10011055m.g Citrus clementina HOM05D007104 ORTHO05D008851 1.5e-193 680.6 795 61.9
Sabra06G0104200 Salix brachista HOM05D007104 ORTHO05D008851 9.2e-191 671.4 864 58.3
TWI18G0316 Tripterygium wilfordii HOM05D007104 ORTHO05D008851 1.2e-190 671.0 856 62.1
PGR004G2266 Punica granatum HOM05D007104 ORTHO05D008851 8.9e-186 654.8 799 61.1
Nn2g12960 Nelumbo nucifera HOM05D007104 ORTHO05D008851 1.3e-184 651.0 869 57.8
Nitab4.5_0006316g0040 Nicotiana tabacum HOM05D007104 ORTHO05D008851 8.4e-184 648.3 866 61.4
Prupe.6G243100 Prunus persica HOM05D007104 ORTHO05D008851 3.2e-183 646.4 860 58.7
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea HOM05D007104 ORTHO05D008851 1.5e-180 637.5 784 52.9
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea HOM05D007104 ORTHO05D008851 3.3e-180 636.3 784 53.1
vmacro08689 Vaccinium macrocarpon HOM05D007104 ORTHO05D008851 9.6e-180 634.8 795 60.3
COL.COLO4_27102 Corchorus olitorius HOM05D007104 ORTHO05D008851 1.6e-179 634.0 689 65.9
Lj1g0014647 Lotus japonicus HOM05D007104 ORTHO05D008851 2.8e-179 633.3 822 58.3
Glyma.19G177700 Glycine max HOM05D007104 ORTHO05D008851 3.6e-179 632.9 784 60.7
Gohir.D04G116200 Gossypium hirsutum HOM05D007104 ORTHO05D008851 3.6e-179 632.9 748 63.6
Sed0027238 Sechium edule HOM05D007104 ORTHO05D008851 2.4e-178 630.2 801 59.2
Sopen09g002070 Solanum pennellii HOM05D007104 ORTHO05D008851 8.9e-178 628.2 870 60.2
Lalb_Chr20g0112911 Lupinus albus HOM05D007104 ORTHO05D008851 4.4e-177 625.9 754 59.7
Solyc09g007200.4 Solanum lycopersicum HOM05D007104 ORTHO05D008851 5.8e-177 625.5 870 60.2
Nitab4.5_0000848g0180 Nicotiana tabacum HOM05D007104 ORTHO05D008851 7.6e-177 625.2 856 55.4
Thhalv10012661m.g Eutrema salsugineum HOM05D007104 ORTHO05D008851 1.9e-175 620.5 866 49.0
C09p73820 Brassica napus HOM05D007104 ORTHO05D008851 2.4e-175 620.2 785 57.1
BolC9t60116H Brassica oleracea HOM05D007104 ORTHO05D008851 2.4e-175 620.2 785 57.1
Sp6g39750 Schrenkiella parvula HOM05D007104 ORTHO05D008851 2.4e-175 620.2 872 53.8
FAN09G1206 Fragaria x ananassa HOM05D007104 ORTHO05D008851 7.1e-175 618.6 861 56.1
Peaxi162Scf00005g05111 Petunia axillaris HOM05D007104 ORTHO05D008851 1.6e-174 617.5 881 56.0
A10p32890 Brassica napus HOM05D007104 ORTHO05D008851 2.1e-174 617.1 785 57.6
BraA10t45326Z Brassica rapa HOM05D007104 ORTHO05D008851 2.1e-174 617.1 785 57.6
CAN.G350.45 Capsicum annuum HOM05D007104 ORTHO05D008851 2.1e-174 617.1 765 63.1
VMungo1383G0332 Vigna mungo HOM05D007104 ORTHO05D008851 6.0e-174 615.5 766 62.1
BcaC06g32013 Brassica carinata HOM05D007104 ORTHO05D008851 7.8e-174 615.1 786 57.0
Carub.0006s0163 Capsella rubella HOM05D007104 ORTHO05D008851 2.3e-173 613.6 874 54.0
Phvul.001G174000 Phaseolus vulgaris HOM05D007104 ORTHO05D008851 3.9e-173 612.8 768 58.3
Medtr7g100550 Medicago truncatula HOM05D007104 ORTHO05D008851 5.1e-173 612.5 794 58.6
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 9.6e-172 608.2 787 51.7
DCAR_017721 Daucus carota HOM05D007104 ORTHO05D008851 1.8e-170 604.0 832 59.4
THA.LOC104826989 Tarenaya hassleriana HOM05D007104 ORTHO05D008851 2.4e-170 603.6 785 58.2
TPR.G36926 Trifolium pratense HOM05D007104 ORTHO05D008851 4.0e-170 602.8 739 58.7
AL6G12100 Arabidopsis lyrata HOM05D007104 ORTHO05D008851 9.0e-170 601.7 873 53.2
AT5G02830 Arabidopsis thaliana HOM05D007104 ORTHO05D008851 3.4e-169 599.7 876 53.4
CsaV3_4G024380 Cucumis sativus L. HOM05D007104 ORTHO05D008851 2.4e-167 593.6 805 57.4
Ca_08818_v3 Cicer arietinum L. HOM05D007104 ORTHO05D008851 3.2e-167 593.2 798 55.8
Psat3g045920 Pisum sativum HOM05D007104 ORTHO05D008851 1.6e-166 590.9 837 55.3
Lj3C977G16 Lonicera japonica HOM05D007104 ORTHO05D008851 2.1e-166 590.5 802 58.4
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 7.9e-166 588.6 740 58.8
