Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 1.0e-137 493.4 249 100.0
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 9.2e-99 364.0 273 71.8
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 1.1e-94 350.5 254 74.4
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 1.1e-94 350.5 258 70.5
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 2.3e-94 349.4 255 72.2
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 2.6e-93 345.9 262 70.2
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 5.8e-93 344.7 260 68.8
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 7.5e-93 344.4 258 71.7
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 3.7e-92 342.0 204 82.8
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 2.4e-91 339.3 263 70.0
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 4.1e-91 338.6 243 70.8
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 9.2e-91 337.4 245 71.4
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 1.6e-90 336.7 221 76.0
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 1.6e-90 336.7 182 89.0
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 2.0e-90 336.3 240 72.9
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 3.5e-90 335.5 259 67.2
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 3.5e-90 335.5 259 67.2
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 1.0e-89 334.0 263 69.6
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 1.0e-89 334.0 260 70.8
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 2.3e-89 332.8 274 65.3
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 3.9e-89 332.0 256 70.3
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 3.9e-89 332.0 261 68.2
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 5.0e-89 331.6 211 79.1
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 5.0e-89 331.6 241 71.0
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 5.0e-89 331.6 241 72.6
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 8.6e-89 330.9 222 75.7
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 1.9e-88 329.7 266 68.4
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 1.9e-88 329.7 223 74.4
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.9e-88 329.7 245 71.4
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 1.9e-88 329.7 253 68.0
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 9.5e-88 327.4 235 71.1
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 8.1e-87 324.3 261 67.0
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 1.1e-86 323.9 177 87.6
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 1.4e-86 323.6 201 79.1
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 1.4e-86 323.6 233 71.2
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 1.8e-86 323.2 267 65.5
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 4.0e-86 322.0 221 72.9
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 4.0e-86 322.0 256 67.6
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 6.8e-86 321.2 255 66.7
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 8.9e-86 320.9 190 83.2
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 1.2e-85 320.5 259 66.4
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 1.5e-85 320.1 253 67.2
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 5.8e-85 318.2 248 67.7
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 2.2e-84 316.2 261 65.9
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 8.3e-84 314.3 268 63.4
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 8.3e-84 314.3 210 76.7
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 2.4e-83 312.8 230 69.6
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 3.2e-83 312.4 257 64.6
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 9.2e-83 310.8 177 85.3
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 1.2e-82 310.5 249 66.3
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 1.0e-81 307.4 253 62.5
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.3e-81 307.0 249 65.9
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 1.7e-81 306.6 249 65.9
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 3.0e-81 305.8 232 66.4
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 3.9e-81 305.4 223 71.7
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 3.9e-81 305.4 246 66.7
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 6.6e-81 304.7 256 62.1
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 6.6e-81 304.7 253 62.1
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 8.6e-81 304.3 178 82.0
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 1.9e-80 303.1 256 62.1
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 1.9e-80 303.1 252 63.5
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 1.9e-80 303.1 237 67.1
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 1.9e-80 303.1 249 63.1
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 2.5e-80 302.8 262 63.0
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 2.5e-80 302.8 203 74.9
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 4.3e-80 302.0 232 68.1
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 5.6e-80 301.6 247 65.6
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 5.6e-80 301.6 224 67.0
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 7.3e-80 301.2 259 63.7
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 2.1e-79 299.7 234 63.7
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 2.8e-79 299.3 176 80.7
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 1.8e-78 296.6 213 71.4
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 2.0e-77 293.1 244 64.8
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 1.9e-75 286.6 249 63.1
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 4.6e-74 282.0 227 67.4
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 6.0e-74 281.6 254 59.8
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 6.6e-73 278.1 194 68.6
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 6.6e-73 278.1 192 71.4
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 3.3e-72 275.8 276 59.1
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 2.1e-71 273.1 250 58.8
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 6.2e-71 271.6 256 56.6
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 6.4e-68 261.5 265 56.6
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 8.4e-68 261.2 177 73.4
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 7.1e-67 258.1 184 70.1
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 1.9e-64 250.0 189 69.3
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 5.6e-64 248.4 192 64.6
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 9.6e-64 247.7 228 56.1
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 1.6e-63 246.9 192 71.4
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 6.2e-63 245.0 231 56.7
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 5.4e-59 231.9 145 79.3
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 3.5e-58 229.2 125 88.0
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 3.0e-57 226.1 123 89.4
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 3.4e-53 212.6 151 70.2
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 6.5e-44 181.8 183 54.6
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 4.2e-43 179.1 186 54.8
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 3.7e-39 166.0 94 83.0
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 6.7e-33 145.2 128 62.5
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 4.1e-30 136.0 70 94.3
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 5.1e-25 119.0 65 84.6
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 7.2e-19 98.6 58 82.8
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 1.7e-12 77.4 94 48.9


User provided reference genes

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