Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p043269 Quercus lobata HOM05D005435 ORTHO05D007370 8.5e-83 310.5 176 100.0
QL07p043246 Quercus lobata HOM05D005435 ORTHO05D007370 1.8e-69 266.2 169 90.5
QL07p043256 Quercus lobata HOM05D005435 ORTHO05D007370 1.2e-63 246.9 163 85.9
Cfa017616 Carpinus fangiana HOM05D005435 ORTHO05D007370 9.8e-55 217.2 182 69.2
Haze_20541 Corylus avellana HOM05D005435 ORTHO05D007370 1.4e-53 213.4 185 64.9
Atru.chr8.1802 Acer truncatum HOM05D005435 ORTHO05D007370 1.1e-50 203.8 173 66.5
Sed0000088 Sechium edule HOM05D005435 ORTHO05D007370 4.0e-48 195.3 174 62.6
Prupe.6G232000 Prunus persica HOM05D005435 ORTHO05D007370 2.0e-47 193.0 167 64.1
Ciclev10013364m.g Citrus clementina HOM05D005435 ORTHO05D007370 3.4e-47 192.2 175 63.4
RcHm_v2.0_Chr3g0470291 Rosa chinensis HOM05D005435 ORTHO05D007370 7.5e-47 191.0 171 60.8
TWI53G0628 Tripterygium wilfordii HOM05D005435 ORTHO05D007370 7.5e-47 191.0 177 61.0
ClCG04G009400 Citrullus lanatus HOM05D005435 ORTHO05D007370 9.8e-47 190.7 176 61.9
Potri.006G124400 Populus trichocarpa HOM05D005435 ORTHO05D007370 9.8e-47 190.7 182 61.5
Sabra06G0098400 Salix brachista HOM05D005435 ORTHO05D007370 1.3e-46 190.3 182 62.1
TAR633G1880 Trochodendron aralioides HOM05D005435 ORTHO05D007370 1.3e-46 190.3 153 65.4
MELO3C024475.2 Cucumis melo HOM05D005435 ORTHO05D007370 2.9e-46 189.1 176 61.4
CANSAT80G1523 Cannabis sativa HOM05D005435 ORTHO05D007370 1.1e-45 187.2 178 60.1
CsaV3_6G039980 Cucumis sativus L. HOM05D005435 ORTHO05D007370 1.4e-45 186.8 176 60.8
Duzib093G0272 Durio zibethinus HOM05D005435 ORTHO05D007370 1.2e-44 183.7 180 59.4
MD12G1112900 Malus domestica HOM05D005435 ORTHO05D007370 2.0e-44 183.0 169 58.6
PGR142G0097 Punica granatum HOM05D005435 ORTHO05D007370 7.8e-44 181.0 178 58.4
TPR.G32806 Trifolium pratense HOM05D005435 ORTHO05D007370 7.8e-44 181.0 105 81.9
Manes.08G010700 Manihot esculenta HOM05D005435 ORTHO05D007370 1.0e-43 180.6 167 62.3
Dinv03347 Davidia involucrata HOM05D005435 ORTHO05D007370 1.3e-43 180.3 104 81.7
EL10Ac7g16635 Beta vulgaris HOM05D005435 ORTHO05D007370 1.7e-43 179.9 104 82.7
Gohir.D01G130500 Gossypium hirsutum HOM05D005435 ORTHO05D007370 3.0e-43 179.1 178 61.2
Medtr7g101940 Medicago truncatula HOM05D005435 ORTHO05D007370 3.9e-43 178.7 105 80.0
FAN21G2931 Fragaria x ananassa HOM05D005435 ORTHO05D007370 5.0e-43 178.3 137 67.9
Gohir.A01G141700 Gossypium hirsutum HOM05D005435 ORTHO05D007370 6.6e-43 177.9 181 58.6
MD04G1093200 Malus domestica HOM05D005435 ORTHO05D007370 6.6e-43 177.9 169 59.2
Ah.08g211610 Amaranthus hybridus HOM05D005435 ORTHO05D007370 1.5e-42 176.8 104 82.7
Dinv29103 Davidia involucrata HOM05D005435 ORTHO05D007370 1.5e-42 176.8 103 80.6
Gorai.002G161900 Gossypium raimondii HOM05D005435 ORTHO05D007370 1.5e-42 176.8 178 60.7
Migut.J01655 Erythranthe guttata HOM05D005435 ORTHO05D007370 1.9e-42 176.4 105 81.9
FvH4_3g29130 Fragaria vesca HOM05D005435 ORTHO05D007370 1.9e-42 176.4 137 70.1
FAN11G0495 Fragaria x ananassa HOM05D005435 ORTHO05D007370 1.9e-42 176.4 137 67.9
Sc20g0005470 Simmondsia chinensis HOM05D005435 ORTHO05D007370 1.9e-42 176.4 104 80.8
Hund20359 Selenicereus undatus HOM05D005435 ORTHO05D007370 3.3e-42 175.6 103 81.6