Aa31LG1G22070 Aethionema arabicum HOM05D007104 ORTHO05D008851 4.3e-164 582.8 869 47.4
CANSAT80G1630 Cannabis sativa HOM05D007104 ORTHO05D008851 1.3e-163 581.3 861 56.0
MELO3C003069.2 Cucumis melo HOM05D007104 ORTHO05D008851 1.3e-163 581.3 818 49.0
Cc06_g03420 Coffea canephora HOM05D007104 ORTHO05D008851 5.3e-162 575.9 838 55.6
ClCG04G008780 Citrullus lanatus HOM05D007104 ORTHO05D008851 1.7e-160 570.9 805 56.3
Migut.J00404 Erythranthe guttata HOM05D007104 ORTHO05D008851 1.8e-157 560.8 852 52.5
MSTRG.19128 Avicennia marina HOM05D007104 ORTHO05D008851 1.9e-156 557.4 822 54.6
Lsat_1_v5_gn_2_109900 Lactuca sativa HOM05D007104 ORTHO05D008851 3.3e-156 556.6 790 55.6
AUR62040527 Chenopodium quinoa HOM05D007104 ORTHO05D008851 4.3e-156 556.2 786 49.9
ATR0594G196 Amborella trichopoda HOM05D007104 ORTHO05D008851 9.6e-156 555.1 870 50.6
SalBow3G1198 Salvia bowleyana HOM05D007104 ORTHO05D008851 2.4e-154 550.4 861 48.2
Hund12063 Selenicereus undatus HOM05D007104 ORTHO05D008851 1.4e-151 541.2 875 46.9
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 1.9e-151 540.8 846 48.8
HanXRQChr05g0129241 Helianthus annuus HOM05D007104 ORTHO05D008851 5.1e-149 532.7 785 53.8
MBI05_g33311_MAGBIO Magnolia biondii HOM05D007104 ORTHO05D008851 1.5e-148 531.2 835 53.2
PSO339G1446 Papaver somniferum HOM05D007104 ORTHO05D008851 3.8e-144 516.5 872 51.7
PSO384G2670 Papaver somniferum HOM05D007104 ORTHO05D008851 1.4e-143 514.6 818 52.8
SGA_v2.0_scaffold126G33879 Striga asiatica HOM05D007104 ORTHO05D008851 8.7e-141 505.4 808 52.0
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 1.4e-133 481.5 776 39.7
Eucgr.K03203 Eucalyptus grandis HOM05D007104 ORTHO05D008851 9.1e-122 442.2 552 64.7
Glyma.03G177000 Glycine max HOM05D007104 ORTHO05D008851 5.5e-119 433.0 523 66.5
HPP92_003603 Vanilla planifolia HOM05D007104 ORTHO05D008851 5.2e-109 399.8 829 44.8
Aqoxy2G01885 Aquilegia oxysepala HOM05D007104 ORTHO05D008851 2.0e-105 387.9 536 57.5
Os03g0284900 Oryza sativa ssp. japonica HOM05D007104 ORTHO05D008851 5.5e-103 379.8 798 39.3
SEGI_02163 Sequoiadendron giganteum HOM05D007104 ORTHO05D008851 2.8e-99 367.5 802 43.3
Oeu034822.1 Olea europaea HOM05D007104 ORTHO05D008851 7.0e-90 336.3 392 61.0
Atru.chr8.2537 Acer truncatum HOM05D007104 ORTHO05D008851 9.5e-87 325.9 409 66.0
Cpa.g.sc45.26 Carica papaya HOM05D007104 ORTHO05D008851 8.9e-85 319.3 541 57.7
Mapoly0039s0098 Marchantia polymorpha HOM05D007104 ORTHO05D008851 9.5e-71 272.7 754 44.0
Pp3c22_3070 Physcomitrium patens HOM05D007104 ORTHO05D008851 4.4e-68 263.8 789 40.1
Zm00001eb397200 Zea mays HOM05D007104 ORTHO05D008851 9.2e-66 256.1 658 30.4
Atru.chr8.2538 Acer truncatum HOM05D007104 ORTHO05D008851 6.6e-64 250.0 199 63.3
Pp3c21_12360 Physcomitrium patens HOM05D007104 ORTHO05D008851 1.6e-57 228.8 805 37.5
CARHR210500 Cardamine hirsuta HOM05D007104 ORTHO05D008851 2.4e-50 204.9 230 50.4
unitig_16.g32855 Utricularia gibba HOM05D007104 ORTHO05D008851 4.0e-45 187.6 230 49.6
CDE02G1389 Ceratophyllum demersum HOM05D007104 ORTHO05D008851 2.4e-42 178.3 321 52.3
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 7.1e-34 150.2 515 31.3
Oeu027653.1 Olea europaea HOM05D007104 ORTHO05D008851 2.2e-30 138.7 157 47.8
Hma1.2p1_0111F.1_g053720 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 1.7e-22 112.5 120 51.7
Pp3c22_3080 Physcomitrium patens HOM05D007104 ORTHO05D008851 1.1e-21 109.8 166 38.6
Rhsim04G0181000 Rhododendron simsii HOM05D007104 ORTHO05D008851 3.2e-18 98.2 106 72.6
RcHm_v2.0_Chr3g0468351 Rosa chinensis HOM05D007104 ORTHO05D008851 2.1e-17 95.5 74 59.5
CBR_g39241 Chara braunii HOM05D007104 ORTHO05D008851 5.5e-10 70.9 171 52.6


User provided reference genes

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