Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p043263 Quercus lobata HOM05D005435 ORTHO05D007370 5.0e-47 190.7 89 100.0
Duzib093G0272 Durio zibethinus HOM05D005435 ORTHO05D007370 4.2e-22 107.8 62 85.5
Prupe.6G232000 Prunus persica HOM05D005435 ORTHO05D007370 2.7e-21 105.1 62 87.1
QL07p043246 Quercus lobata HOM05D005435 ORTHO05D007370 2.7e-21 105.1 62 87.1
Lsat_1_v5_gn_2_123940 Lactuca sativa HOM05D005435 ORTHO05D007370 4.7e-21 104.4 62 85.5
Aa31LG1G21750 Aethionema arabicum HOM05D005435 ORTHO05D007370 6.1e-21 104.0 62 85.5
Ah.08g211610 Amaranthus hybridus HOM05D005435 ORTHO05D007370 6.1e-21 104.0 62 85.5
CiPaw.09G172100 Carya illinoinensis HOM05D005435 ORTHO05D007370 6.1e-21 104.0 62 85.5
Dinv03347 Davidia involucrata HOM05D005435 ORTHO05D007370 6.1e-21 104.0 62 85.5
Ciclev10013364m.g Citrus clementina HOM05D005435 ORTHO05D007370 8.0e-21 103.6 62 85.5
MD04G1093200 Malus domestica HOM05D005435 ORTHO05D007370 8.0e-21 103.6 62 85.5
Phvul.001G179200 Phaseolus vulgaris HOM05D005435 ORTHO05D007370 8.0e-21 103.6 62 80.6
THA.LOC104826914 Tarenaya hassleriana HOM05D005435 ORTHO05D007370 8.0e-21 103.6 62 85.5
CAN.G1425.24 Capsicum annuum HOM05D005435 ORTHO05D007370 1.0e-20 103.2 62 85.5
AUR62014241 Chenopodium quinoa HOM05D005435 ORTHO05D007370 1.0e-20 103.2 62 83.9
AUR62038498 Chenopodium quinoa HOM05D005435 ORTHO05D007370 1.0e-20 103.2 62 83.9
DCAR_017682 Daucus carota HOM05D005435 ORTHO05D007370 1.0e-20 103.2 62 83.9
Eucgr.K02931 Eucalyptus grandis HOM05D005435 ORTHO05D007370 1.0e-20 103.2 62 83.9
RcHm_v2.0_Chr3g0470291 Rosa chinensis HOM05D005435 ORTHO05D007370 1.0e-20 103.2 62 83.9
Solyc03g119280.3 Solanum lycopersicum HOM05D005435 ORTHO05D007370 1.0e-20 103.2 62 85.5
Sopen03g038160 Solanum pennellii HOM05D005435 ORTHO05D007370 1.0e-20 103.2 62 85.5
Cfa017616 Carpinus fangiana HOM05D005435 ORTHO05D007370 1.4e-20 102.8 62 83.9
Haze_20541 Corylus avellana HOM05D005435 ORTHO05D007370 1.4e-20 102.8 62 83.9
Dinv29103 Davidia involucrata HOM05D005435 ORTHO05D007370 1.4e-20 102.8 62 83.9
Nitab4.5_0003433g0040 Nicotiana tabacum HOM05D005435 ORTHO05D007370 1.4e-20 102.8 62 85.5
Nitab4.5_0008233g0020 Nicotiana tabacum HOM05D005435 ORTHO05D007370 1.4e-20 102.8 62 85.5
Hund20359 Selenicereus undatus HOM05D005435 ORTHO05D007370 1.4e-20 102.8 62 83.9
TWI53G0628 Tripterygium wilfordii HOM05D005435 ORTHO05D007370 1.4e-20 102.8 62 83.9
Atru.chr8.1802 Acer truncatum HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
AL6G12730 Arabidopsis lyrata HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
AT5G03406 Arabidopsis thaliana HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
MSTRG.10790 Avicennia marina HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
EL10Ac7g16635 Beta vulgaris HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
Carub.0005s1195 Capsella rubella HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
ECA238G1020 Erigeron canadensis HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
Gohir.A01G141700 Gossypium hirsutum HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
Lj3C986G3 Lonicera japonica HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 82.3
