Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 5.8e-95 350.9 181 100.0
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 1.7e-54 216.5 184 72.3
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 5.4e-48 194.9 185 62.2
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 2.0e-34 149.8 193 50.3
QL07p042964 Quercus lobata HOM05D007277 ORTHO05D006336 4.9e-33 145.2 140 62.1
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 2.8e-28 129.4 185 48.1
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-27 127.5 181 47.5
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 2.6e-26 122.9 182 45.1
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 2.6e-26 122.9 194 43.3
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.1e-19 100.9 178 37.6
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.4e-19 100.5 177 37.9
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.2e-18 97.4 162 43.8
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 1.5e-18 97.1 195 35.9
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 1.3e-17 94.0 170 38.8
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.2e-17 93.2 167 39.5
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 2.2e-17 93.2 171 38.6
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 2.2e-17 93.2 136 40.4
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.9e-17 92.0 174 37.9
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 1.1e-16 90.9 126 44.4
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 1.4e-16 90.5 110 47.3
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 1.4e-16 90.5 104 46.2
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 1.9e-16 90.1 127 41.7
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 1.9e-16 90.1 126 44.4
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 1.9e-16 90.1 126 44.4
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.9e-16 90.1 174 39.1
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 4.1e-16 89.0 146 41.1
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 9.2e-16 87.8 119 44.5
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 1.2e-15 87.4 177 37.9
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 1.6e-15 87.0 156 37.2
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.1e-15 86.7 194 35.6
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.7e-15 86.3 171 36.3
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 2.7e-15 86.3 131 38.2
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 2.7e-15 86.3 101 43.6
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 3.5e-15 85.9 171 36.3
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 4.6e-15 85.5 111 44.1
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 6.0e-15 85.1 162 38.3
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 1.7e-14 83.6 152 38.8
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 2.3e-14 83.2 107 43.9
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 5.1e-14 82.0 111 41.4
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 6.6e-14 81.6 111 42.3
FAN08G3205 Fragaria x ananassa HOM05D007277 ORTHO05D006336 8.6e-14 81.3 93 46.2
QL02p080387 Quercus lobata HOM05D007277 ORTHO05D006336 8.6e-14 81.3 183 32.2
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 1.1e-13 80.9 116 39.7
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.5e-13 80.5 111 42.3
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 1.9e-13 80.1 148 37.2
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 2.5e-13 79.7 152 35.5
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 3.3e-13 79.3 108 47.2
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.3e-13 79.0 107 43.0
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 9.6e-13 77.8 114 37.7
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.6e-12 77.0 111 36.9
Potri.017G019000 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.6e-12 77.0 110 41.8
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 1.6e-12 77.0 108 44.4
MD11G1013900 Malus domestica HOM05D007277 ORTHO05D006336 2.1e-12 76.6 116 38.8
MD03G1010100 Malus domestica HOM05D007277 ORTHO05D006336 2.8e-12 76.3 141 36.2
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.8e-12 76.3 108 40.7
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 2.8e-12 76.3 114 43.0
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 3.6e-12 75.9 134 39.6
