Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p043256 Quercus lobata HOM05D005435 ORTHO05D007370 6.5e-77 290.8 163 100.0
QL07p043246 Quercus lobata HOM05D005435 ORTHO05D007370 1.2e-70 270.0 163 94.5
QL07p043269 Quercus lobata HOM05D005435 ORTHO05D007370 8.2e-64 247.3 163 85.9
Cfa017616 Carpinus fangiana HOM05D005435 ORTHO05D007370 1.3e-53 213.4 176 69.9
Haze_20541 Corylus avellana HOM05D005435 ORTHO05D007370 2.7e-51 205.7 176 64.8
Atru.chr8.1802 Acer truncatum HOM05D005435 ORTHO05D007370 1.3e-48 196.8 167 64.7
Potri.006G124400 Populus trichocarpa HOM05D005435 ORTHO05D007370 8.2e-48 194.1 176 61.9
Sabra06G0098400 Salix brachista HOM05D005435 ORTHO05D007370 8.2e-48 194.1 176 62.5
Ciclev10013364m.g Citrus clementina HOM05D005435 ORTHO05D007370 2.4e-47 192.6 167 64.1
RcHm_v2.0_Chr3g0470291 Rosa chinensis HOM05D005435 ORTHO05D007370 5.3e-47 191.4 154 66.2
Prupe.6G232000 Prunus persica HOM05D005435 ORTHO05D007370 9.1e-47 190.7 138 71.7
TWI53G0628 Tripterygium wilfordii HOM05D005435 ORTHO05D007370 2.0e-46 189.5 171 60.2
Sed0000088 Sechium edule HOM05D005435 ORTHO05D007370 1.5e-44 183.3 158 62.0
ClCG04G009400 Citrullus lanatus HOM05D005435 ORTHO05D007370 4.2e-44 181.8 170 60.0
MD12G1112900 Malus domestica HOM05D005435 ORTHO05D007370 9.4e-44 180.6 151 62.9
MELO3C024475.2 Cucumis melo HOM05D005435 ORTHO05D007370 1.2e-43 180.3 170 59.4
CANSAT80G1523 Cannabis sativa HOM05D005435 ORTHO05D007370 1.6e-43 179.9 168 60.1
Duzib093G0272 Durio zibethinus HOM05D005435 ORTHO05D007370 4.7e-43 178.3 174 58.6
CsaV3_6G039980 Cucumis sativus L. HOM05D005435 ORTHO05D007370 6.1e-43 177.9 170 58.8
TAR633G1880 Trochodendron aralioides HOM05D005435 ORTHO05D007370 6.1e-43 177.9 147 63.3
MD04G1093200 Malus domestica HOM05D005435 ORTHO05D007370 1.0e-42 177.2 138 65.9
FAN21G2931 Fragaria x ananassa HOM05D005435 ORTHO05D007370 1.8e-42 176.4 144 65.3
PGR142G0097 Punica granatum HOM05D005435 ORTHO05D007370 3.0e-42 175.6 153 61.4
Gohir.A01G141700 Gossypium hirsutum HOM05D005435 ORTHO05D007370 4.0e-42 175.3 157 64.3
FvH4_3g29130 Fragaria vesca HOM05D005435 ORTHO05D007370 6.8e-42 174.5 144 67.4
FAN11G0495 Fragaria x ananassa HOM05D005435 ORTHO05D007370 6.8e-42 174.5 144 65.3
Manes.08G010700 Manihot esculenta HOM05D005435 ORTHO05D007370 6.8e-42 174.5 172 59.3
Gohir.D01G130500 Gossypium hirsutum HOM05D005435 ORTHO05D007370 8.8e-42 174.1 157 63.7
Gorai.002G161900 Gossypium raimondii HOM05D005435 ORTHO05D007370 8.8e-42 174.1 157 64.3
EL10Ac7g16635 Beta vulgaris HOM05D005435 ORTHO05D007370 1.2e-41 173.7 128 68.0
Thecc.05G067100 Theobroma cacao HOM05D005435 ORTHO05D007370 1.2e-41 173.7 174 62.1
TPR.G32806 Trifolium pratense HOM05D005435 ORTHO05D007370 2.0e-41 172.9 95 84.2
Dinv03347 Davidia involucrata HOM05D005435 ORTHO05D007370 3.4e-41 172.2 93 84.9
Hund20359 Selenicereus undatus HOM05D005435 ORTHO05D007370 4.4e-41 171.8 155 60.0
Dinv29103 Davidia involucrata HOM05D005435 ORTHO05D007370 7.5e-41 171.0 93 83.9
Medtr7g101940 Medicago truncatula HOM05D005435 ORTHO05D007370 9.7e-41 170.6 95 82.1
Ah.08g211610 Amaranthus hybridus HOM05D005435 ORTHO05D007370 2.2e-40 169.5 90 88.9
PSO063G1591 Papaver somniferum HOM05D005435 ORTHO05D007370 2.8e-40 169.1 146 68.5
