Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p042649 Quercus lobata HOM05D000001 ORTHO05D029619 3.8e-50 201.1 93 100.0
QL09p044438 Quercus lobata HOM05D000001 ORTHO05D000003 8.1e-16 87.0 76 61.8
Cfa002538 Carpinus fangiana HOM05D000001 ORTHO05D000003 8.9e-15 83.6 75 57.3
CiPaw.03G152300 Carya illinoinensis HOM05D000001 ORTHO05D000003 5.8e-14 80.9 81 54.3
Potri.014G191200 Populus trichocarpa HOM05D000001 ORTHO05D000003 2.1e-11 72.4 81 44.4
Lj3g0021876 Lotus japonicus HOM05D000001 ORTHO05D000003 3.5e-11 71.6 84 45.2
Sabra11G0055700 Salix brachista HOM05D000001 ORTHO05D029619 6.0e-11 70.9 80 42.5
Sabra11G0058800 Salix brachista HOM05D000001 ORTHO05D029619 6.0e-11 70.9 80 42.5
Prupe.8G207000 Prunus persica HOM05D000001 ORTHO05D000003 7.8e-11 70.5 76 51.3
Sabra14G0144100 Salix brachista HOM05D000001 ORTHO05D000003 1.0e-10 70.1 81 43.2
CANSAT01G1067 Cannabis sativa HOM05D000001 ORTHO05D000003 1.3e-10 69.7 74 50.0
Gorai.007G152300 Gossypium raimondii HOM05D000001 ORTHO05D000003 2.3e-10 68.9 77 46.8
Lalb_Chr07g0194081 Lupinus albus HOM05D000001 ORTHO05D000003 2.3e-10 68.9 83 43.4
Duzib211G0043 Durio zibethinus HOM05D000001 ORTHO05D000003 3.0e-10 68.6 78 47.4
MD05G1179700 Malus domestica HOM05D000001 ORTHO05D000003 3.0e-10 68.6 75 52.0
Gohir.D11G141900 Gossypium hirsutum HOM05D000001 ORTHO05D000003 5.1e-10 67.8 77 46.8
PGR083G0223 Punica granatum HOM05D000001 ORTHO05D000003 6.6e-10 67.4 75 45.3
Thecc.08G185900 Theobroma cacao HOM05D000001 ORTHO05D000003 1.1e-09 66.6 78 50.0
Gohir.A11G135600 Gossypium hirsutum HOM05D000001 ORTHO05D000003 1.9e-09 65.9 75 46.7
TPR.G5580 Trifolium pratense HOM05D000001 ORTHO05D000003 1.9e-09 65.9 76 46.1
THA.LOC104802683 Tarenaya hassleriana HOM05D000001 ORTHO05D000003 2.5e-09 65.5 82 43.9
FvH4_2g19570 Fragaria vesca HOM05D000001 ORTHO05D029619 3.3e-09 65.1 74 45.9
FAN24G1518 Fragaria x ananassa HOM05D000001 ORTHO05D000003 3.3e-09 65.1 74 45.9
Cpa.g.sc150.57 Carica papaya HOM05D000001 ORTHO05D000003 7.3e-09 63.9 79 44.3
CSS0011001 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000003 9.6e-09 63.5 82 41.5
CARHR284650 Cardamine hirsuta HOM05D000001 ORTHO05D000003 9.6e-09 63.5 85 42.4
Lsat_1_v5_gn_9_116720 Lactuca sativa HOM05D000001 ORTHO05D000003 1.3e-08 63.2 81 43.2
FAN27G2005 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.6e-08 62.8 74 47.3
AT5G48910 Arabidopsis thaliana HOM05D000001 ORTHO05D000003 2.1e-08 62.4 78 43.6
Dinv24227 Davidia involucrata HOM05D000001 ORTHO05D000003 2.1e-08 62.4 76 43.4
Aa31sc414G20 Aethionema arabicum HOM05D000001 ORTHO05D000003 2.8e-08 62.0 80 43.8
Carub.0008s0864 Capsella rubella HOM05D000001 ORTHO05D000003 2.8e-08 62.0 78 42.3
FAN15G0874 Fragaria x ananassa HOM05D000001 ORTHO05D000003 3.6e-08 61.6 74 44.6
Sp2g19300 Schrenkiella parvula HOM05D000001 ORTHO05D000003 3.6e-08 61.6 85 38.8
Phvul.001G227500 Phaseolus vulgaris HOM05D000001 ORTHO05D000003 4.8e-08 61.2 83 41.0
Ciclev10019256m.g Citrus clementina HOM05D000001 ORTHO05D000003 6.2e-08 60.8 90 41.1
