Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 5.7e-189 664.1 331 100.0
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 6.0e-130 468.0 331 74.9
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 5.3e-126 454.9 332 75.0
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 1.7e-116 423.3 334 69.2
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 3.9e-113 412.1 334 67.1
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 4.3e-112 408.7 330 66.4
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 9.6e-112 407.5 330 66.4
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 6.2e-111 404.8 330 65.8
arahy.Tifrunner.gnm1.ann1.TG2889 Arachis hypogaea HOM05D006384 ORTHO05D007917 5.3e-110 401.7 337 64.7
FAN09G1862 Fragaria x ananassa HOM05D006384 ORTHO05D007917 5.3e-110 401.7 324 67.3
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 6.9e-110 401.4 324 67.6
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 6.9e-110 401.4 324 67.6
MD12G1115500 Malus domestica HOM05D006384 ORTHO05D007917 2.6e-109 399.4 333 67.0
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 5.8e-109 398.3 324 67.0
Prupe.6G234600 Prunus persica HOM05D006384 ORTHO05D007917 7.6e-109 397.9 328 66.5
arahy.Tifrunner.gnm1.ann1.FRB5VT Arachis hypogaea HOM05D006384 ORTHO05D007917 1.3e-108 397.1 337 63.8
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 1.7e-108 396.7 331 66.2
Cc06_g04070 Coffea canephora HOM05D006384 ORTHO05D007917 4.9e-108 395.2 340 62.1
Potri.006G126200 Populus trichocarpa HOM05D006384 ORTHO05D007917 4.9e-108 395.2 336 64.6
RcHm_v2.0_Chr3g0469981 Rosa chinensis HOM05D006384 ORTHO05D007917 6.5e-108 394.8 326 66.6
THA.LOC104823480 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 8.4e-108 394.4 332 64.5
Rhsim03G0093600 Rhododendron simsii HOM05D006384 ORTHO05D007917 1.1e-107 394.0 342 64.0
Lj1g0002515 Lotus japonicus HOM05D006384 ORTHO05D007917 7.1e-107 391.3 339 64.0
Hma1.2p1_0205F.1_g087265 Hydrangea macrophylla HOM05D006384 ORTHO05D007917 3.5e-106 389.0 326 64.1
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 1.0e-105 387.5 332 64.2
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 3.3e-104 382.5 274 72.3
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 7.4e-104 381.3 336 61.6
TAR369G0955 Trochodendron aralioides HOM05D006384 ORTHO05D007917 7.4e-104 381.3 343 60.6
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 9.6e-104 380.9 333 61.9
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 1.6e-103 380.2 321 64.5
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 2.1e-103 379.8 327 62.4
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 6.3e-103 378.3 322 64.3
Glyma.19G182800 Glycine max HOM05D006384 ORTHO05D007917 1.1e-102 377.5 335 62.7
CAN.G509.15 Capsicum annuum HOM05D006384 ORTHO05D007917 1.8e-102 376.7 331 62.2
AT2G37020 Arabidopsis thaliana HOM05D006384 ORTHO05D007917 9.0e-102 374.4 336 61.9
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 3.4e-101 372.5 333 61.3
Peaxi162Scf00488g00042 Petunia axillaris HOM05D006384 ORTHO05D007917 5.9e-101 371.7 251 74.1
Solyc10g086210.2 Solanum lycopersicum HOM05D006384 ORTHO05D007917 1.3e-100 370.5 334 62.0
Sopen10g035590 Solanum pennellii HOM05D006384 ORTHO05D007917 1.3e-100 370.5 334 62.0
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 1.7e-100 370.2 333 62.8
BcaB01g03801 Brassica carinata HOM05D006384 ORTHO05D007917 1.7e-100 370.2 324 61.4
