Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-93 346.7 181 100.0
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 2.2e-65 252.7 188 76.6
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 7.0e-64 247.7 189 76.2
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 1.7e-38 163.3 186 53.8
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 2.6e-34 149.4 186 50.5
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 9.8e-34 147.5 185 52.4
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 7.5e-26 121.3 182 45.1
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 1.5e-21 107.1 178 44.4
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 3.1e-19 99.4 179 43.0
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 5.2e-19 98.6 160 41.9
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.2e-18 97.4 120 50.0
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 2.0e-18 96.7 106 46.2
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.6e-18 96.3 121 45.5
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 5.8e-18 95.1 97 47.4
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 7.5e-18 94.7 98 51.0
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.7e-17 93.6 111 48.6
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 2.2e-17 93.2 102 53.9
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 2.2e-17 93.2 113 45.1
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 2.9e-17 92.8 102 53.9
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 3.7e-17 92.4 111 47.7
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.7e-17 92.4 111 48.6
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 3.7e-17 92.4 108 50.0
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 4.9e-17 92.0 102 53.9
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 6.4e-17 91.7 116 50.0
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 6.4e-17 91.7 116 50.0
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.4e-16 90.5 103 52.4
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.4e-16 90.5 111 47.7
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.4e-16 90.5 116 44.0
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 1.9e-16 90.1 111 47.7
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.9e-16 90.1 111 47.7
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 3.2e-16 89.4 91 56.0
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 3.2e-16 89.4 143 41.3
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.2e-16 89.4 143 41.3
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 4.1e-16 89.0 95 51.6
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 4.1e-16 89.0 107 48.6
QL02p080387 Quercus lobata HOM05D007277 ORTHO05D006336 4.1e-16 89.0 160 40.0
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 5.4e-16 88.6 177 40.7
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 9.2e-16 87.8 111 45.9
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.6e-15 87.0 108 45.4
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.6e-15 87.0 116 43.1
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 1.6e-15 87.0 113 47.8
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 3.5e-15 85.9 112 45.5
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 7.8e-15 84.7 106 43.4
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 7.8e-15 84.7 140 40.0
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 1.3e-14 84.0 123 41.5
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 3.0e-14 82.8 101 43.6
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 3.0e-14 82.8 107 43.0
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.9e-14 82.4 113 42.5
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 3.9e-14 82.4 108 42.6
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 5.1e-14 82.0 87 52.9
QL11p034196 Quercus lobata HOM05D007277 ORTHO05D006336 6.6e-14 81.6 137 40.9
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 8.6e-14 81.3 110 46.4
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 8.6e-14 81.3 115 41.7
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 1.5e-13 80.5 104 45.2
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 4.3e-13 79.0 99 47.5
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 4.3e-13 79.0 165 39.4
Cfa002610 Carpinus fangiana HOM05D007277 ORTHO05D006336 5.6e-13 78.6 100 49.0
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 7.3e-13 78.2 103 47.6
MD03G1010100 Malus domestica HOM05D007277 ORTHO05D006336 7.3e-13 78.2 99 46.5
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 9.6e-13 77.8 97 45.4
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 1.6e-12 77.0 136 39.0
FvH4_5g13221 Fragaria vesca HOM05D007277 ORTHO05D006336 2.8e-12 76.3 102 43.1
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 2.8e-12 76.3 115 37.4
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 4.7e-12 75.5 113 41.6
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 4.7e-12 75.5 106 37.7
