Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 8.1e-118 427.2 228 100.0
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 6.3e-46 188.3 185 62.2
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 2.0e-44 183.3 181 59.1
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 4.7e-41 172.2 193 56.5
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 9.1e-37 157.9 186 53.8
QL07p042964 Quercus lobata HOM05D007277 ORTHO05D006336 4.5e-36 155.6 145 64.8
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 8.6e-35 151.4 193 56.0
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 3.0e-32 142.9 183 51.4
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 5.6e-26 122.1 191 41.9
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 2.0e-23 113.6 188 41.5
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 1.6e-20 104.0 174 42.0
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.0e-20 103.6 176 41.5
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.6e-20 102.4 176 39.2
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 7.8e-20 101.7 176 39.2
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 7.8e-20 101.7 175 40.0
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.0e-19 101.3 175 40.0
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.7e-19 100.5 109 49.5
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.3e-19 100.1 109 49.5
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.9e-19 99.4 175 39.4
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 5.0e-19 99.0 110 47.3
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 8.6e-19 98.2 123 48.0
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 8.6e-19 98.2 177 39.0
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 8.6e-19 98.2 175 39.4
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.5e-18 96.7 168 42.9
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 5.6e-18 95.5 122 48.4
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 5.6e-18 95.5 122 48.4
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.6e-18 95.5 126 45.2
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 7.3e-18 95.1 126 43.7
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 7.3e-18 95.1 161 41.0
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.8e-17 93.2 122 46.7
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 4.7e-17 92.4 182 38.5
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 1.4e-16 90.9 104 50.0
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 1.4e-16 90.9 169 41.4
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.8e-16 90.5 99 49.5
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 4.0e-16 89.4 123 44.7
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 5.2e-16 89.0 134 39.6
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 6.8e-16 88.6 110 42.7
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 6.8e-16 88.6 106 46.2
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 2.0e-15 87.0 109 46.8
FvH4_5g13221 Fragaria vesca HOM05D007277 ORTHO05D006336 2.6e-15 86.7 111 43.2
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 3.4e-15 86.3 104 49.0
FAN08G3205 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.8e-15 85.5 100 44.0
QL02p080387 Quercus lobata HOM05D007277 ORTHO05D006336 5.8e-15 85.5 181 38.1
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 1.7e-14 84.0 110 44.5
Cfa002610 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.9e-14 83.2 147 42.2
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 4.9e-14 82.4 138 43.5
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 4.9e-14 82.4 110 45.5
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 8.3e-14 81.6 114 41.2
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 1.1e-13 81.3 104 47.1
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.1e-13 81.3 113 37.2
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 1.4e-13 80.9 136 41.9
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 3.2e-13 79.7 111 45.0
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 4.1e-13 79.3 113 41.6
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 4.1e-13 79.3 111 43.2
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 5.4e-13 79.0 124 42.7
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 1.2e-12 77.8 112 43.8
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 1.2e-12 77.8 115 41.7
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 2.7e-12 76.6 112 42.9
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 4.6e-12 75.9 114 43.9
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 6.0e-12 75.5 135 37.8
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 7.8e-12 75.1 157 36.3