THA.LOC104806487 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 1.7e-100 370.2 258 72.1
BcaC01g05625 Brassica carinata HOM05D006384 ORTHO05D007917 2.2e-100 369.8 320 61.2
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 2.9e-100 369.4 340 60.3
Dinv37301 Davidia involucrata HOM05D006384 ORTHO05D007917 3.8e-100 369.0 320 65.0
BolC3t14788H Brassica oleracea HOM05D006384 ORTHO05D007917 6.5e-100 368.2 321 61.4
AL4G33330 Arabidopsis lyrata HOM05D006384 ORTHO05D007917 8.4e-100 367.9 331 61.0
Carub.0004s1888 Capsella rubella HOM05D006384 ORTHO05D007917 8.4e-100 367.9 336 61.0
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 8.4e-100 367.9 321 62.9
C03p23970 Brassica napus HOM05D006384 ORTHO05D007917 2.5e-99 366.3 322 60.9
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 3.2e-99 365.9 268 69.8
A03p20380 Brassica napus HOM05D006384 ORTHO05D007917 9.3e-99 364.4 321 61.7
BraA03t11282Z Brassica rapa HOM05D006384 ORTHO05D007917 9.3e-99 364.4 321 61.7
TPR.G9375 Trifolium pratense HOM05D006384 ORTHO05D007917 9.3e-99 364.4 335 60.6
Sp4g19300 Schrenkiella parvula HOM05D006384 ORTHO05D007917 1.2e-98 364.0 337 60.5
Migut.L01690 Erythranthe guttata HOM05D006384 ORTHO05D007917 6.1e-98 361.7 340 59.1
VMungo1383G1856 Vigna mungo HOM05D006384 ORTHO05D007917 6.1e-98 361.7 326 61.3
Phvul.001G178300 Phaseolus vulgaris HOM05D006384 ORTHO05D007917 1.0e-97 360.9 331 62.2
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 1.3e-97 360.5 315 61.0
Eucgr.A01141 Eucalyptus grandis HOM05D006384 ORTHO05D007917 1.8e-97 360.1 329 61.4
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 5.1e-97 358.6 273 66.3
Medtr7g101760 Medicago truncatula HOM05D006384 ORTHO05D007917 2.5e-96 356.3 336 59.5
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 4.3e-96 355.5 325 62.2
CARHR131500 Cardamine hirsuta HOM05D006384 ORTHO05D007917 7.4e-96 354.8 335 58.5
CANSAT80G0575 Cannabis sativa HOM05D006384 ORTHO05D007917 1.6e-95 353.6 321 62.3
Sc20g0005270 Simmondsia chinensis HOM05D006384 ORTHO05D007917 1.6e-95 353.6 266 68.8
SGA_v2.0_scaffold452G51820 Striga asiatica HOM05D006384 ORTHO05D007917 3.7e-95 352.4 314 62.1
Nitab4.5_0002130g0050 Nicotiana tabacum HOM05D006384 ORTHO05D007917 8.2e-95 351.3 307 62.2
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 1.4e-94 350.5 329 58.7
PSO801G0099 Papaver somniferum HOM05D006384 ORTHO05D007917 4.1e-94 349.0 323 59.4
CSS0039092 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 5.3e-94 348.6 225 76.4
Hund20279 Selenicereus undatus HOM05D006384 ORTHO05D007917 1.5e-93 347.1 353 55.8
ATR0680G046 Amborella trichopoda HOM05D006384 ORTHO05D007917 2.6e-93 346.3 245 69.8
PSO339G6114 Papaver somniferum HOM05D006384 ORTHO05D007917 4.5e-93 345.5 328 58.8
Ah.15g092420 Amaranthus hybridus HOM05D006384 ORTHO05D007917 5.9e-93 345.1 324 58.3
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 1.0e-92 344.4 263 66.9
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 1.0e-92 344.4 263 66.9
Nitab4.5_0000754g0290 Nicotiana tabacum HOM05D006384 ORTHO05D007917 1.3e-92 344.0 326 60.7
Lsat_1_v5_gn_1_52961 Lactuca sativa HOM05D006384 ORTHO05D007917 1.7e-92 343.6 315 61.6
Aa31LG5G22260 Aethionema arabicum HOM05D006384 ORTHO05D007917 2.2e-92 343.2 265 67.2
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 2.2e-92 343.2 318 60.1
AUR62040461 Chenopodium quinoa HOM05D006384 ORTHO05D007917 1.9e-91 340.1 251 67.3
Os10g0443200 Oryza sativa ssp. japonica HOM05D006384 ORTHO05D007917 7.2e-91 338.2 262 66.0