MD12G1112900 Malus domestica HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
Manes.08G010700 Manihot esculenta HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
Potri.006G124400 Populus trichocarpa HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
PGR142G0097 Punica granatum HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 82.3
Sp7g12050 Schrenkiella parvula HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
Sc20g0005470 Simmondsia chinensis HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
Thecc.05G067100 Theobroma cacao HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 83.9
TPR.G32806 Trifolium pratense HOM05D005435 ORTHO05D007370 1.8e-20 102.4 62 82.3
CANSAT80G1523 Cannabis sativa HOM05D005435 ORTHO05D007370 2.3e-20 102.1 62 82.3
Thhalv10013386m.g Eutrema salsugineum HOM05D005435 ORTHO05D007370 2.3e-20 102.1 62 82.3
Migut.J01655 Erythranthe guttata HOM05D005435 ORTHO05D007370 3.0e-20 101.7 62 83.9
HanXRQChr14g0454441 Helianthus annuus HOM05D005435 ORTHO05D007370 3.0e-20 101.7 62 82.3
Oeu022974.1 Olea europaea HOM05D005435 ORTHO05D007370 3.0e-20 101.7 61 85.2
SalBow6G0607 Salvia bowleyana HOM05D005435 ORTHO05D007370 3.0e-20 101.7 62 80.6
SGA_v2.0_scaffold105G30289 Striga asiatica HOM05D005435 ORTHO05D007370 3.0e-20 101.7 62 83.9
AL5G24820 Arabidopsis lyrata HOM05D005435 ORTHO05D007370 4.0e-20 101.3 62 82.3
C03p77020 Brassica napus HOM05D005435 ORTHO05D007370 4.0e-20 101.3 62 82.3
Cc06_g19340 Coffea canephora HOM05D005435 ORTHO05D007370 4.0e-20 101.3 62 82.3
MELO3C024475.2 Cucumis melo HOM05D005435 ORTHO05D007370 4.0e-20 101.3 62 82.3
FvH4_3g29130 Fragaria vesca HOM05D005435 ORTHO05D007370 4.0e-20 101.3 62 83.9
FAN11G0495 Fragaria x ananassa HOM05D005435 ORTHO05D007370 4.0e-20 101.3 62 83.9
FAN21G2931 Fragaria x ananassa HOM05D005435 ORTHO05D007370 4.0e-20 101.3 62 83.9
Sed0000088 Sechium edule HOM05D005435 ORTHO05D007370 4.0e-20 101.3 62 82.3
GSVIVG01025735001 Vitis vinifera HOM05D005435 ORTHO05D007370 4.0e-20 101.3 62 83.9
Actinidia33394 Actinidia chinensis HOM05D005435 ORTHO05D007370 5.2e-20 100.9 62 82.3
Gohir.D01G130500 Gossypium hirsutum HOM05D005435 ORTHO05D007370 5.2e-20 100.9 62 82.3
Gorai.002G161900 Gossypium raimondii HOM05D005435 ORTHO05D007370 5.2e-20 100.9 62 82.3
Lj1g0010500 Lotus japonicus HOM05D005435 ORTHO05D007370 5.2e-20 100.9 62 82.3
Rhsim12G0137200 Rhododendron simsii HOM05D005435 ORTHO05D007370 5.2e-20 100.9 62 82.3
Medtr7g101940 Medicago truncatula HOM05D005435 ORTHO05D007370 6.8e-20 100.5 62 79.0
AT3G46100 Arabidopsis thaliana HOM05D005435 ORTHO05D007370 8.8e-20 100.1 62 80.6
ClCG04G009400 Citrullus lanatus HOM05D005435 ORTHO05D007370 8.8e-20 100.1 62 80.6
CsaV3_6G039980 Cucumis sativus L. HOM05D005435 ORTHO05D007370 8.8e-20 100.1 62 80.6
arahy.Tifrunner.gnm1.ann1.2UY3HI Arachis hypogaea HOM05D005435 ORTHO05D007370 1.5e-19 99.4 62 80.6
arahy.Tifrunner.gnm1.ann1.3ZC2I8 Arachis hypogaea HOM05D005435 ORTHO05D007370 1.5e-19 99.4 62 80.6
Sabra06G0098400 Salix brachista HOM05D005435 ORTHO05D007370 1.5e-19 99.4 62 82.3
BcaNung05574 Brassica carinata HOM05D005435 ORTHO05D007370 2.0e-19 99.0 62 80.6
A08p24260 Brassica napus HOM05D005435 ORTHO05D007370 2.0e-19 99.0 62 80.6