Manes.12G043000 Manihot esculenta HOM05D000001 ORTHO05D000003 6.2e-08 60.8 76 44.7
Thhalv10003805m.g Eutrema salsugineum HOM05D000001 ORTHO05D000003 8.1e-08 60.5 80 40.0
Glyma.11G213300 Glycine max HOM05D000001 ORTHO05D000003 8.1e-08 60.5 81 38.3
arahy.Tifrunner.gnm1.ann1.5YE386 Arachis hypogaea HOM05D000001 ORTHO05D000003 1.1e-07 60.1 76 38.2
A06p38810 Brassica napus HOM05D000001 ORTHO05D000003 1.1e-07 60.1 93 37.6
arahy.Tifrunner.gnm1.ann1.W1UH9K Arachis hypogaea HOM05D000001 ORTHO05D000003 1.4e-07 59.7 76 38.2
BcaC06g30746 Brassica carinata HOM05D000001 ORTHO05D000003 1.4e-07 59.7 93 37.6
BraA06t26795Z Brassica rapa HOM05D000001 ORTHO05D000003 1.4e-07 59.7 93 37.6
Eucgr.A00379 Eucalyptus grandis HOM05D000001 ORTHO05D000003 1.4e-07 59.7 78 43.6
BcaC06g30725 Brassica carinata HOM05D000001 ORTHO05D000003 2.4e-07 58.9 84 38.1
Psat1g111080 Pisum sativum HOM05D000001 ORTHO05D011690 2.4e-07 58.9 73 42.5
BraA06t26797Z Brassica rapa HOM05D000001 ORTHO05D000003 4.0e-07 58.2 84 38.1
AL8G22140 Arabidopsis lyrata HOM05D000001 ORTHO05D000003 6.9e-07 57.4 74 43.2
C07p39510 Brassica napus HOM05D000001 ORTHO05D000003 6.9e-07 57.4 83 38.6
BolC7t44470H Brassica oleracea HOM05D000001 ORTHO05D000003 6.9e-07 57.4 83 38.6
Psat7g235320 Pisum sativum HOM05D000001 ORTHO05D000003 6.9e-07 57.4 82 40.2
A06p38770 Brassica napus HOM05D000001 ORTHO05D000003 9.0e-07 57.0 84 36.9
VMungo1383G3491 Vigna mungo HOM05D000001 ORTHO05D000003 9.0e-07 57.0 81 38.3
HanXRQChr06g0185001 Helianthus annuus HOM05D000001 ORTHO05D000003 1.2e-06 56.6 78 42.3
RcHm_v2.0_Chr6g0285331 Rosa chinensis HOM05D000001 ORTHO05D000003 1.2e-06 56.6 79 43.0
Sed0001293 Sechium edule HOM05D000001 ORTHO05D000003 1.2e-06 56.6 83 38.6
DCAR_015649 Daucus carota HOM05D000001 ORTHO05D000003 1.5e-06 56.2 75 37.3
ECA240G1941 Erigeron canadensis HOM05D003620 ORTHO05D004261 1.5e-06 56.2 87 36.8
Medtr6g060510 Medicago truncatula HOM05D000001 ORTHO05D011690 1.5e-06 56.2 73 42.5
MELO3C020999.2 Cucumis melo HOM05D000001 ORTHO05D000003 2.0e-06 55.8 65 41.5
MBI02_g18918_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 2.0e-06 55.8 77 33.8
Actinidia00245 Actinidia chinensis HOM05D000001 ORTHO05D000003 2.6e-06 55.5 82 40.2
Medtr6g060490 Medicago truncatula HOM05D000001 ORTHO05D034254 2.6e-06 55.5 67 43.3
THA.LOC104815802 Tarenaya hassleriana HOM05D000001 ORTHO05D000003 2.6e-06 55.5 81 37.0
Aa31LG5G6770 Aethionema arabicum HOM05D000001 ORTHO05D000003 3.4e-06 55.1 87 35.6
BcaB02g10280 Brassica carinata HOM05D000001 ORTHO05D000003 3.4e-06 55.1 96 34.4
MBI01_g44540_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 3.4e-06 55.1 71 42.3
Nn1g05154 Nelumbo nucifera HOM05D000001 ORTHO05D000003 3.4e-06 55.1 76 40.8
Rhsim11G0134400 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.4e-06 55.1 79 40.5
MD03G1072100 Malus domestica HOM05D000001 ORTHO05D000003 7.6e-06 53.9 73 41.1
ClCG09G009210 Citrullus lanatus HOM05D000001 ORTHO05D000003 9.9e-06 53.5 77 42.9
Lalb_Chr08g0236761 Lupinus albus HOM05D000001 ORTHO05D015837 9.9e-06 53.5 76 42.1


User provided reference genes

Program Settings