Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p041321 Quercus lobata HOM05D007354 ORTHO05D006294 2.4e-153 545.4 267 100.0
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 5.2e-84 315.1 221 72.4
QL04p032674 Quercus lobata HOM05D007354 ORTHO05D006294 7.9e-48 194.9 251 43.0
QL07p042575 Quercus lobata HOM05D007354 ORTHO05D006294 3.8e-42 176.0 228 42.5
QL07p042502 Quercus lobata HOM05D007354 ORTHO05D006294 2.7e-40 169.9 228 41.7
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 2.0e-35 153.7 222 38.7
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 2.6e-35 153.3 222 38.7
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 5.0e-34 149.1 222 38.7
QL01p036431 Quercus lobata HOM05D007354 ORTHO05D006294 5.0e-34 149.1 179 45.8
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 6.7e-31 138.7 228 36.0
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 3.7e-29 132.9 220 37.7
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 3.7e-29 132.9 220 37.7
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 8.2e-29 131.7 210 40.0
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 4.1e-28 129.4 209 37.8
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 2.0e-27 127.1 210 39.0
vmacro07713 Vaccinium macrocarpon HOM05D007354 ORTHO05D006294 1.3e-26 124.4 209 36.4
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 2.2e-26 123.6 208 39.9
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 2.8e-21 106.7 228 31.1
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 4.8e-21 105.9 226 32.7
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 4.8e-21 105.9 215 32.1
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 8.2e-21 105.1 218 30.7
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.3e-20 102.4 226 31.9
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 9.1e-20 101.7 237 34.2
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 9.1e-20 101.7 225 32.0
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 1.2e-19 101.3 228 30.7
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 2.0e-19 100.5 231 34.2
Thecc.05G212300 Theobroma cacao HOM05D007354 ORTHO05D006294 4.5e-19 99.4 221 33.9
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 7.7e-19 98.6 247 32.0
Thecc.05G074800 Theobroma cacao HOM05D007354 ORTHO05D006294 1.3e-18 97.8 182 35.7
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 2.2e-18 97.1 214 31.3
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 4.2e-17 92.8 217 30.4
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 5.5e-17 92.4 232 28.4
QL04p042649 Quercus lobata HOM05D007354 ORTHO05D006294 7.2e-17 92.0 157 33.8
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.1e-16 90.5 227 28.6
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 6.1e-16 89.0 226 30.1
COL.COLO4_22260 Corchorus olitorius HOM05D007354 ORTHO05D006294 8.0e-16 88.6 233 33.0
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.3e-15 87.0 226 27.9
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 6.8e-15 85.5 179 28.5
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 8.8e-15 85.1 187 31.6
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 1.2e-14 84.7 250 27.6
Migut.L00996 Erythranthe guttata HOM05D007354 ORTHO05D006294 1.2e-14 84.7 223 29.6
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.2e-14 84.7 223 27.4
Nitab4.5_0001698g0100 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.5e-14 84.3 116 37.1
Solyc09g005050.1 Solanum lycopersicum HOM05D007354 ORTHO05D006294 1.5e-14 84.3 255 28.6
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.4e-14 82.8 188 34.0
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 7.5e-14 82.0 267 26.2
Aqoxy3G03018 Aquilegia oxysepala HOM05D007794 ORTHO05D009810 1.3e-13 81.3 105 40.0
PSO210G6216 Papaver somniferum HOM05D003035 ORTHO05D000440 1.3e-13 81.3 218 25.2
COL.COLO4_22268 Corchorus olitorius HOM05D007354 ORTHO05D006294 2.2e-13 80.5 237 31.6
MBI16_g22434_MAGBIO Magnolia biondii HOM05D001458 ORTHO05D000074 2.2e-13 80.5 204 28.4