Lj3C986G3 Lonicera japonica HOM05D005435 ORTHO05D007370 4.3e-42 175.3 176 57.4
Ca_08861_v3 Cicer arietinum L. HOM05D005435 ORTHO05D007370 7.3e-42 174.5 105 79.0
AUR62014241 Chenopodium quinoa HOM05D005435 ORTHO05D007370 9.5e-42 174.1 104 78.8
DCAR_017682 Daucus carota HOM05D005435 ORTHO05D007370 9.5e-42 174.1 169 59.2
Nitab4.5_0008233g0020 Nicotiana tabacum HOM05D005435 ORTHO05D007370 9.5e-42 174.1 105 79.0
THA.LOC104826914 Tarenaya hassleriana HOM05D005435 ORTHO05D007370 9.5e-42 174.1 159 67.9
ECA238G1020 Erigeron canadensis HOM05D005435 ORTHO05D007370 1.6e-41 173.3 106 78.3
Solyc03g119280.3 Solanum lycopersicum HOM05D005435 ORTHO05D007370 1.6e-41 173.3 105 79.0
arahy.Tifrunner.gnm1.ann1.2UY3HI Arachis hypogaea HOM05D005435 ORTHO05D007370 2.1e-41 172.9 105 80.0
arahy.Tifrunner.gnm1.ann1.3ZC2I8 Arachis hypogaea HOM05D005435 ORTHO05D007370 2.1e-41 172.9 105 80.0
Nitab4.5_0003433g0040 Nicotiana tabacum HOM05D005435 ORTHO05D007370 2.1e-41 172.9 171 55.6
Psat3g042640 Pisum sativum HOM05D005435 ORTHO05D007370 2.1e-41 172.9 174 57.5
Carub.0005s1195 Capsella rubella HOM05D005435 ORTHO05D007370 3.6e-41 172.2 106 77.4
SalBow6G0607 Salvia bowleyana HOM05D005435 ORTHO05D007370 3.6e-41 172.2 105 79.0
Lsat_1_v5_gn_2_123940 Lactuca sativa HOM05D005435 ORTHO05D007370 4.7e-41 171.8 106 77.4
Sopen03g038160 Solanum pennellii HOM05D005435 ORTHO05D007370 4.7e-41 171.8 105 79.0
Actinidia33394 Actinidia chinensis HOM05D005435 ORTHO05D007370 6.2e-41 171.4 167 61.7
Rhsim12G0137200 Rhododendron simsii HOM05D005435 ORTHO05D007370 6.2e-41 171.4 104 78.8
Thhalv10013386m.g Eutrema salsugineum HOM05D005435 ORTHO05D007370 1.1e-40 170.6 105 77.1
Lalb_Chr01g0018691 Lupinus albus HOM05D005435 ORTHO05D007370 1.1e-40 170.6 105 78.1
SGA_v2.0_scaffold105G30289 Striga asiatica HOM05D005435 ORTHO05D007370 1.1e-40 170.6 105 80.0
AL6G12730 Arabidopsis lyrata HOM05D005435 ORTHO05D007370 1.4e-40 170.2 105 78.1
Cc06_g19340 Coffea canephora HOM05D005435 ORTHO05D007370 1.8e-40 169.9 105 75.2
Thecc.05G067100 Theobroma cacao HOM05D005435 ORTHO05D007370 1.8e-40 169.9 180 58.9
AT5G03406 Arabidopsis thaliana HOM05D005435 ORTHO05D007370 2.3e-40 169.5 105 78.1
Glyma.03G183400 Glycine max HOM05D005435 ORTHO05D007370 2.3e-40 169.5 105 77.1
Sp7g12050 Schrenkiella parvula HOM05D005435 ORTHO05D007370 2.3e-40 169.5 106 78.3
Aqoxy2G01759 Aquilegia oxysepala HOM05D005435 ORTHO05D007370 3.1e-40 169.1 108 77.8
Lj1g0010500 Lotus japonicus HOM05D005435 ORTHO05D007370 3.1e-40 169.1 175 56.6
HanXRQChr14g0454441 Helianthus annuus HOM05D005435 ORTHO05D007370 4.0e-40 168.7 104 78.8
PSO063G1591 Papaver somniferum HOM05D005435 ORTHO05D007370 6.8e-40 167.9 152 63.8
VMungo1383G0425 Vigna mungo HOM05D005435 ORTHO05D007370 6.8e-40 167.9 105 76.2
Aa31LG1G21750 Aethionema arabicum HOM05D005435 ORTHO05D007370 8.9e-40 167.5 104 76.9
PSO017G6300 Papaver somniferum HOM05D005435 ORTHO05D007370 8.9e-40 167.5 145 64.8
unitig_899.g15642 Utricularia gibba HOM05D005435 ORTHO05D007370 8.9e-40 167.5 105 77.1
AT3G46100 Arabidopsis thaliana HOM05D005435 ORTHO05D007370 1.5e-39 166.8 106 75.5
MSTRG.10790 Avicennia marina HOM05D005435 ORTHO05D007370 4.4e-39 165.2 149 60.4
AL5G24820 Arabidopsis lyrata HOM05D005435 ORTHO05D007370 7.5e-39 164.5 108 75.9
