Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 2.5e-130 468.8 237 100.0
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 1.2e-103 380.2 241 80.5
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 9.3e-101 370.5 241 79.3
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 7.9e-100 367.5 261 74.3
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 5.7e-98 361.3 237 75.5
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 6.3e-97 357.8 245 75.5
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 8.2e-97 357.5 241 77.2
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 1.8e-96 356.3 243 78.2
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 2.4e-96 355.9 241 75.9
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 5.9e-95 351.3 248 74.6
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 5.9e-95 351.3 245 74.3
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 1.7e-94 349.7 241 73.0
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 3.8e-94 348.6 240 76.2
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 5.0e-94 348.2 246 74.0
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 6.5e-94 347.8 239 74.5
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 6.5e-94 347.8 239 74.5
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 4.2e-93 345.1 245 74.3
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 7.2e-93 344.4 243 75.3
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 9.4e-93 344.0 240 73.8
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 1.2e-92 343.6 239 74.1
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 1.2e-92 343.6 240 76.2
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 1.6e-92 343.2 236 74.6
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 2.7e-92 342.4 242 75.2
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 2.7e-92 342.4 244 74.2
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 6.1e-92 341.3 241 75.1
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 1.8e-91 339.7 247 72.5
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 3.9e-91 338.6 236 73.3
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 1.1e-90 337.0 238 74.8
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 1.5e-90 336.7 247 72.9
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 2.0e-90 336.3 240 74.6
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 4.3e-90 335.1 236 73.3
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 7.4e-90 334.3 250 71.6
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 2.2e-89 332.8 242 72.7
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 4.8e-89 331.6 239 72.4
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.4e-88 330.1 238 74.4
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.4e-88 330.1 238 74.4
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 1.8e-88 329.7 240 74.6
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.8e-88 329.7 240 74.6
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 6.9e-88 327.8 245 71.0
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 1.2e-87 327.0 242 70.7
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.5e-87 326.6 238 73.5
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.5e-87 326.6 238 73.9
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 2.6e-87 325.9 244 71.3
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 3.4e-87 325.5 241 72.6
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 7.7e-87 324.3 250 68.4
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 7.7e-87 324.3 240 70.4
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 7.7e-87 324.3 240 70.4
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 7.7e-87 324.3 240 73.8
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 3.8e-86 322.0 288 62.5
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 1.4e-85 320.1 241 69.7
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 1.4e-85 320.1 243 70.8
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 4.2e-85 318.5 239 69.0
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 9.4e-85 317.4 238 71.8
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 9.4e-85 317.4 245 69.8
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 3.6e-84 315.5 271 64.6
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 4.7e-84 315.1 242 68.2
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 7.9e-84 314.3 237 67.9
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 1.0e-83 313.9 239 71.5
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 1.1e-82 310.5 242 69.4
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 1.1e-82 310.5 243 69.1
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 2.0e-82 309.7 242 66.5
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 5.7e-82 308.1 242 65.3
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 1.3e-81 307.0 242 66.1
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 1.3e-81 307.0 243 65.4
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 2.2e-81 306.2 243 65.4
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 2.2e-81 306.2 245 68.6
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 3.7e-81 305.4 237 68.4
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 8.2e-81 304.3 187 75.4
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 8.2e-81 304.3 243 63.8
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 4.1e-80 302.0 238 66.4
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 1.5e-79 300.1 243 64.6
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 2.0e-79 299.7 242 65.7
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 4.5e-79 298.5 162 87.7
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 7.7e-79 297.7 160 86.9
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 7.7e-79 297.7 242 66.5
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 1.0e-78 297.4 245 64.5
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 1.0e-78 297.4 239 66.9
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 1.3e-78 297.0 266 60.9
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 2.9e-78 295.8 237 67.9
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 2.9e-78 295.8 237 67.9
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 2.9e-78 295.8 244 61.9
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 2.9e-78 295.8 245 63.7
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 8.5e-78 294.3 259 63.3
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 8.5e-78 294.3 237 67.5
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 8.5e-78 294.3 244 62.7
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 1.5e-77 293.5 237 65.0
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 2.5e-77 292.7 244 64.3
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 3.6e-76 288.9 237 65.8
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.6e-76 288.9 249 64.3
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 2.3e-75 286.2 237 65.4
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.0e-75 285.8 249 63.1
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.0e-75 285.8 249 63.1
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 1.5e-74 283.5 238 61.8
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 2.0e-74 283.1 284 57.7
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 3.8e-70 268.9 256 59.8
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 7.2e-69 264.6 237 60.8
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 4.4e-66 255.4 169 74.6
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 3.7e-65 252.3 129 92.2
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 8.3e-65 251.1 239 59.0
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 1.8e-59 233.4 190 69.5
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 4.4e-58 228.8 245 55.1
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 4.4e-58 228.8 189 59.8
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 2.4e-56 223.0 205 55.6
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 2.0e-55 219.9 252 51.2
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 1.0e-54 217.6 109 92.7
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 3.8e-54 215.7 131 77.9
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 8.0e-52 208.0 131 75.6
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 5.7e-50 201.8 185 60.5
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 6.6e-46 188.3 195 57.4
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 1.1e-45 187.6 191 58.6
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 1.5e-42 177.2 157 65.0
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 8.6e-38 161.4 90 82.2
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 4.1e-32 142.5 107 66.4
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 7.3e-29 131.7 103 63.1
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 1.1e-27 127.9 154 45.5
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 4.9e-25 119.0 95 66.3
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 5.4e-24 115.5 96 55.2
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 8.6e-22 108.2 54 92.6
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 3.1e-19 99.8 48 91.7
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 1.1e-16 91.3 56 76.8
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 5.1e-14 82.4 66 60.6
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 8.1e-12 75.1 38 81.6
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 4.6e-07 59.3 31 83.9
arahy.Tifrunner.gnm1.ann1.31G0Q2 Arachis hypogaea HOM05D006298 ORTHO05D082484 1.3e-06 57.8 34 73.5
Ca_27663_v3 Cicer arietinum L. HOM05D002033 ORTHO05D002181 6.6e-06 55.5 35 65.7


User provided reference genes

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