DCAR_009302 Daucus carota HOM05D006384 ORTHO05D007917 4.6e-90 335.5 250 66.4
VMungo1383G2663 Vigna mungo HOM05D006384 ORTHO05D007917 7.9e-90 334.7 318 61.0
Actinidia40017 Actinidia chinensis HOM05D006384 ORTHO05D007917 1.0e-89 334.3 267 65.9
Aqoxy2G01819 Aquilegia oxysepala HOM05D006384 ORTHO05D007917 8.8e-89 331.3 259 65.6
HPP92_025998 Vanilla planifolia HOM05D006384 ORTHO05D007917 2.4e-86 323.2 264 62.9
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 9.1e-86 321.2 235 66.0
EL10Ac7g16562 Beta vulgaris HOM05D006384 ORTHO05D007917 2.0e-85 320.1 329 55.9
PGR004G0408 Punica granatum HOM05D006384 ORTHO05D007917 1.7e-76 290.4 268 61.2
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 8.0e-74 281.6 242 57.4
Manes.09G064200 Manihot esculenta HOM05D006384 ORTHO05D007917 8.5e-68 261.5 217 65.4
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 4.2e-67 259.2 237 54.0
FvH4_6g16140 Fragaria vesca HOM05D006384 ORTHO05D007917 7.2e-67 258.5 232 63.4
Cpa.g.c35130 Carica papaya HOM05D006384 ORTHO05D007917 8.0e-66 255.0 197 68.0
AagrBONN_evm.TU.Sc2ySwM_117.2066 Anthoceros agrestis HOM05D006384 ORTHO05D007917 7.0e-62 241.9 244 50.8
Sc20g0001670 Simmondsia chinensis HOM05D006384 ORTHO05D007917 7.0e-62 241.9 239 53.6
TAR623G0498 Trochodendron aralioides HOM05D001475 ORTHO05D001525 1.6e-61 240.7 165 72.1
unitig_0.g684 Utricularia gibba HOM05D006384 ORTHO05D007917 1.5e-59 234.2 192 62.0
CSS0004677 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.8e-57 227.3 152 75.0
CBR_g30715 Chara braunii HOM05D001230 ORTHO05D007917 2.5e-51 206.8 237 44.7
vmacro07280 Vaccinium macrocarpon HOM05D006384 ORTHO05D007917 2.5e-51 206.8 190 60.5
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 4.3e-51 206.1 254 44.1
SMO197G0035 Selaginella moellendorffii HOM05D006384 ORTHO05D007917 3.6e-50 203.0 215 47.0
CSS0019463 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 6.8e-49 198.7 165 65.5
Ciclev10013845m.g Citrus clementina HOM05D006384 ORTHO05D007917 7.5e-48 195.3 136 74.3
AUR62041978 Chenopodium quinoa HOM05D006384 ORTHO05D007917 2.5e-43 180.3 121 69.4
PSO832G0438 Papaver somniferum HOM05D006384 ORTHO05D007917 2.4e-38 163.7 141 62.4
CSS0008908 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.2e-34 151.4 85 84.7
CSS0018803 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.6e-34 151.0 84 85.7
Ciclev10013192m.g Citrus clementina HOM05D006384 ORTHO05D007917 8.3e-31 138.7 118 61.0
Glyma.03G182200 Glycine max HOM05D006384 ORTHO05D007917 1.9e-27 127.5 168 51.8
Zm00001eb222550 Zea mays HOM05D006384 ORTHO05D007917 2.3e-20 104.0 111 53.2
Cfa026119 Carpinus fangiana HOM05D006384 ORTHO05D007917 1.7e-15 87.8 245 27.3
Cpa.g.sc2150.3 Carica papaya HOM05D006384 ORTHO05D007917 2.1e-13 80.9 62 71.0
MELO3C032679.2 Cucumis melo HOM05D006384 ORTHO05D007917 1.4e-09 68.2 57 64.9
DCAR_017395 Daucus carota HOM05D006384 ORTHO05D007917 2.4e-09 67.4 42 71.4
RcHm_v2.0_Chr4g0411411 Rosa chinensis HOM05D006384 ORTHO05D007917 2.4e-09 67.4 48 68.8
CsaV3_7G026110 Cucumis sativus L. HOM05D006384 ORTHO05D007917 3.4e-08 63.5 101 46.5
TAR374G1213 Trochodendron aralioides HOM05D000928 ORTHO05D000023 2.9e-07 60.5 49 55.1
FAN14G2601 Fragaria x ananassa HOM05D006384 ORTHO05D007917 5.4e-06 56.2 75 45.3
FAN14G5547 Fragaria x ananassa HOM05D006384 ORTHO05D007917 5.4e-06 56.2 75 45.3


User provided reference genes

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