C03p77020 Brassica napus HOM05D005435 ORTHO05D007370 7.5e-39 164.5 106 74.5
Phvul.001G179200 Phaseolus vulgaris HOM05D005435 ORTHO05D007370 7.5e-39 164.5 105 75.2
A08p24260 Brassica napus HOM05D005435 ORTHO05D007370 9.9e-39 164.1 105 75.2
AUR62038498 Chenopodium quinoa HOM05D005435 ORTHO05D007370 1.7e-38 163.3 97 80.4
BcaNung05574 Brassica carinata HOM05D005435 ORTHO05D007370 2.2e-38 162.9 108 73.1
BraA08t34381Z Brassica rapa HOM05D005435 ORTHO05D007370 2.2e-38 162.9 105 74.3
BolC3t19955H Brassica oleracea HOM05D005435 ORTHO05D007370 3.7e-38 162.2 106 73.6
Peaxi162Scf00454g00414 Petunia axillaris HOM05D005435 ORTHO05D007370 1.9e-37 159.8 99 75.8
Oeu022974.1 Olea europaea HOM05D005435 ORTHO05D007370 4.1e-37 158.7 122 68.9
FAN16G2384 Fragaria x ananassa HOM05D005435 ORTHO05D007370 6.0e-36 154.8 179 52.0
CDE10G0836 Ceratophyllum demersum HOM05D005435 ORTHO05D007370 3.0e-35 152.5 104 68.3
ATR1132G102 Amborella trichopoda HOM05D005435 ORTHO05D007370 1.9e-34 149.8 93 77.4
ECA238G4771 Erigeron canadensis HOM05D005435 ORTHO05D007370 7.3e-34 147.9 94 72.3
SEGI_35251 Sequoiadendron giganteum HOM05D005435 ORTHO05D007370 9.5e-34 147.5 100 70.0
Mapoly0007s0136 Marchantia polymorpha HOM05D005435 ORTHO05D007370 1.2e-33 147.1 103 69.9
AagrBONN_evm.TU.Sc2ySwM_117.1380 Anthoceros agrestis HOM05D005435 ORTHO05D007370 4.7e-33 145.2 96 71.9
vmacro16401 Vaccinium macrocarpon HOM05D005435 ORTHO05D007370 1.1e-32 144.1 149 53.0
CBR_g45330 Chara braunii HOM05D005435 ORTHO05D007370 1.8e-32 143.3 103 66.0
Os02g0754700 Oryza sativa ssp. japonica HOM05D005435 ORTHO05D007370 5.2e-32 141.7 87 74.7
Pp3c1_6360 Physcomitrium patens HOM05D005435 ORTHO05D007370 2.6e-31 139.4 87 74.7
HPP92_007175 Vanilla planifolia HOM05D005435 ORTHO05D007370 5.8e-31 138.3 87 74.7
Pp3c7_24050 Physcomitrium patens HOM05D005435 ORTHO05D007370 1.1e-29 134.0 88 70.5
SMO201G0114 Selaginella moellendorffii HOM05D000113 ORTHO05D001108 2.4e-29 132.9 92 66.3
SMO268G0040 Selaginella moellendorffii HOM05D005435 ORTHO05D007370 2.4e-29 132.9 87 70.1
Eucgr.K02931 Eucalyptus grandis HOM05D005435 ORTHO05D007370 2.1e-28 129.8 71 87.3
CAN.G1425.24 Capsicum annuum HOM05D005435 ORTHO05D007370 1.0e-27 127.5 71 87.3
GSVIVG01025735001 Vitis vinifera HOM05D005435 ORTHO05D007370 2.5e-26 122.9 71 84.5
Manes.09G066100 Manihot esculenta HOM05D005435 ORTHO05D007370 7.3e-26 121.3 157 51.0
BcaC01g00217 Brassica carinata HOM05D005435 ORTHO05D007370 1.2e-25 120.6 106 61.3
CiPaw.09G172100 Carya illinoinensis HOM05D005435 ORTHO05D007370 1.2e-25 120.6 71 84.5
CSS0050261 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-20 104.0 123 48.8
CSS0000486 Camellia sinensis var. sinensis HOM05D005435 ORTHO05D007370 2.1e-20 103.2 106 53.8
MCO02G110 Micromonas commoda HOM05D005435 ORTHO05D007370 2.7e-20 102.8 87 56.3
MCO12G364 Micromonas commoda HOM05D005435 ORTHO05D007370 4.6e-20 102.1 71 67.6
PRCOL_00000347 Prasinoderma coloniale HOM05D005435 ORTHO05D007370 4.6e-20 102.1 102 51.0
PRCOL_00003807 Prasinoderma coloniale HOM05D005435 ORTHO05D007370 9.6e-18 94.4 70 64.3
QL07p043263 Quercus lobata HOM05D005435 ORTHO05D007370 3.1e-16 89.4 58 81.0


User provided reference genes

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