AUR62014241 Chenopodium quinoa HOM05D005435 ORTHO05D007370 4.8e-40 168.3 126 67.5
Migut.J01655 Erythranthe guttata HOM05D005435 ORTHO05D007370 4.8e-40 168.3 95 84.2
Psat3g042640 Pisum sativum HOM05D005435 ORTHO05D007370 6.3e-40 167.9 95 81.1
Solyc03g119280.3 Solanum lycopersicum HOM05D005435 ORTHO05D007370 6.3e-40 167.9 167 57.5
DCAR_017682 Daucus carota HOM05D005435 ORTHO05D007370 1.1e-39 167.2 90 85.6
Lj3C986G3 Lonicera japonica HOM05D005435 ORTHO05D007370 1.1e-39 167.2 170 56.5
Sc20g0005470 Simmondsia chinensis HOM05D005435 ORTHO05D007370 1.1e-39 167.2 93 82.8
THA.LOC104826914 Tarenaya hassleriana HOM05D005435 ORTHO05D007370 1.1e-39 167.2 153 68.0
Ca_08861_v3 Cicer arietinum L. HOM05D005435 ORTHO05D007370 1.8e-39 166.4 95 81.1
Nitab4.5_0008233g0020 Nicotiana tabacum HOM05D005435 ORTHO05D007370 1.8e-39 166.4 92 83.7
SalBow6G0607 Salvia bowleyana HOM05D005435 ORTHO05D007370 1.8e-39 166.4 95 82.1
Sopen03g038160 Solanum pennellii HOM05D005435 ORTHO05D007370 1.8e-39 166.4 94 83.0
Nitab4.5_0003433g0040 Nicotiana tabacum HOM05D005435 ORTHO05D007370 2.4e-39 166.0 165 55.2
PSO017G6300 Papaver somniferum HOM05D005435 ORTHO05D007370 3.1e-39 165.6 139 67.6
Carub.0005s1195 Capsella rubella HOM05D005435 ORTHO05D007370 4.1e-39 165.2 94 81.9
AL6G12730 Arabidopsis lyrata HOM05D005435 ORTHO05D007370 5.3e-39 164.9 93 80.6
Actinidia33394 Actinidia chinensis HOM05D005435 ORTHO05D007370 7.0e-39 164.5 91 85.7
AT5G03406 Arabidopsis thaliana HOM05D005435 ORTHO05D007370 9.1e-39 164.1 93 80.6
arahy.Tifrunner.gnm1.ann1.3ZC2I8 Arachis hypogaea HOM05D005435 ORTHO05D007370 9.1e-39 164.1 95 81.1
ECA238G1020 Erigeron canadensis HOM05D005435 ORTHO05D007370 9.1e-39 164.1 96 79.2
Sp7g12050 Schrenkiella parvula HOM05D005435 ORTHO05D007370 9.1e-39 164.1 92 82.6
Aqoxy2G01759 Aquilegia oxysepala HOM05D005435 ORTHO05D007370 1.2e-38 163.7 91 86.8
HanXRQChr14g0454441 Helianthus annuus HOM05D005435 ORTHO05D007370 1.2e-38 163.7 94 80.9
arahy.Tifrunner.gnm1.ann1.2UY3HI Arachis hypogaea HOM05D005435 ORTHO05D007370 1.6e-38 163.3 175 55.4
AUR62038498 Chenopodium quinoa HOM05D005435 ORTHO05D007370 1.6e-38 163.3 91 83.5
Lsat_1_v5_gn_2_123940 Lactuca sativa HOM05D005435 ORTHO05D007370 1.6e-38 163.3 91 82.4
Lj1g0010500 Lotus japonicus HOM05D005435 ORTHO05D007370 1.6e-38 163.3 95 80.0
Rhsim12G0137200 Rhododendron simsii HOM05D005435 ORTHO05D007370 1.6e-38 163.3 94 80.9
SGA_v2.0_scaffold105G30289 Striga asiatica HOM05D005435 ORTHO05D007370 2.0e-38 162.9 92 82.6
Thhalv10013386m.g Eutrema salsugineum HOM05D005435 ORTHO05D007370 2.7e-38 162.5 93 79.6
Lalb_Chr01g0018691 Lupinus albus HOM05D005435 ORTHO05D007370 2.7e-38 162.5 155 56.8
Cc06_g19340 Coffea canephora HOM05D005435 ORTHO05D007370 4.5e-38 161.8 95 76.8
Glyma.03G183400 Glycine max HOM05D005435 ORTHO05D007370 5.9e-38 161.4 95 78.9
MSTRG.10790 Avicennia marina HOM05D005435 ORTHO05D007370 7.7e-38 161.0 92 82.6
Peaxi162Scf00454g00414 Petunia axillaris HOM05D005435 ORTHO05D007370 1.0e-37 160.6 92 82.6
Aa31LG1G21750 Aethionema arabicum HOM05D005435 ORTHO05D007370 1.7e-37 159.8 94 80.9
VMungo1383G0425 Vigna mungo HOM05D005435 ORTHO05D007370 1.7e-37 159.8 95 77.9
AL5G24820 Arabidopsis lyrata HOM05D005435 ORTHO05D007370 2.9e-37 159.1 94 79.8