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 4.7e-12 75.5 178 34.8
Potri.017G019932 Populus trichocarpa HOM05D010635 ORTHO05D006336 4.7e-12 75.5 109 39.4
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 4.7e-12 75.5 108 38.0
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 6.2e-12 75.1 183 31.7
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 6.2e-12 75.1 111 40.5
Prupe.6G011700 Prunus persica HOM05D007277 ORTHO05D006336 6.2e-12 75.1 177 30.5
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 8.1e-12 74.7 127 34.6
Potri.017G021796 Populus trichocarpa HOM05D010635 ORTHO05D006336 8.1e-12 74.7 108 39.8
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 1.4e-11 73.9 103 45.6
FvH4_5g13221 Fragaria vesca HOM05D007277 ORTHO05D006336 1.8e-11 73.6 104 42.3
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 2.4e-11 73.2 117 39.3
MD12G1151700 Malus domestica HOM05D007277 ORTHO05D006336 2.4e-11 73.2 111 38.7
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 3.1e-11 72.8 179 31.8
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 3.1e-11 72.8 106 43.4
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 3.1e-11 72.8 121 37.2
Sabra17G0002100 Salix brachista HOM05D010635 ORTHO05D006336 3.1e-11 72.8 109 39.4
Sabra17G0014600 Salix brachista HOM05D010635 ORTHO05D006336 5.2e-11 72.0 109 39.4
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 8.9e-11 71.2 181 34.3
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 1.2e-10 70.9 103 43.7
Potri.017G018901 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.2e-10 70.9 109 37.6
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 1.5e-10 70.5 109 33.9
Thecc.03G111200 Theobroma cacao HOM05D007277 ORTHO05D006336 1.5e-10 70.5 152 33.6
MD03G1009500 Malus domestica HOM05D007277 ORTHO05D006336 2.6e-10 69.7 112 39.3
Cfa002610 Carpinus fangiana HOM05D007277 ORTHO05D006336 3.4e-10 69.3 141 36.9
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 4.4e-10 68.9 145 37.9
Sed0012100 Sechium edule HOM05D014519 ORTHO05D006336 4.4e-10 68.9 107 38.3
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 5.8e-10 68.6 109 38.5
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 7.6e-10 68.2 111 34.2
ClCG04G011490 Citrullus lanatus HOM05D014519 ORTHO05D006336 2.2e-09 66.6 108 38.0
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 2.2e-09 66.6 169 31.4
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.9e-09 66.2 111 35.1
Cfa002609 Carpinus fangiana HOM05D007277 ORTHO05D006336 3.8e-09 65.9 164 35.4
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 8.4e-09 64.7 168 31.5
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 1.1e-08 64.3 178 30.3
FAN08G2638 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.4e-08 63.2 80 48.8
Gorai.001G066300 Gossypium raimondii HOM05D007277 ORTHO05D006336 4.2e-08 62.4 106 39.6
Potri.007G133200 Populus trichocarpa HOM05D010635 ORTHO05D006336 5.4e-08 62.0 106 37.7
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 7.1e-08 61.6 103 34.0
PGSC0003DMG400024518 Solanum tuberosum HOM05D007277 ORTHO05D006336 7.1e-08 61.6 122 34.4
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 9.3e-08 61.2 91 45.1
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.1e-07 60.1 97 36.1
Atru.chr12.1464 Acer truncatum HOM05D007277 ORTHO05D006336 2.7e-07 59.7 154 29.9
Sed0003907 Sechium edule HOM05D014519 ORTHO05D006336 6.0e-07 58.5 175 26.9
TAR636G1532 Trochodendron aralioides HOM05D012741 ORTHO05D006336 6.0e-07 58.5 103 35.9
FAN08G2286 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.0e-06 57.8 92 41.3
ClCG04G011470 Citrullus lanatus HOM05D014519 ORTHO05D006336 1.3e-06 57.4 91 35.2
ClCG04G011480 Citrullus lanatus HOM05D014519 ORTHO05D006336 1.7e-06 57.0 99 33.3
Sabra07G0108000 Salix brachista HOM05D010635 ORTHO05D006336 1.7e-06 57.0 106 37.7
Sabra07G0108200 Salix brachista HOM05D010635 ORTHO05D006336 2.3e-06 56.6 106 36.8
Sabra07G0120400 Salix brachista HOM05D010635 ORTHO05D006336 3.9e-06 55.8 98 38.8
Sabra07G0108100 Salix brachista HOM05D010635 ORTHO05D006336 5.1e-06 55.5 106 35.8
Actinidia24271 Actinidia chinensis HOM05D007277 ORTHO05D006336 6.6e-06 55.1 97 33.0
FAN18G1844 Fragaria x ananassa HOM05D007277 ORTHO05D006336 8.7e-06 54.7 87 40.2


User provided reference genes

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