Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 9.8e-81 303.5 165 100.0
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 5.1e-37 158.3 190 55.8
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 1.3e-32 143.7 185 52.4
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 2.9e-32 142.5 183 51.4
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 2.4e-31 139.4 190 51.1
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 9.0e-26 120.9 181 47.5
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 1.5e-25 120.2 170 48.8
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 2.0e-17 93.2 190 36.3
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 6.4e-16 88.2 165 37.0
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.1e-15 87.4 154 44.2
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.1e-15 87.4 164 36.0
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-15 87.4 189 36.0
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 1.1e-15 87.4 163 42.9
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 5.5e-15 85.1 101 53.5
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 5.5e-15 85.1 101 53.5
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 9.3e-15 84.3 133 44.4
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 9.3e-15 84.3 162 41.4
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 1.6e-14 83.6 137 40.9
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 1.6e-14 83.6 107 46.7
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.7e-14 82.8 101 51.5
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 4.6e-14 82.0 153 41.8
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 2.3e-13 79.7 116 41.4
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.1e-13 78.6 134 41.8
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 6.7e-13 78.2 134 41.8
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 6.7e-13 78.2 157 39.5
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 8.7e-13 77.8 158 38.0
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 8.7e-13 77.8 158 38.0
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 1.5e-12 77.0 158 38.0
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 1.5e-12 77.0 104 46.2
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.9e-12 76.6 158 37.3
QL07p042964 Quercus lobata HOM05D007277 ORTHO05D006336 1.9e-12 76.6 135 43.7
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 2.5e-12 76.3 109 45.0
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 2.5e-12 76.3 162 37.7
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 4.3e-12 75.5 136 40.4
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 7.4e-12 74.7 140 35.7
Thecc.03G111200 Theobroma cacao HOM05D007277 ORTHO05D006336 1.3e-11 73.9 147 40.8
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 1.6e-11 73.6 96 49.0
QL02p080387 Quercus lobata HOM05D007277 ORTHO05D006336 1.6e-11 73.6 108 40.7
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 3.7e-11 72.4 107 42.1
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 3.7e-11 72.4 113 38.1
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 4.8e-11 72.0 126 36.5
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 4.8e-11 72.0 126 38.1
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 1.1e-10 70.9 116 44.0
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 1.1e-10 70.9 158 38.0
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 1.4e-10 70.5 102 44.1
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 1.4e-10 70.5 167 33.5
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 2.4e-10 69.7 102 44.1
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.4e-10 69.7 167 31.7
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 2.4e-10 69.7 142 36.6
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 3.1e-10 69.3 127 41.7
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.1e-10 69.3 116 38.8
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 4.0e-10 68.9 137 38.0
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 6.9e-10 68.2 114 34.2
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 9.0e-10 67.8 99 41.4
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 9.0e-10 67.8 168 32.1
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 9.0e-10 67.8 126 39.7
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 1.2e-09 67.4 151 39.1
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.2e-09 67.4 109 41.3
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 1.2e-09 67.4 160 35.0
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 3.4e-09 65.9 102 43.1
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 3.4e-09 65.9 112 35.7
Cfa002609 Carpinus fangiana HOM05D007277 ORTHO05D006336 5.8e-09 65.1 97 48.5
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 5.8e-09 65.1 97 44.3
Actinidia24271 Actinidia chinensis HOM05D007277 ORTHO05D006336 7.6e-09 64.7 100 38.0
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 7.6e-09 64.7 108 40.7
FvH4_5g13221 Fragaria vesca HOM05D007277 ORTHO05D006336 1.0e-08 64.3 102 41.2
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 1.0e-08 64.3 128 36.7
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 1.0e-08 64.3 110 37.3
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 1.3e-08 63.9 143 35.0
FAN08G3205 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.3e-08 63.9 99 39.4
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 1.3e-08 63.9 106 35.8
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 1.3e-08 63.9 105 39.0
Haze_02030 Corylus avellana HOM05D007277 ORTHO05D006336 1.7e-08 63.5 78 47.4
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 1.7e-08 63.5 89 46.1
PGSC0003DMG400024518 Solanum tuberosum HOM05D007277 ORTHO05D006336 1.7e-08 63.5 159 33.3
TAR636G1532 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.2e-08 63.2 125 35.2
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 2.9e-08 62.8 105 41.9
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 3.8e-08 62.4 149 34.2
Prupe.6G011700 Prunus persica HOM05D007277 ORTHO05D006336 6.5e-08 61.6 112 33.0
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 8.4e-08 61.2 157 33.8
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 1.1e-07 60.8 94 43.6
Gorai.001G066300 Gossypium raimondii HOM05D007277 ORTHO05D006336 1.1e-07 60.8 162 35.2
TAR371G1039 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.4e-07 60.5 150 30.7
FAN08G2638 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.9e-07 60.1 75 49.3
QL11p034196 Quercus lobata HOM05D007277 ORTHO05D006336 4.2e-07 58.9 173 35.3
TAR636G1074 Trochodendron aralioides HOM05D012741 ORTHO05D006336 4.2e-07 58.9 157 31.2
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 5.5e-07 58.5 94 39.4
MD03G1010100 Malus domestica HOM05D007277 ORTHO05D006336 7.1e-07 58.2 121 34.7
Potri.007G133200 Populus trichocarpa HOM05D010635 ORTHO05D006336 7.1e-07 58.2 153 32.0
Potri.017G019932 Populus trichocarpa HOM05D010635 ORTHO05D006336 7.1e-07 58.2 113 36.3
Cfa002610 Carpinus fangiana HOM05D007277 ORTHO05D006336 9.3e-07 57.8 133 39.8
MD11G1013900 Malus domestica HOM05D007277 ORTHO05D006336 1.2e-06 57.4 167 29.3
MD03G1009500 Malus domestica HOM05D007277 ORTHO05D006336 1.6e-06 57.0 120 35.8
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.7e-06 56.2 113 36.3
MD12G1151700 Malus domestica HOM05D007277 ORTHO05D006336 3.5e-06 55.8 112 35.7
Potri.017G019000 Populus trichocarpa HOM05D010635 ORTHO05D006336 3.5e-06 55.8 111 36.9


User provided reference genes

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