C03p77020 Brassica napus HOM05D005435 ORTHO05D007370 6.5e-37 157.9 86 82.6
AT3G46100 Arabidopsis thaliana HOM05D005435 ORTHO05D007370 8.5e-37 157.5 96 76.0
A08p24260 Brassica napus HOM05D005435 ORTHO05D007370 8.5e-37 157.5 93 78.5
BcaNung05574 Brassica carinata HOM05D005435 ORTHO05D007370 1.5e-36 156.8 86 82.6
BraA08t34381Z Brassica rapa HOM05D005435 ORTHO05D007370 1.9e-36 156.4 93 77.4
Phvul.001G179200 Phaseolus vulgaris HOM05D005435 ORTHO05D007370 1.9e-36 156.4 95 76.8
unitig_899.g15642 Utricularia gibba HOM05D005435 ORTHO05D007370 2.5e-36 156.0 96 77.1
BolC3t19955H Brassica oleracea HOM05D005435 ORTHO05D007370 3.2e-36 155.6 86 81.4
FAN16G2384 Fragaria x ananassa HOM05D005435 ORTHO05D007370 9.4e-36 154.1 186 51.1
Oeu022974.1 Olea europaea HOM05D005435 ORTHO05D007370 4.7e-35 151.8 161 54.7
ECA238G4771 Erigeron canadensis HOM05D005435 ORTHO05D007370 2.6e-33 146.0 88 75.0
ATR1132G102 Amborella trichopoda HOM05D005435 ORTHO05D007370 5.7e-33 144.8 87 79.3
SEGI_35251 Sequoiadendron giganteum HOM05D005435 ORTHO05D007370 1.7e-32 143.3 94 72.3
CDE10G0836 Ceratophyllum demersum HOM05D005435 ORTHO05D007370 6.3e-32 141.4 93 69.9
Mapoly0007s0136 Marchantia polymorpha HOM05D005435 ORTHO05D007370 1.1e-31 140.6 92 73.9
AagrBONN_evm.TU.Sc2ySwM_117.1380 Anthoceros agrestis HOM05D005435 ORTHO05D007370 1.4e-31 140.2 90 73.3
Os02g0754700 Oryza sativa ssp. japonica HOM05D005435 ORTHO05D007370 1.2e-30 137.1 81 76.5
CBR_g45330 Chara braunii HOM05D005435 ORTHO05D007370 2.7e-30 136.0 91 70.3
vmacro16401 Vaccinium macrocarpon HOM05D005435 ORTHO05D007370 2.7e-30 136.0 139 52.5
Pp3c1_6360 Physcomitrium patens HOM05D005435 ORTHO05D007370 3.5e-30 135.6 81 77.8
HPP92_007175 Vanilla planifolia HOM05D005435 ORTHO05D007370 1.3e-29 133.7 81 76.5
Eucgr.K02931 Eucalyptus grandis HOM05D005435 ORTHO05D007370 5.0e-29 131.7 65 92.3
Pp3c7_24050 Physcomitrium patens HOM05D005435 ORTHO05D007370 1.5e-28 130.2 82 73.2
CAN.G1425.24 Capsicum annuum HOM05D005435 ORTHO05D007370 2.5e-28 129.4 65 92.3
SMO201G0114 Selaginella moellendorffii HOM05D000113 ORTHO05D001108 1.2e-27 127.1 86 68.6
SMO268G0040 Selaginella moellendorffii HOM05D005435 ORTHO05D007370 1.2e-27 127.1 81 72.8
GSVIVG01025735001 Vitis vinifera HOM05D005435 ORTHO05D007370 6.1e-27 124.8 65 89.2
CiPaw.09G172100 Carya illinoinensis HOM05D005435 ORTHO05D007370 3.0e-26 122.5 65 89.2
Manes.09G066100 Manihot esculenta HOM05D005435 ORTHO05D007370 8.9e-26 120.9 157 51.6
BcaC01g00217 Brassica carinata HOM05D005435 ORTHO05D007370 4.1e-23 112.1 86 65.1
CSS0050261 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-20 102.1 125 45.6
MCO12G364 Micromonas commoda HOM05D005435 ORTHO05D007370 1.2e-19 100.5 65 72.3
PRCOL_00000347 Prasinoderma coloniale HOM05D005435 ORTHO05D007370 3.6e-19 99.0 81 58.0
MCO02G110 Micromonas commoda HOM05D005435 ORTHO05D007370 8.0e-19 97.8 81 55.6
CSS0000486 Camellia sinensis var. sinensis HOM05D005435 ORTHO05D007370 2.3e-18 96.3 94 52.1
QL07p043263 Quercus lobata HOM05D005435 ORTHO05D007370 1.5e-17 93.6 53 88.7
PRCOL_00003807 Prasinoderma coloniale HOM05D005435 ORTHO05D007370 2.0e-17 93.2 65 67.7
FAN09G3909 Fragaria x ananassa HOM05D018720 ORTHO05D035658 4.6e-06 55.5 63 46.0


User provided reference genes

Program Settings