Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p042502 Quercus lobata HOM05D007354 ORTHO05D006294 2.0e-197 692.2 331 100.0
QL07p042575 Quercus lobata HOM05D007354 ORTHO05D006294 1.6e-178 629.4 331 90.6
QL04p032674 Quercus lobata HOM05D007354 ORTHO05D006294 1.5e-133 479.9 330 69.1
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 1.6e-69 267.3 321 45.8
QL01p036431 Quercus lobata HOM05D007354 ORTHO05D006294 1.8e-54 217.2 271 46.5
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 1.8e-54 217.2 321 39.3
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 2.5e-51 206.8 312 39.7
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 3.3e-51 206.5 312 39.7
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 1.3e-47 194.5 319 40.4
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 2.2e-47 193.7 320 39.7
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 1.8e-46 190.7 323 37.8
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 1.9e-43 180.6 322 38.2
vmacro07713 Vaccinium macrocarpon HOM05D007354 ORTHO05D006294 1.2e-42 177.9 329 37.4
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.2e-41 172.6 322 35.1
QL07p041321 Quercus lobata HOM05D007354 ORTHO05D006294 7.5e-40 168.7 228 41.7
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 6.4e-39 165.6 312 34.0
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 2.4e-38 163.7 323 33.7
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 1.2e-37 161.4 312 33.3
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 4.6e-37 159.5 353 32.3
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.5e-35 153.7 332 34.3
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 4.3e-35 152.9 307 31.9
QL04p042649 Quercus lobata HOM05D007354 ORTHO05D006294 4.3e-35 152.9 240 37.1
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 5.6e-35 152.5 324 31.2
Thecc.05G074800 Theobroma cacao HOM05D007354 ORTHO05D006294 2.1e-34 150.6 261 36.8
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 3.6e-34 149.8 332 33.7
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 3.4e-32 143.3 287 33.1
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 3.4e-32 143.3 325 30.5
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.1e-30 138.3 311 28.6
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.1e-30 136.3 358 29.1
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.2e-29 134.8 328 28.0
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.1e-29 134.0 325 32.6
Solyc09g005050.1 Solanum lycopersicum HOM05D007354 ORTHO05D006294 6.0e-29 132.5 362 28.2
Migut.L00996 Erythranthe guttata HOM05D007354 ORTHO05D006294 3.6e-26 123.2 333 27.0
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 4.7e-26 122.9 312 28.5
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 6.2e-26 122.5 315 28.6
Thecc.05G212300 Theobroma cacao HOM05D007354 ORTHO05D006294 8.1e-26 122.1 257 33.9
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 1.1e-25 121.7 315 28.6
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.4e-25 121.3 328 28.7
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 3.1e-25 120.2 285 31.2
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 3.1e-25 120.2 334 27.8
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 4.0e-25 119.8 323 28.2
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 5.2e-25 119.4 282 29.8
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 8.9e-25 118.6 311 27.3
PGSC0003DMG400002668 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.0e-24 117.5 368 26.6
COL.COLO4_22268 Corchorus olitorius HOM05D007354 ORTHO05D006294 1.4e-22 111.3 337 27.6
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 1.4e-22 111.3 330 26.7
PGSC0003DMG400006262 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.6e-21 107.8 335 26.6
Rhsim06G0216900 Rhododendron simsii HOM05D003035 ORTHO05D000440 2.1e-21 107.5 333 27.6
COL.COLO4_22260 Corchorus olitorius HOM05D007354 ORTHO05D006294 3.5e-21 106.7 337 30.3
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 4.6e-21 106.3 337 27.9
Hma1.2p1_2464F.1_g322610 Hydrangea macrophylla HOM05D003035 ORTHO05D000440 1.7e-20 104.4 333 25.2
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 3.0e-20 103.6 329 27.7