BolC3t19955H Brassica oleracea HOM05D005435 ORTHO05D007370 2.0e-19 99.0 62 80.6
BraA08t34381Z Brassica rapa HOM05D005435 ORTHO05D007370 2.0e-19 99.0 62 80.6
Ca_08861_v3 Cicer arietinum L. HOM05D005435 ORTHO05D007370 2.0e-19 99.0 62 79.0
Psat3g042640 Pisum sativum HOM05D005435 ORTHO05D007370 2.0e-19 99.0 62 79.0
TAR633G1880 Trochodendron aralioides HOM05D005435 ORTHO05D007370 2.6e-19 98.6 62 82.3
Glyma.03G183400 Glycine max HOM05D005435 ORTHO05D007370 3.4e-19 98.2 62 79.0
VMungo1383G0425 Vigna mungo HOM05D005435 ORTHO05D007370 3.4e-19 98.2 62 79.0
PSO017G6300 Papaver somniferum HOM05D005435 ORTHO05D007370 4.4e-19 97.8 62 80.6
PSO063G1591 Papaver somniferum HOM05D005435 ORTHO05D007370 4.4e-19 97.8 62 80.6
vmacro16401 Vaccinium macrocarpon HOM05D005435 ORTHO05D007370 4.4e-19 97.8 61 82.0
unitig_899.g15642 Utricularia gibba HOM05D005435 ORTHO05D007370 5.7e-19 97.4 62 80.6
Aqoxy2G01759 Aquilegia oxysepala HOM05D005435 ORTHO05D007370 7.5e-19 97.1 62 80.6
Lalb_Chr01g0018691 Lupinus albus HOM05D005435 ORTHO05D007370 2.2e-18 95.5 62 77.4
QL07p043256 Quercus lobata HOM05D005435 ORTHO05D007370 8.3e-18 93.6 53 88.7
QL07p043269 Quercus lobata HOM05D005435 ORTHO05D007370 5.4e-17 90.9 58 81.0
ATR1132G102 Amborella trichopoda HOM05D005435 ORTHO05D007370 1.6e-16 89.4 62 75.8
CDE10G0836 Ceratophyllum demersum HOM05D005435 ORTHO05D007370 1.6e-16 89.4 62 74.2
Peaxi162Scf00454g00414 Petunia axillaris HOM05D005435 ORTHO05D007370 2.7e-16 88.6 54 81.5
ECA238G4771 Erigeron canadensis HOM05D005435 ORTHO05D007370 3.5e-16 88.2 62 69.4
Mapoly0007s0136 Marchantia polymorpha HOM05D005435 ORTHO05D007370 3.5e-16 88.2 62 72.6
SEGI_35251 Sequoiadendron giganteum HOM05D005435 ORTHO05D007370 5.9e-16 87.4 62 71.0
BcaC01g00217 Brassica carinata HOM05D005435 ORTHO05D007370 7.7e-16 87.0 53 81.1
CBR_g45330 Chara braunii HOM05D005435 ORTHO05D007370 1.7e-15 85.9 62 71.0
SMO268G0040 Selaginella moellendorffii HOM05D005435 ORTHO05D007370 2.3e-15 85.5 62 71.0
SMO201G0114 Selaginella moellendorffii HOM05D000113 ORTHO05D001108 2.9e-15 85.1 62 69.4
AagrBONN_evm.TU.Sc2ySwM_117.1380 Anthoceros agrestis HOM05D005435 ORTHO05D007370 3.8e-15 84.7 62 69.4
Pp3c1_6360 Physcomitrium patens HOM05D005435 ORTHO05D007370 1.1e-14 83.2 62 71.0
Pp3c7_24050 Physcomitrium patens HOM05D005435 ORTHO05D007370 1.1e-14 83.2 62 71.0
FAN16G2384 Fragaria x ananassa HOM05D005435 ORTHO05D007370 5.5e-14 80.9 104 50.0
CSS0000486 Camellia sinensis var. sinensis HOM05D005435 ORTHO05D007370 7.2e-14 80.5 41 90.2
Os02g0754700 Oryza sativa ssp. japonica HOM05D005435 ORTHO05D007370 1.2e-13 79.7 62 66.1
HPP92_007175 Vanilla planifolia HOM05D005435 ORTHO05D007370 3.6e-13 78.2 62 64.5
MCO12G364 Micromonas commoda HOM05D005435 ORTHO05D007370 3.0e-12 75.1 62 62.9
PRCOL_00003807 Prasinoderma coloniale HOM05D005435 ORTHO05D007370 1.5e-11 72.8 62 59.7
Cpa.g.sc738.3 Carica papaya HOM05D005435 ORTHO05D007370 1.7e-07 59.3 29 93.1
MCO02G110 Micromonas commoda HOM05D005435 ORTHO05D007370 2.9e-07 58.5 61 50.8
PRCOL_00000347 Prasinoderma coloniale HOM05D005435 ORTHO05D007370 1.9e-06 55.8 65 47.7


User provided reference genes

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