FAN08G3205 Fragaria x ananassa HOM05D007277 ORTHO05D006336 6.2e-12 75.1 114 38.6
Actinidia24271 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.1e-11 74.3 95 41.1
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.1e-11 74.3 106 40.6
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 1.1e-11 74.3 113 39.8
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 1.1e-11 74.3 118 41.5
TAR636G1532 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.4e-11 73.9 112 37.5
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 1.8e-11 73.6 105 42.9
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 1.8e-11 73.6 105 43.8
QL07p042964 Quercus lobata HOM05D007277 ORTHO05D006336 1.8e-11 73.6 145 37.2
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 2.4e-11 73.2 115 40.0
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 3.1e-11 72.8 113 41.6
Prupe.6G011700 Prunus persica HOM05D007277 ORTHO05D006336 3.1e-11 72.8 112 37.5
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 3.1e-11 72.8 120 38.3
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 6.8e-11 71.6 94 44.7
FAN08G2286 Fragaria x ananassa HOM05D007277 ORTHO05D006336 6.8e-11 71.6 92 43.5
MD03G1009500 Malus domestica HOM05D007277 ORTHO05D006336 6.8e-11 71.6 111 42.3
MD12G1151700 Malus domestica HOM05D007277 ORTHO05D006336 6.8e-11 71.6 110 40.9
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 8.9e-11 71.2 108 40.7
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 8.9e-11 71.2 124 37.1
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 1.2e-10 70.9 114 42.1
MD11G1013900 Malus domestica HOM05D007277 ORTHO05D006336 1.5e-10 70.5 115 39.1
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.5e-10 70.5 106 44.3
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 1.5e-10 70.5 107 35.5
Thecc.03G111200 Theobroma cacao HOM05D007277 ORTHO05D006336 1.5e-10 70.5 157 35.7
Potri.017G019932 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.0e-10 70.1 107 42.1
Potri.017G019000 Populus trichocarpa HOM05D010635 ORTHO05D006336 3.4e-10 69.3 109 43.1
Sed0012100 Sechium edule HOM05D014519 ORTHO05D006336 3.4e-10 69.3 98 40.8
Potri.017G018901 Populus trichocarpa HOM05D010635 ORTHO05D006336 5.8e-10 68.6 107 41.1
Potri.017G021796 Populus trichocarpa HOM05D010635 ORTHO05D006336 7.6e-10 68.2 106 43.4
Gorai.006G107900 Gossypium raimondii HOM05D010298 ORTHO05D012539 9.9e-10 67.8 165 33.9
Gohir.D09G091480 Gossypium hirsutum HOM05D010298 ORTHO05D012539 1.3e-09 67.4 165 33.3
Haze_02030 Corylus avellana HOM05D007277 ORTHO05D006336 1.7e-09 67.0 93 46.2
Sabra17G0002100 Salix brachista HOM05D010635 ORTHO05D006336 1.7e-09 67.0 108 42.6
Thecc.09G294000 Theobroma cacao HOM05D010298 ORTHO05D012539 1.7e-09 67.0 117 35.0
Cfa002609 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.2e-09 66.6 115 43.5
Sabra17G0014600 Salix brachista HOM05D010635 ORTHO05D006336 2.2e-09 66.6 108 42.6
Gohir.A03G027800 Gossypium hirsutum HOM05D010298 ORTHO05D012539 3.8e-09 65.9 175 30.3
Gorai.001G066300 Gossypium raimondii HOM05D007277 ORTHO05D006336 3.8e-09 65.9 107 43.0
Sed0003907 Sechium edule HOM05D014519 ORTHO05D006336 3.8e-09 65.9 110 35.5
Gohir.D03G141000 Gossypium hirsutum HOM05D010298 ORTHO05D012539 6.4e-09 65.1 183 32.2
Gorai.003G147800 Gossypium raimondii HOM05D010298 ORTHO05D012539 6.4e-09 65.1 183 32.2
PGSC0003DMG400024518 Solanum tuberosum HOM05D007277 ORTHO05D006336 6.4e-09 65.1 163 30.1
Potri.007G133200 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.4e-08 63.9 179 31.8
TAR636G1074 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.4e-08 63.9 108 34.3
TAR636G3203 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.4e-08 63.9 108 35.2
TAR371G1039 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.9e-08 63.5 91 38.5
Gohir.A03G027600 Gossypium hirsutum HOM05D010298 ORTHO05D012539 3.2e-08 62.8 114 36.8
Atru.chr12.1464 Acer truncatum HOM05D007277 ORTHO05D006336 4.2e-08 62.4 162 31.5
TAR636G2604 Trochodendron aralioides HOM05D012741 ORTHO05D006336 7.1e-08 61.6 104 35.6
Gohir.A09G091466 Gossypium hirsutum HOM05D010298 ORTHO05D012539 1.6e-07 60.5 166 30.7
Thecc.09G294100 Theobroma cacao HOM05D010298 ORTHO05D012539 1.6e-07 60.5 117 37.6
TAR636G0488 Trochodendron aralioides HOM05D000568 ORTHO05D000628 1.6e-07 60.5 106 32.1
FAN08G2638 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.1e-07 60.1 76 50.0
MD12G1151900 Malus domestica HOM05D007277 ORTHO05D006336 2.1e-07 60.1 92 47.8
TAR371G0786 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.1e-07 60.1 158 32.3
ClCG04G011470 Citrullus lanatus HOM05D014519 ORTHO05D006336 2.7e-07 59.7 102 38.2
ClCG04G011490 Citrullus lanatus HOM05D014519 ORTHO05D006336 3.5e-07 59.3 106 34.0
Haze_24937 Corylus avellana HOM05D007277 ORTHO05D006336 3.5e-07 59.3 78 43.6
TAR371G1152 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.3e-06 57.4 98 33.7
COL.COLO4_19264 Corchorus olitorius HOM05D010298 ORTHO05D012539 6.6e-06 55.1 115 33.0


User provided reference genes

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