QL04p066901 Quercus lobata HOM05D007354 ORTHO05D006294 1.1e-19 101.7 120 41.7
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.5e-19 100.5 334 25.7
Aqoxy4G02343 Aquilegia oxysepala HOM05D007354 ORTHO05D006294 3.3e-19 100.1 332 28.3
PSO210G2788 Papaver somniferum HOM05D003035 ORTHO05D000440 9.6e-19 98.6 373 25.5
PSO675G7414 Papaver somniferum HOM05D003035 ORTHO05D000440 9.6e-19 98.6 374 24.3
Cc10_g14350 Coffea canephora HOM05D007354 ORTHO05D006294 2.1e-18 97.4 157 33.8
Nitab4.5_0001698g0100 Nicotiana tabacum HOM05D007354 ORTHO05D006294 4.7e-18 96.3 111 41.4
PSO210G6216 Papaver somniferum HOM05D003035 ORTHO05D000440 4.7e-18 96.3 350 25.7
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 1.4e-17 94.7 321 27.4
Nitab4.5_0006554g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.8e-17 94.4 174 34.5
PSO210G1539 Papaver somniferum HOM05D003035 ORTHO05D000440 2.4e-17 94.0 358 27.4
Migut.C01116 Erythranthe guttata HOM05D007354 ORTHO05D006294 5.2e-17 92.8 312 25.6
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 8.9e-17 92.0 360 26.9
PGSC0003DMG400002667 Solanum tuberosum HOM05D007354 ORTHO05D006294 8.9e-17 92.0 338 24.3
Aqoxy5G03968 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 2.0e-16 90.9 311 25.4
PSO732G0397 Papaver somniferum HOM05D003035 ORTHO05D000440 4.4e-16 89.7 355 26.2
PSO210G1368 Papaver somniferum HOM05D003035 ORTHO05D000440 5.8e-16 89.4 353 25.2
PSO151G0151 Papaver somniferum HOM05D003035 ORTHO05D000440 7.6e-16 89.0 357 24.6
PSO478G2495 Papaver somniferum HOM05D003035 ORTHO05D000440 7.6e-16 89.0 382 24.1
PSO675G7307 Papaver somniferum HOM05D003035 ORTHO05D000440 9.9e-16 88.6 354 24.9
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 2.2e-15 87.4 359 25.6
Thecc.07G037700 Theobroma cacao HOM05D003035 ORTHO05D000440 2.9e-15 87.0 328 26.2
Thecc.07G037800 Theobroma cacao HOM05D003035 ORTHO05D000440 1.1e-14 85.1 333 26.7
Peaxi162Scf01233g00008 Petunia axillaris HOM05D007354 ORTHO05D006294 3.2e-14 83.6 306 25.5
PGSC0003DMG400044861 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.2e-14 83.2 220 26.4
COL.COLO4_22279 Corchorus olitorius HOM05D007354 ORTHO05D006294 5.4e-14 82.8 134 41.0
Actinidia25469 Actinidia chinensis HOM05D007354 ORTHO05D006294 7.1e-14 82.4 205 32.2
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 7.1e-14 82.4 130 35.4
Duzib177G0200 Durio zibethinus HOM05D007354 ORTHO05D006294 2.7e-13 80.5 94 43.6
PSO832G0982 Papaver somniferum HOM05D003035 ORTHO05D000440 2.7e-13 80.5 346 26.0
MBI19_g39771_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 4.6e-13 79.7 334 24.3
SGA_v2.0_scaffold24G10317 Striga asiatica HOM05D011758 ORTHO05D006294 7.8e-13 79.0 332 25.6
PGSC0003DMG400045355 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.7e-12 77.8 218 27.1
Thecc.07G037500 Theobroma cacao HOM05D003035 ORTHO05D006294 1.7e-12 77.8 264 27.3
MBI19_g34542_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.3e-12 77.4 220 26.4
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.0e-12 77.0 304 24.7
Sopen09g005010 Solanum pennellii HOM05D009171 ORTHO05D006294 3.0e-12 77.0 104 38.5
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.9e-12 76.6 313 28.4
PGSC0003DMG400046284 Solanum tuberosum HOM05D007354 ORTHO05D006294 3.9e-12 76.6 125 32.0
CDE05G0110 Ceratophyllum demersum HOM05D000151 ORTHO05D000074 6.6e-12 75.9 284 22.2
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 1.5e-11 74.7 339 26.3
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 2.5e-11 73.9 339 26.3
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 4.3e-11 73.2 292 26.7
Nitab4.5_0013936g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 7.3e-11 72.4 154 32.5
Sopen09g004020 Solanum pennellii HOM05D000358 ORTHO05D006294 7.3e-11 72.4 104 36.5
Aqoxy6G00558 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.3e-10 71.6 301 23.9
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 1.3e-10 71.6 339 26.0
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 1.6e-10 71.2 316 24.7
PGSC0003DMG400002709 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.6e-10 71.2 103 35.9
MSTRG.25800 Avicennia marina HOM05D000151 ORTHO05D000074 4.8e-10 69.7 320 23.4
