Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 3.6e-94 348.2 170 100.0
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 2.9e-51 205.7 171 64.9
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 6.6e-48 194.5 171 62.0
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 2.1e-46 189.5 170 57.6
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 3.6e-46 188.7 171 59.6
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 4.7e-46 188.3 171 60.2
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 6.2e-46 188.0 172 59.9
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 1.0e-45 187.2 170 60.0
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 1.4e-45 186.8 176 58.5
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 1.8e-45 186.4 172 59.3
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 2.3e-45 186.0 172 59.3
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 5.2e-45 184.9 166 57.8
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 6.8e-45 184.5 166 57.8
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 1.5e-44 183.3 170 58.2
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 2.0e-44 183.0 169 56.2
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 2.6e-44 182.6 170 58.8
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 5.8e-44 181.4 173 56.1
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 9.8e-44 180.6 172 55.8
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.7e-43 179.9 170 58.2
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 1.7e-43 179.9 170 58.2
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 2.9e-43 179.1 171 57.3
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 6.4e-43 177.9 171 56.1
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 6.4e-43 177.9 170 56.5
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 8.3e-43 177.6 172 58.7
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 8.3e-43 177.6 170 57.6
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 1.1e-42 177.2 170 57.1
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 1.1e-42 177.2 173 57.2
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 1.4e-42 176.8 170 55.9
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 1.4e-42 176.8 173 55.5
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 1.9e-42 176.4 168 55.4
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 1.9e-42 176.4 171 55.0
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 1.9e-42 176.4 170 56.5
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 2.4e-42 176.0 171 54.4
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.4e-42 176.0 166 55.4
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 2.4e-42 176.0 172 57.0
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 2.4e-42 176.0 163 57.1
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.2e-42 175.6 171 53.8
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.2e-42 175.6 171 54.4
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 5.4e-42 174.9 172 57.6
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 5.4e-42 174.9 171 54.4
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 7.0e-42 174.5 172 53.5
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 7.0e-42 174.5 169 53.3
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 9.2e-42 174.1 170 52.4
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 9.2e-42 174.1 172 55.8
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 1.2e-41 173.7 172 56.4
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 1.2e-41 173.7 167 54.5
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 1.6e-41 173.3 171 55.0
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 2.0e-41 172.9 170 54.7
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 2.7e-41 172.6 170 51.2
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 3.5e-41 172.2 175 54.3
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 4.6e-41 171.8 174 55.2
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 4.6e-41 171.8 164 56.1
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 4.6e-41 171.8 188 53.2
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.0e-40 170.6 170 51.8
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 1.0e-40 170.6 162 53.7
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 1.7e-40 169.9 170 50.6
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 1.7e-40 169.9 170 50.6
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 1.7e-40 169.9 170 50.6
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.7e-40 169.9 170 51.8
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 1.7e-40 169.9 168 51.2
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 3.0e-40 169.1 172 57.0
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 3.0e-40 169.1 168 56.5
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 3.0e-40 169.1 164 54.9
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 3.9e-40 168.7 171 54.4
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 5.0e-40 168.3 170 50.6
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 6.6e-40 167.9 170 53.5
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 1.1e-39 167.2 170 51.8
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 1.1e-39 167.2 170 51.2
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 1.5e-39 166.8 170 51.2
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 1.5e-39 166.8 170 51.2
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 1.5e-39 166.8 170 54.1
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 1.5e-39 166.8 170 51.2
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 1.9e-39 166.4 171 52.6
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 2.5e-39 166.0 167 52.1
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 2.5e-39 166.0 170 52.9
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 3.3e-39 165.6 170 51.8
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 4.3e-39 165.2 172 50.6
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 7.3e-39 164.5 170 51.2
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 7.3e-39 164.5 170 53.5
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 1.6e-38 163.3 171 52.0
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 2.3e-37 159.5 148 56.8
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 5.2e-37 158.3 154 55.2
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 2.0e-36 156.4 161 49.7
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 5.8e-36 154.8 161 49.7
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 1.7e-35 153.3 165 52.1
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 1.2e-33 147.1 110 69.1
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.6e-33 146.7 150 51.3
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.1e-31 140.6 162 45.7
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 9.5e-31 137.5 155 51.0
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 2.8e-30 136.0 152 51.3
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 8.1e-30 134.4 158 45.6
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 1.1e-29 134.0 155 50.3
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 2.3e-29 132.9 170 48.8
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 6.8e-29 131.3 143 49.0
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 1.5e-28 130.2 95 69.5
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 3.4e-28 129.0 165 41.2
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 4.4e-28 128.6 148 45.9
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 9.9e-28 127.5 95 66.3
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 1.9e-26 123.2 165 40.0
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.1e-25 119.8 146 43.2
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 1.5e-23 113.6 134 47.0
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 6.2e-22 108.2 176 38.1
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 1.8e-21 106.7 120 50.0
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 2.4e-21 106.3 166 38.0
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 2.4e-21 106.3 148 39.2
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 5.2e-21 105.1 168 34.5
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 4.9e-19 98.6 158 36.1
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 3.2e-18 95.9 167 33.5
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 3.2e-18 95.9 167 34.1
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 4.6e-17 92.0 122 41.0
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 8.7e-16 87.8 52 80.8
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 5.6e-15 85.1 176 35.2
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 7.3e-15 84.7 63 58.7
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 1.3e-14 84.0 58 70.7
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 2.1e-14 83.2 172 36.0
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 3.6e-14 82.4 109 41.3
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.6e-12 76.3 61 57.4
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 4.6e-09 65.5 69 53.6
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 8.7e-08 61.2 39 71.8
MD15G1372000 Malus domestica HOM05D006897 ORTHO05D248129 8.1e-06 54.7 49 55.1


User provided reference genes

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