Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 3.8e-50 201.1 93 100.0
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 1.3e-37 159.5 74 97.3
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 8.6e-34 146.7 74 87.8
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 7.3e-33 143.7 74 85.1
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 2.8e-32 141.7 77 80.5
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 8.1e-32 140.2 74 81.1
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 1.1e-31 139.8 74 81.1
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 1.8e-31 139.0 74 83.8
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 2.3e-31 138.7 74 81.1
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 5.2e-31 137.5 86 75.6
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 5.2e-31 137.5 74 82.4
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 8.9e-31 136.7 74 81.1
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 1.2e-30 136.3 74 81.1
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 1.2e-30 136.3 86 72.1
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 1.5e-30 136.0 86 74.4
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 1.5e-30 136.0 74 79.7
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 1.5e-30 136.0 74 81.1
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 2.0e-30 135.6 74 81.1
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 2.6e-30 135.2 74 82.4
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 2.6e-30 135.2 74 79.7
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 2.6e-30 135.2 74 79.7
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 4.4e-30 134.4 74 78.4
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 4.4e-30 134.4 74 79.7
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 7.5e-30 133.7 74 82.4
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 9.8e-30 133.3 86 69.8
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 9.8e-30 133.3 74 81.1
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 1.3e-29 132.9 74 78.4
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 1.3e-29 132.9 74 78.4
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 1.3e-29 132.9 78 75.6
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 1.3e-29 132.9 74 79.7
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 1.3e-29 132.9 74 78.4
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 1.7e-29 132.5 74 75.7
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 1.7e-29 132.5 74 75.7
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 2.9e-29 131.7 74 77.0
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 2.9e-29 131.7 74 79.7
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 2.9e-29 131.7 75 78.7
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 2.9e-29 131.7 74 75.7
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 2.9e-29 131.7 74 79.7
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 3.7e-29 131.3 86 69.8
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 3.7e-29 131.3 74 79.7
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 3.7e-29 131.3 74 77.0
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 3.7e-29 131.3 74 74.3
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 6.4e-29 130.6 74 75.7
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 6.4e-29 130.6 74 77.0
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 6.4e-29 130.6 74 78.4
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 8.3e-29 130.2 74 75.7
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 1.1e-28 129.8 74 79.7
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 1.4e-28 129.4 75 77.3
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 1.4e-28 129.4 75 77.3
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 1.4e-28 129.4 80 75.0
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 1.9e-28 129.0 74 74.3
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 4.1e-28 127.9 74 75.7
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 7.1e-28 127.1 74 79.7
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 9.2e-28 126.7 75 74.7
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 1.2e-27 126.3 77 72.7
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 1.2e-27 126.3 77 72.7
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 1.2e-27 126.3 77 72.7
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 1.2e-27 126.3 74 73.0
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 2.1e-27 125.6 77 72.7
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 2.1e-27 125.6 86 69.8
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 2.1e-27 125.6 74 71.6
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 2.7e-27 125.2 74 73.0
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 3.5e-27 124.8 74 74.3
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 4.6e-27 124.4 74 75.7
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 4.6e-27 124.4 74 74.3
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 4.6e-27 124.4 74 74.3
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 4.6e-27 124.4 74 74.3
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 6.0e-27 124.0 74 74.3
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 6.0e-27 124.0 74 71.6
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 6.0e-27 124.0 74 73.0
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 7.8e-27 123.6 74 75.7
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 7.8e-27 123.6 74 74.3
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 7.8e-27 123.6 74 73.0
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 7.8e-27 123.6 74 74.3
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 1.0e-26 123.2 77 71.4
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 1.0e-26 123.2 77 71.4
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 1.3e-26 122.9 74 73.0
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.3e-26 122.9 74 71.6
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 1.7e-26 122.5 77 70.1
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 1.7e-26 122.5 74 71.6
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 1.7e-26 122.5 74 73.0
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 2.3e-26 122.1 77 71.4
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.3e-26 122.1 77 74.0
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.3e-26 122.1 77 74.0
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 2.3e-26 122.1 74 70.3
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 3.0e-26 121.7 74 73.0
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 3.0e-26 121.7 74 74.3
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 3.0e-26 121.7 74 71.6
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 3.9e-26 121.3 77 72.7
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.9e-26 121.3 77 72.7
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 1.1e-25 119.8 82 73.2
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 2.5e-25 118.6 63 81.0
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.5e-25 118.6 72 77.8
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 2.5e-25 118.6 74 70.3
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 2.8e-24 115.2 73 69.9
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 7.6e-22 107.1 88 58.0
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.7e-21 104.8 58 82.8
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 2.5e-17 92.0 78 52.6
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 2.1e-11 72.4 71 46.5


User provided reference genes

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