Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p042575 Quercus lobata HOM05D007354 ORTHO05D006294 3.0e-198 694.9 330 100.0
QL07p042502 Quercus lobata HOM05D007354 ORTHO05D006294 5.3e-179 630.9 331 90.6
QL04p032674 Quercus lobata HOM05D007354 ORTHO05D006294 6.4e-132 474.6 330 68.5
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 3.8e-68 262.7 321 45.2
QL01p036431 Quercus lobata HOM05D007354 ORTHO05D006294 1.3e-55 221.1 258 47.7
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 4.5e-53 212.6 320 40.0
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 1.6e-50 204.1 311 40.5
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 2.1e-50 203.8 311 39.9
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 5.7e-48 195.7 319 39.8
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 2.2e-47 193.7 317 38.8
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 5.9e-45 185.7 319 37.9
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 1.1e-43 181.4 323 38.7
vmacro07713 Vaccinium macrocarpon HOM05D007354 ORTHO05D006294 7.2e-43 178.7 327 36.7
QL07p041321 Quercus lobata HOM05D007354 ORTHO05D006294 2.8e-42 176.8 228 42.5
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 3.4e-40 169.9 321 34.6
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 3.7e-39 166.4 312 35.3
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 7.0e-38 162.2 312 34.6
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 2.7e-37 160.2 323 32.8
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 5.0e-36 156.0 348 33.3
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.5e-35 154.5 330 35.2
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 1.2e-34 151.4 318 32.7
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.4e-33 147.9 331 33.8
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 2.3e-33 147.1 329 30.4
QL04p042649 Quercus lobata HOM05D007354 ORTHO05D006294 3.1e-33 146.7 240 37.1
Thecc.05G074800 Theobroma cacao HOM05D007354 ORTHO05D006294 5.2e-33 146.0 266 36.1
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.0e-32 144.1 327 32.1
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.1e-30 138.3 326 34.0
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 5.4e-30 136.0 287 32.1
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 9.2e-30 135.2 311 29.6
Solyc09g005050.1 Solanum lycopersicum HOM05D007354 ORTHO05D006294 9.2e-30 135.2 359 28.1
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 9.2e-30 135.2 323 30.3
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 5.6e-27 125.9 276 31.9
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 7.3e-27 125.6 356 27.8
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 9.5e-27 125.2 312 26.9
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 2.1e-26 124.0 313 27.8
Migut.L00996 Erythranthe guttata HOM05D007354 ORTHO05D006294 3.6e-26 123.2 332 26.8
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 8.1e-26 122.1 323 28.5
Thecc.05G212300 Theobroma cacao HOM05D007354 ORTHO05D006294 8.1e-26 122.1 257 33.1
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.1e-25 121.7 310 27.4
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 4.0e-25 119.8 279 32.6
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 5.2e-25 119.4 311 27.7
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 2.0e-24 117.5 342 27.2
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 5.8e-24 115.9 327 29.4
Hma1.2p1_2464F.1_g322610 Hydrangea macrophylla HOM05D003035 ORTHO05D000440 1.3e-23 114.8 334 27.2
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 3.2e-22 110.2 317 30.0
Rhsim06G0216900 Rhododendron simsii HOM05D003035 ORTHO05D000440 5.4e-22 109.4 327 27.8
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 5.4e-22 109.4 335 27.8
PGSC0003DMG400002668 Solanum tuberosum HOM05D007354 ORTHO05D006294 7.1e-22 109.0 369 25.7
COL.COLO4_22268 Corchorus olitorius HOM05D007354 ORTHO05D006294 1.2e-21 108.2 341 27.9
COL.COLO4_22260 Corchorus olitorius HOM05D007354 ORTHO05D006294 6.0e-21 105.9 336 28.9
PGSC0003DMG400006262 Solanum tuberosum HOM05D007354 ORTHO05D006294 3.0e-20 103.6 334 25.7
Aqoxy5G03968 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 1.5e-19 101.3 310 26.8
