Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 1.1e-58 229.6 99 100.0
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 2.0e-52 208.8 99 88.9
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 2.0e-52 208.8 99 89.9
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 3.3e-52 208.0 99 88.9
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 2.8e-51 204.9 99 87.9
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 3.7e-51 204.5 99 87.9
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 3.7e-51 204.5 99 87.9
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 3.7e-51 204.5 99 87.9
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 1.8e-50 202.2 98 88.8
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 2.4e-50 201.8 99 86.9
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 4.1e-50 201.1 99 84.8
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 4.1e-50 201.1 99 84.8
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 7.0e-50 200.3 98 87.8
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 1.6e-49 199.1 99 84.8
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 1.6e-49 199.1 99 85.9
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 2.0e-49 198.7 99 85.9
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 2.7e-49 198.4 98 86.7
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 2.7e-49 198.4 99 84.8
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 2.7e-49 198.4 99 84.8
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 2.7e-49 198.4 99 84.8
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 3.5e-49 198.0 99 82.8
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 3.5e-49 198.0 99 83.8
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 5.9e-49 197.2 99 83.8
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 7.7e-49 196.8 99 82.8
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 1.3e-48 196.1 99 85.9
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 1.7e-48 195.7 99 83.8
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 1.7e-48 195.7 99 82.8
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 2.9e-48 194.9 99 81.8
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 6.5e-48 193.7 99 77.8
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 6.5e-48 193.7 99 82.8
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 8.5e-48 193.4 99 81.8
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 1.5e-47 192.6 99 83.8
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 1.5e-47 192.6 99 82.8
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 2.5e-47 191.8 99 82.8
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 2.5e-47 191.8 99 81.8
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 4.2e-47 191.0 99 81.8
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 1.6e-46 189.1 99 80.8
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 4.7e-46 187.6 99 80.8
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 4.7e-46 187.6 95 84.2
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 4.7e-46 187.6 99 78.8
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 6.1e-46 187.2 99 80.8
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 8.0e-46 186.8 98 79.6
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 8.0e-46 186.8 99 76.8
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 8.0e-46 186.8 99 76.8
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 8.0e-46 186.8 97 77.3
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 1.0e-45 186.4 99 78.8
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 1.0e-45 186.4 99 78.8
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 1.4e-45 186.0 99 80.8
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 1.4e-45 186.0 99 78.8
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 1.4e-45 186.0 99 75.8
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 1.8e-45 185.7 99 82.8
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 1.8e-45 185.7 99 81.8
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 3.0e-45 184.9 99 81.8
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 3.0e-45 184.9 99 81.8
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 3.0e-45 184.9 99 80.8
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 5.2e-45 184.1 99 80.8
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 5.2e-45 184.1 98 80.6
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 6.8e-45 183.7 99 78.8
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 1.2e-44 183.0 99 80.8
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 1.2e-44 183.0 99 80.8
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 1.2e-44 183.0 99 80.8
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 1.2e-44 183.0 99 80.8
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 1.2e-44 183.0 99 80.8
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 1.2e-44 183.0 99 80.8
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 3.4e-44 181.4 98 76.5
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 4.4e-44 181.0 98 75.5
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 7.5e-44 180.3 99 73.7
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 9.8e-44 179.9 99 78.8
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 9.8e-44 179.9 99 79.8
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 1.3e-43 179.5 99 77.8
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 4.8e-43 177.6 99 72.7
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 6.3e-43 177.2 99 78.8
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 6.3e-43 177.2 99 75.8
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 1.1e-42 176.4 99 70.7
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 4.1e-42 174.5 88 85.2
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 2.0e-41 172.2 98 74.5
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 5.9e-41 170.6 99 69.7
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 7.7e-41 170.2 85 84.7
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 7.7e-41 170.2 99 72.7
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 7.7e-41 170.2 99 72.7
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 2.3e-40 168.7 99 68.7
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 3.8e-40 167.9 133 58.6
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 2.1e-38 162.2 99 68.7
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 1.4e-37 159.5 99 66.7
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 1.8e-37 159.1 99 71.7
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 1.8e-37 159.1 99 71.7
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 2.3e-37 158.7 99 65.7
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 1.7e-35 152.5 99 63.6
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 2.2e-35 152.1 87 75.9
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 7.0e-34 147.1 99 63.6
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 5.9e-33 144.1 169 45.0
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 8.6e-32 140.2 110 55.5
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 8.0e-30 133.7 71 78.9
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 1.2e-25 119.8 100 54.0
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 2.1e-22 109.0 58 81.0
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 2.1e-22 109.0 100 50.0
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 3.1e-21 105.1 101 50.5
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 1.1e-18 96.7 99 43.4
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 6.8e-13 77.4 37 86.5
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 2.6e-12 75.5 39 79.5
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 1.7e-11 72.8 31 96.8
Os03g0578200 Oryza sativa ssp. japonica HOM05D007373 ORTHO05D009192 2.3e-08 62.4 76 38.2
Zm00001eb212440 Zea mays HOM05D007373 ORTHO05D009192 6.6e-08 60.8 76 35.5
Zm00001eb061850 Zea mays HOM05D007373 ORTHO05D009192 8.6e-08 60.5 76 36.8


User provided reference genes

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