Cfa002609 Carpinus fangiana HOM05D007277 ORTHO05D006336 7.8e-12 75.1 150 38.0
Potri.017G019932 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.0e-11 74.7 110 40.9
Potri.017G021796 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.3e-11 74.3 106 43.4
QL11p034196 Quercus lobata HOM05D007277 ORTHO05D006336 1.3e-11 74.3 168 35.1
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 1.7e-11 73.9 128 39.1
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.7e-11 73.9 106 43.4
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 1.7e-11 73.9 135 36.3
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 2.3e-11 73.6 114 36.8
Sed0012100 Sechium edule HOM05D014519 ORTHO05D006336 2.3e-11 73.6 105 42.9
TAR636G1532 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.3e-11 73.6 115 37.4
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 3.0e-11 73.2 94 47.9
MD03G1010100 Malus domestica HOM05D007277 ORTHO05D006336 3.9e-11 72.8 120 37.5
Prupe.6G011700 Prunus persica HOM05D007277 ORTHO05D006336 3.9e-11 72.8 112 37.5
Thecc.03G111200 Theobroma cacao HOM05D007277 ORTHO05D006336 3.9e-11 72.8 151 37.7
Haze_24937 Corylus avellana HOM05D007277 ORTHO05D006336 6.6e-11 72.0 132 40.9
Sabra17G0002100 Salix brachista HOM05D010635 ORTHO05D006336 6.6e-11 72.0 112 40.2
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 8.6e-11 71.6 112 36.6
Potri.017G019000 Populus trichocarpa HOM05D010635 ORTHO05D006336 8.6e-11 71.6 109 44.0
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 8.6e-11 71.6 106 36.8
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.1e-10 71.2 113 35.4
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 1.1e-10 71.2 125 38.4
Sabra17G0014600 Salix brachista HOM05D010635 ORTHO05D006336 1.1e-10 71.2 112 40.2
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 1.1e-10 71.2 126 34.9
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.5e-10 70.9 104 37.5
MD11G1013900 Malus domestica HOM05D007277 ORTHO05D006336 1.5e-10 70.9 114 36.8
Potri.017G018901 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.9e-10 70.5 110 40.0
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 1.9e-10 70.5 117 35.0
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 3.3e-10 69.7 110 39.1
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 3.3e-10 69.7 106 40.6
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 5.6e-10 68.9 94 43.6
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 5.6e-10 68.9 104 34.6
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 7.3e-10 68.6 117 35.9
Gorai.001G066300 Gossypium raimondii HOM05D007277 ORTHO05D006336 1.6e-09 67.4 179 34.6
Sed0003907 Sechium edule HOM05D014519 ORTHO05D006336 2.1e-09 67.0 105 38.1
FAN18G1844 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.8e-09 66.6 84 46.4
ClCG04G011470 Citrullus lanatus HOM05D014519 ORTHO05D006336 4.7e-09 65.9 110 39.1
PGSC0003DMG400024518 Solanum tuberosum HOM05D007277 ORTHO05D006336 6.2e-09 65.5 118 33.9
ClCG04G011490 Citrullus lanatus HOM05D014519 ORTHO05D006336 8.1e-09 65.1 106 39.6
FAN08G2286 Fragaria x ananassa HOM05D007277 ORTHO05D006336 8.1e-09 65.1 89 44.9
FAN08G2638 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.1e-08 64.7 82 46.3
MD03G1009500 Malus domestica HOM05D007277 ORTHO05D006336 1.1e-08 64.7 110 40.0
Potri.007G133200 Populus trichocarpa HOM05D010635 ORTHO05D006336 4.0e-08 62.8 161 32.9
Actinidia24271 Actinidia chinensis HOM05D007277 ORTHO05D006336 5.2e-08 62.4 98 35.7
MD12G1151700 Malus domestica HOM05D007277 ORTHO05D006336 5.2e-08 62.4 112 37.5
Sed0019610 Sechium edule HOM05D014519 ORTHO05D006336 5.2e-08 62.4 112 36.6
TAR636G0488 Trochodendron aralioides HOM05D000568 ORTHO05D000628 8.9e-08 61.6 113 32.7
TAR636G3203 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.6e-07 60.1 104 35.6
ClCG04G011480 Citrullus lanatus HOM05D014519 ORTHO05D006336 3.4e-07 59.7 124 36.3
Sabra07G0120400 Salix brachista HOM05D010635 ORTHO05D006336 3.4e-07 59.7 158 31.6
Haze_02030 Corylus avellana HOM05D007277 ORTHO05D006336 4.4e-07 59.3 76 46.1
Sabra07G0108200 Salix brachista HOM05D010635 ORTHO05D006336 1.7e-06 57.4 100 41.0
Sabra07G0120000 Salix brachista HOM05D010635 ORTHO05D006336 1.7e-06 57.4 164 30.5
Sabra07G0108000 Salix brachista HOM05D010635 ORTHO05D006336 2.2e-06 57.0 101 39.6
FvH4_5g13223 Fragaria vesca HOM05D007277 ORTHO05D006336 3.7e-06 56.2 96 38.5
TAR371G1039 Trochodendron aralioides HOM05D012741 ORTHO05D006336 6.4e-06 55.5 83 36.1
Atru.chr12.1464 Acer truncatum HOM05D007277 ORTHO05D006336 8.4e-06 55.1 167 29.3


User provided reference genes

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