SGA_v2.0_scaffold24G10398 Striga asiatica HOM05D011758 ORTHO05D006294 4.8e-10 69.7 331 23.9
Sopen01g005370 Solanum pennellii HOM05D002754 ORTHO05D003271 6.2e-10 69.3 104 36.5
Sopen09g004080 Solanum pennellii HOM05D007354 ORTHO05D006294 6.2e-10 69.3 104 36.5
PSO801G0380 Papaver somniferum HOM05D003035 ORTHO05D006294 1.1e-09 68.6 126 31.0
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 1.1e-09 68.6 305 24.6
MBI19_g41824_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.8e-09 67.8 204 25.5
PSO541G3079 Papaver somniferum HOM05D003035 ORTHO05D000440 2.4e-09 67.4 257 23.3
PSO210G0201 Papaver somniferum HOM05D003035 ORTHO05D000440 3.1e-09 67.0 313 24.0
PSO541G0577 Papaver somniferum HOM05D003035 ORTHO05D000440 4.0e-09 66.6 158 28.5
Aqoxy2G01390 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.3e-09 66.2 317 23.7
Nitab4.5_0004281g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 5.3e-09 66.2 238 25.2
PSO170G5576 Papaver somniferum HOM05D003035 ORTHO05D000440 5.3e-09 66.2 265 23.8
Dinv36204 Davidia involucrata HOM05D003035 ORTHO05D000440 6.9e-09 65.9 292 25.0
Aqoxy2G00614 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.2e-08 65.1 296 24.0
PSO782G4624 Papaver somniferum HOM05D003035 ORTHO05D000440 1.5e-08 64.7 215 25.6
Actinidia28355 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.0e-08 64.3 351 24.2
Nitab4.5_0004281g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.0e-08 64.3 205 27.8
PSO013G0217 Papaver somniferum HOM05D003035 ORTHO05D000440 2.0e-08 64.3 217 24.9
SGA_v2.0_scaffold24G10418 Striga asiatica HOM05D011758 ORTHO05D006294 2.0e-08 64.3 331 23.0
TAR629G0126 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.0e-08 64.3 303 21.8
Duzib268G1496 Durio zibethinus HOM05D003035 ORTHO05D000440 2.6e-08 63.9 116 31.9
PSO210G0858 Papaver somniferum HOM05D003035 ORTHO05D000440 2.6e-08 63.9 327 25.4
MD06G1189300 Malus domestica HOM05D000151 ORTHO05D000074 3.4e-08 63.5 306 21.2
PSO210G4420 Papaver somniferum HOM05D003035 ORTHO05D000440 4.5e-08 63.2 114 30.7
PSO302G0092 Papaver somniferum HOM05D003035 ORTHO05D000440 4.5e-08 63.2 226 22.1
Aqoxy3G02149 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.8e-08 62.8 160 30.0
Aqoxy3G03918 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.8e-08 62.8 160 30.0
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.8e-08 62.8 297 21.9
Sopen09g004010 Solanum pennellii HOM05D007354 ORTHO05D006294 9.9e-08 62.0 104 32.7
PSO210G4205 Papaver somniferum HOM05D003035 ORTHO05D000440 1.3e-07 61.6 94 31.9
Eucgr.B03923 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.7e-07 61.2 342 22.2
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.2e-07 60.8 339 20.9
Duzib213G0702 Durio zibethinus HOM05D003035 ORTHO05D000440 2.2e-07 60.8 114 35.1
MD14G1196300 Malus domestica HOM05D000151 ORTHO05D000074 2.2e-07 60.8 336 22.3
PSO017G5588 Papaver somniferum HOM05D003035 ORTHO05D000440 4.9e-07 59.7 91 31.9
PSO017G2999 Papaver somniferum HOM05D001286 ORTHO05D000440 6.4e-07 59.3 286 24.1
PSO478G2076 Papaver somniferum HOM05D003035 ORTHO05D000440 6.4e-07 59.3 95 26.3
TWI09G1230 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 6.4e-07 59.3 258 26.7
TAR629G2629 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.4e-07 59.3 300 22.0
PSO210G3783 Papaver somniferum HOM05D003035 ORTHO05D006294 8.4e-07 58.9 128 25.0
Os03g0779800 Oryza sativa ssp. japonica HOM05D023874 ORTHO05D013619 1.1e-06 58.5 295 24.4
PSO675G2182 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-06 58.5 127 29.1
EL10Ac7g16907 Beta vulgaris HOM05D001286 ORTHO05D000440 1.9e-06 57.8 252 23.4
TWI09G0382 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.9e-06 57.8 356 23.9
Aqoxy3G01208 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.4e-06 57.4 292 22.9
Thecc.03G224900 Theobroma cacao HOM05D000151 ORTHO05D000074 3.2e-06 57.0 259 23.2
Lj6g0012948 Lotus japonicus HOM05D003035 ORTHO05D006294 7.1e-06 55.8 299 23.1
Gohir.A10G237000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 9.3e-06 55.5 284 23.2
PSO302G0205 Papaver somniferum HOM05D003035 ORTHO05D006294 9.3e-06 55.5 224 21.0


User provided reference genes

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