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.2e-18 98.2 336 26.2
PSO675G7414 Papaver somniferum HOM05D003035 ORTHO05D000440 2.1e-18 97.4 361 25.2
PSO210G2788 Papaver somniferum HOM05D003035 ORTHO05D000440 2.8e-18 97.1 373 25.5
QL04p066901 Quercus lobata HOM05D007354 ORTHO05D006294 2.8e-18 97.1 120 42.5
PGSC0003DMG400002667 Solanum tuberosum HOM05D007354 ORTHO05D006294 3.6e-18 96.7 335 24.2
Nitab4.5_0006554g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 4.7e-18 96.3 175 34.9
Migut.C01116 Erythranthe guttata HOM05D007354 ORTHO05D006294 6.2e-18 95.9 310 25.8
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 8.1e-18 95.5 328 26.8
Nitab4.5_0001698g0100 Nicotiana tabacum HOM05D007354 ORTHO05D006294 8.1e-18 95.5 110 41.8
Cc10_g14350 Coffea canephora HOM05D007354 ORTHO05D006294 1.4e-17 94.7 156 33.3
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 1.4e-17 94.7 317 28.1
PSO478G2495 Papaver somniferum HOM05D003035 ORTHO05D000440 8.9e-17 92.0 384 24.2
Aqoxy4G02343 Aquilegia oxysepala HOM05D007354 ORTHO05D006294 1.5e-16 91.3 325 27.4
PSO732G0397 Papaver somniferum HOM05D003035 ORTHO05D000440 2.0e-16 90.9 350 26.0
PSO210G6216 Papaver somniferum HOM05D003035 ORTHO05D000440 5.8e-16 89.4 352 26.1
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 7.6e-16 89.0 360 26.7
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.9e-16 88.6 323 28.5
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 9.9e-16 88.6 359 25.6
Aqoxy6G00558 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.3e-15 88.2 297 26.6
Actinidia25469 Actinidia chinensis HOM05D007354 ORTHO05D006294 4.9e-15 86.3 206 33.5
PSO151G0151 Papaver somniferum HOM05D003035 ORTHO05D000440 6.4e-15 85.9 355 23.4
PSO210G1539 Papaver somniferum HOM05D003035 ORTHO05D000440 6.4e-15 85.9 357 26.6
Thecc.07G037700 Theobroma cacao HOM05D003035 ORTHO05D000440 1.1e-14 85.1 328 25.9
COL.COLO4_22279 Corchorus olitorius HOM05D007354 ORTHO05D006294 4.1e-14 83.2 134 43.3
Peaxi162Scf01233g00008 Petunia axillaris HOM05D007354 ORTHO05D006294 5.4e-14 82.8 308 26.9
PSO210G1368 Papaver somniferum HOM05D003035 ORTHO05D000440 1.2e-13 81.6 371 24.3
Duzib177G0200 Durio zibethinus HOM05D007354 ORTHO05D006294 1.6e-13 81.3 94 45.7
PSO675G7307 Papaver somniferum HOM05D003035 ORTHO05D000440 1.6e-13 81.3 354 24.3
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.1e-13 80.9 304 25.3
Nitab4.5_0013936g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.1e-13 80.9 157 35.0
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 3.5e-13 80.1 336 25.3
Migut.K01312 Erythranthe guttata HOM05D011758 ORTHO05D006294 4.6e-13 79.7 320 26.6
PGSC0003DMG400044861 Solanum tuberosum HOM05D007354 ORTHO05D006294 6.0e-13 79.3 220 27.3
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 7.8e-13 79.0 336 25.0
Thecc.07G037800 Theobroma cacao HOM05D003035 ORTHO05D000440 1.3e-12 78.2 332 25.6
PSO675G8679 Papaver somniferum HOM05D003035 ORTHO05D000440 3.0e-12 77.0 326 25.5
Thecc.07G037500 Theobroma cacao HOM05D003035 ORTHO05D006294 3.0e-12 77.0 284 26.4
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.0e-12 77.0 130 35.4
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 3.9e-12 76.6 293 27.0
PGSC0003DMG400045355 Solanum tuberosum HOM05D007354 ORTHO05D006294 3.9e-12 76.6 217 27.6
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 5.1e-12 76.3 336 25.3
Sopen09g005010 Solanum pennellii HOM05D009171 ORTHO05D006294 5.1e-12 76.3 94 39.4
MBI19_g39771_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 8.6e-12 75.5 233 25.8
MD06G1189300 Malus domestica HOM05D000151 ORTHO05D000074 8.6e-12 75.5 303 22.8
PSO478G3996 Papaver somniferum HOM05D003035 ORTHO05D006294 8.6e-12 75.5 375 23.2
PSO832G0982 Papaver somniferum HOM05D003035 ORTHO05D000440 8.6e-12 75.5 349 26.4
SGA_v2.0_scaffold24G10317 Striga asiatica HOM05D011758 ORTHO05D006294 8.6e-12 75.5 339 24.8
TAR629G0126 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.5e-11 73.9 301 22.6
Sopen09g004010 Solanum pennellii HOM05D007354 ORTHO05D006294 5.6e-11 72.8 367 22.9
SGA_v2.0_scaffold24G10398 Striga asiatica HOM05D011758 ORTHO05D006294 5.6e-11 72.8 336 23.8
MD14G1196300 Malus domestica HOM05D000151 ORTHO05D000074 7.3e-11 72.4 333 23.7
