Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 1.0e-76 290.0 151 100.0
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 1.9e-51 206.1 151 72.8
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 1.3e-50 203.4 151 71.5
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 2.2e-47 192.6 153 71.2
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 3.8e-47 191.8 151 67.5
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 3.8e-47 191.8 151 67.5
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 4.6e-45 184.9 151 66.2
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 1.3e-44 183.3 158 63.9
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 1.3e-44 183.3 154 61.0
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 1.1e-43 180.3 149 62.4
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 2.5e-43 179.1 153 65.4
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 4.3e-43 178.3 153 65.4
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 1.3e-42 176.8 153 65.4
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 2.1e-42 176.0 156 62.8
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 2.8e-42 175.6 146 64.4
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 4.8e-42 174.9 153 63.4
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 8.2e-42 174.1 152 59.9
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 8.2e-42 174.1 151 64.2
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.8e-41 172.9 152 59.9
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 2.6e-40 169.1 151 58.9
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 5.9e-40 167.9 172 53.5
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 7.6e-40 167.5 151 60.9
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 2.2e-39 166.0 144 62.5
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 2.2e-39 166.0 153 63.4
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 2.9e-39 165.6 153 64.1
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 8.5e-39 164.1 151 61.6
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 8.5e-39 164.1 151 59.6
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 1.4e-38 163.3 130 67.7
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 1.9e-38 162.9 91 83.5
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 1.9e-38 162.9 143 64.3
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 2.5e-38 162.5 153 64.1
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 3.2e-38 162.2 152 63.2
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 9.3e-38 160.6 111 69.4
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.2e-37 160.2 89 84.3
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 1.2e-37 160.2 135 61.5
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 1.6e-37 159.8 151 58.3
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 1.6e-37 159.8 156 58.3
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 3.6e-37 158.7 123 68.3
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 4.6e-37 158.3 151 58.3
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 1.0e-36 157.1 151 57.6
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.8e-36 156.4 151 57.0
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 3.0e-36 155.6 115 69.6
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 3.0e-36 155.6 145 62.1
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 3.0e-36 155.6 151 56.3
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 3.9e-36 155.2 155 60.6
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 5.1e-36 154.8 151 58.3
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 8.7e-36 154.1 87 85.1
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 1.5e-35 153.3 152 61.8
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 1.9e-35 152.9 154 56.5
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 1.9e-35 152.9 152 57.9
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 2.5e-35 152.5 91 81.3
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 7.4e-35 151.0 151 60.3
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 7.4e-35 151.0 129 67.4
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 1.3e-34 150.2 88 80.7
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 1.3e-34 150.2 151 55.0
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 2.8e-34 149.1 127 61.4
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 6.3e-34 147.9 91 78.0
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 6.3e-34 147.9 89 77.5
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 1.4e-33 146.7 151 55.6
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 1.8e-33 146.4 151 55.6
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 1.8e-33 146.4 91 76.9
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 1.8e-33 146.4 87 80.5
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 2.4e-33 146.0 151 57.0
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 2.4e-33 146.0 129 57.4
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 5.3e-33 144.8 132 59.8
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 6.9e-33 144.4 151 53.6
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 9.1e-33 144.1 151 55.0
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 1.2e-32 143.7 151 54.3
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 1.2e-32 143.7 135 60.0
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 1.5e-32 143.3 145 50.3
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 1.5e-32 143.3 151 55.6
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 3.4e-32 142.1 137 58.4
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 3.4e-32 142.1 137 58.4
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 3.4e-32 142.1 151 53.0
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 3.4e-32 142.1 90 77.8
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 4.5e-32 141.7 90 75.6
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 7.7e-32 141.0 87 80.5
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 1.3e-31 140.2 87 75.9
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 2.9e-31 139.0 91 72.5
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 3.8e-31 138.7 89 74.2
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 3.8e-31 138.7 89 74.2
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 6.5e-31 137.9 89 74.2
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 1.4e-30 136.7 116 58.6
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 5.5e-30 134.8 90 75.6
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 2.3e-28 129.4 68 85.3
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 2.3e-28 129.4 67 85.1
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 3.9e-28 128.6 78 78.2
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 3.9e-28 128.6 106 62.3
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 3.9e-28 128.6 106 62.3
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 7.4e-27 124.4 71 78.9
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 1.7e-26 123.2 155 52.3
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 6.3e-26 121.3 109 66.1
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 6.3e-26 121.3 155 51.6
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 3.2e-22 109.0 90 66.7
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 5.5e-22 108.2 86 59.3
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 3.6e-21 105.5 87 65.5
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 4.8e-18 95.1 72 66.7
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 1.4e-12 77.0 105 43.8
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 3.0e-12 75.9 87 47.1
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 5.2e-12 75.1 80 45.0
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 1.5e-11 73.6 46 69.6


User provided reference genes

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