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 9.6e-11 72.0 305 24.6
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.6e-11 72.0 295 21.4
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 1.2e-10 71.6 315 25.4
Migut.F01441 Erythranthe guttata HOM05D011758 ORTHO05D006294 1.6e-10 71.2 321 24.3
Sopen09g004020 Solanum pennellii HOM05D000358 ORTHO05D006294 1.6e-10 71.2 94 37.2
PGSC0003DMG400046284 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.6e-10 71.2 117 32.5
Sopen01g005370 Solanum pennellii HOM05D002754 ORTHO05D003271 2.8e-10 70.5 95 38.9
Sopen09g004080 Solanum pennellii HOM05D007354 ORTHO05D006294 2.8e-10 70.5 95 38.9
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.2e-10 69.3 346 23.1
PGSC0003DMG400002709 Solanum tuberosum HOM05D007354 ORTHO05D006294 6.2e-10 69.3 95 34.7
SGA_v2.0_scaffold24G10418 Striga asiatica HOM05D011758 ORTHO05D006294 6.2e-10 69.3 329 23.4
TAR629G2629 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.1e-10 68.9 302 23.5
Aqoxy2G01390 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.1e-09 67.0 316 23.4
MSTRG.25800 Avicennia marina HOM05D000151 ORTHO05D000074 3.1e-09 67.0 321 22.4
Dinv36204 Davidia involucrata HOM05D003035 ORTHO05D000440 3.1e-09 67.0 291 24.4
AUR62031397 Chenopodium quinoa HOM05D000151 ORTHO05D000074 5.2e-09 66.2 313 22.4
Nitab4.5_0004281g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 6.8e-09 65.9 205 28.8
PSO801G0380 Papaver somniferum HOM05D003035 ORTHO05D006294 6.8e-09 65.9 127 30.7
Atru.chr9.2350 Acer truncatum HOM05D000151 ORTHO05D000074 8.9e-09 65.5 304 23.4
CDE05G0110 Ceratophyllum demersum HOM05D000151 ORTHO05D000074 1.2e-08 65.1 284 21.8
Aqoxy2G00614 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.5e-08 64.7 298 24.5
Eucgr.B03923 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.0e-08 64.3 338 22.8
PSO170G5576 Papaver somniferum HOM05D003035 ORTHO05D000440 2.0e-08 64.3 265 23.0
Aqoxy2G01392 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.6e-08 63.9 286 23.8
Hma1.2p1_0091F.1_g046550 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 3.4e-08 63.5 304 23.0
PSO541G0577 Papaver somniferum HOM05D003035 ORTHO05D000440 5.8e-08 62.8 156 28.2
COL.COLO4_29228 Corchorus olitorius HOM05D000151 ORTHO05D000074 9.9e-08 62.0 251 24.3
PSO210G4420 Papaver somniferum HOM05D003035 ORTHO05D000440 1.3e-07 61.6 114 31.6
TAR626G1895 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.7e-07 61.2 325 23.4
Actinidia28355 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.2e-07 60.8 337 24.0
Aqoxy3G01208 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.2e-07 60.8 294 23.8
PSO541G3079 Papaver somniferum HOM05D003035 ORTHO05D000440 2.2e-07 60.8 251 22.7
Duzib268G1496 Durio zibethinus HOM05D003035 ORTHO05D000440 3.8e-07 60.1 116 32.8
PSO782G4624 Papaver somniferum HOM05D003035 ORTHO05D000440 3.8e-07 60.1 98 33.7
Atru.chr10.13 Acer truncatum HOM05D000151 ORTHO05D000074 4.9e-07 59.7 273 22.0
EL10Ac4g07861 Beta vulgaris HOM05D003035 ORTHO05D000440 4.9e-07 59.7 130 32.3
Duzib213G0702 Durio zibethinus HOM05D003035 ORTHO05D000440 4.9e-07 59.7 114 36.0
TWI09G1230 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.9e-07 59.7 262 25.6
PSO017G2999 Papaver somniferum HOM05D001286 ORTHO05D000440 6.4e-07 59.3 231 25.1
Nitab4.5_0004281g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 8.4e-07 58.9 111 32.4
PSO210G0858 Papaver somniferum HOM05D003035 ORTHO05D000440 8.4e-07 58.9 326 24.5
PSO210G4205 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-06 58.5 94 31.9
PSO302G0092 Papaver somniferum HOM05D003035 ORTHO05D000440 1.4e-06 58.2 224 21.4
PSO017G5588 Papaver somniferum HOM05D003035 ORTHO05D000440 2.4e-06 57.4 90 32.2
PSO675G2182 Papaver somniferum HOM05D003035 ORTHO05D000440 2.4e-06 57.4 126 31.0
PSO478G2076 Papaver somniferum HOM05D003035 ORTHO05D000440 3.2e-06 57.0 95 27.4
Aqoxy6G01684 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 4.2e-06 56.6 287 23.7
PSO210G5942 Papaver somniferum HOM05D003035 ORTHO05D000440 5.4e-06 56.2 132 23.5
Aqoxy6G01235 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 7.1e-06 55.8 275 26.2


User provided reference genes

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