Migut.L00830 Erythranthe guttata HOM05D007354 ORTHO05D006294 8.3e-13 78.6 218 28.4
PSO732G0397 Papaver somniferum HOM05D003035 ORTHO05D000440 8.3e-13 78.6 244 23.0
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 1.8e-12 77.4 107 35.5
Cc10_g14350 Coffea canephora HOM05D007354 ORTHO05D006294 1.8e-12 77.4 137 31.4
PGSC0003DMG400046284 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.8e-12 77.4 103 40.8
PSO675G7414 Papaver somniferum HOM05D003035 ORTHO05D000440 4.1e-12 76.3 118 34.7
MBI19_g34542_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 5.4e-12 75.9 213 27.7
Lj6g0012480 Lotus japonicus HOM05D003035 ORTHO05D006294 7.0e-12 75.5 234 29.5
Duzib177G0200 Durio zibethinus HOM05D007354 ORTHO05D006294 9.1e-12 75.1 112 36.6
PSO801G0380 Papaver somniferum HOM05D003035 ORTHO05D006294 9.1e-12 75.1 102 35.3
PGSC0003DMG400006262 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.6e-11 74.3 253 27.3
PSO675G7307 Papaver somniferum HOM05D003035 ORTHO05D000440 2.7e-11 73.6 101 32.7
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.5e-11 73.2 208 26.4
MBI19_g41824_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 4.5e-11 72.8 199 27.6
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 4.5e-11 72.8 137 30.7
QL04p066901 Quercus lobata HOM05D007354 ORTHO05D006294 4.5e-11 72.8 120 35.0
Dinv03027 Davidia involucrata HOM05D000151 ORTHO05D000074 5.9e-11 72.4 238 27.3
Dinv36204 Davidia involucrata HOM05D003035 ORTHO05D000440 5.9e-11 72.4 192 28.1
MBI19_g39771_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 5.9e-11 72.4 218 27.1
Rhsim06G0216900 Rhododendron simsii HOM05D003035 ORTHO05D000440 5.9e-11 72.4 223 24.7
Sabra15G0044900 Salix brachista HOM05D002125 ORTHO05D002105 5.9e-11 72.4 157 29.9
PSO832G0982 Papaver somniferum HOM05D003035 ORTHO05D000440 1.0e-10 71.6 102 35.3
PGSC0003DMG400044861 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.0e-10 71.6 110 37.3
PSO339G0474 Papaver somniferum HOM05D003035 ORTHO05D000440 1.7e-10 70.9 101 34.7
Thecc.07G037500 Theobroma cacao HOM05D003035 ORTHO05D006294 1.7e-10 70.9 95 40.0
PSO782G4624 Papaver somniferum HOM05D003035 ORTHO05D000440 3.8e-10 69.7 102 34.3
PSO732G0047 Papaver somniferum HOM05D003035 ORTHO05D000440 5.0e-10 69.3 99 32.3
QL08p010458 Quercus lobata HOM05D003035 ORTHO05D000440 5.0e-10 69.3 247 30.0
Dinv36205 Davidia involucrata HOM05D001286 ORTHO05D000440 6.5e-10 68.9 92 37.0
Migut.K01312 Erythranthe guttata HOM05D011758 ORTHO05D006294 6.5e-10 68.9 219 27.4
FvH4_4g04480 Fragaria vesca HOM05D000151 ORTHO05D000074 8.5e-10 68.6 195 27.2
PSO017G5588 Papaver somniferum HOM05D003035 ORTHO05D000440 8.5e-10 68.6 81 34.6
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 1.1e-09 68.2 252 30.6
PGSC0003DMG400002668 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.1e-09 68.2 192 30.2
PSO151G0151 Papaver somniferum HOM05D003035 ORTHO05D000440 1.9e-09 67.4 102 30.4
Aqoxy6G00558 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.5e-09 67.0 200 27.5
Sabra15G0045600 Salix brachista HOM05D002125 ORTHO05D002105 2.5e-09 67.0 93 35.5
MBI11_g16162_MAGBIO Magnolia biondii HOM05D016808 ORTHO05D011090 3.2e-09 66.6 199 30.7
PGSC0003DMG400045355 Solanum tuberosum HOM05D007354 ORTHO05D006294 3.2e-09 66.6 112 36.6
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.2e-09 66.2 148 30.4
FAN12G2073 Fragaria x ananassa HOM05D004442 ORTHO05D002066 5.5e-09 65.9 194 27.3
Hma1.2p1_0908F.1_g235600 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 5.5e-09 65.9 138 31.2
TPR.G23591 Trifolium pratense HOM05D003035 ORTHO05D000440 7.2e-09 65.5 267 23.6
COL.COLO4_37147 Corchorus olitorius HOM05D007354 ORTHO05D006294 9.4e-09 65.1 173 30.1
PSO541G0577 Papaver somniferum HOM05D003035 ORTHO05D000440 9.4e-09 65.1 110 31.8
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 9.4e-09 65.1 105 40.0
Thecc.07G037700 Theobroma cacao HOM05D003035 ORTHO05D000440 9.4e-09 65.1 208 27.4
Hma1.2p1_0908F.1_g235590 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 1.2e-08 64.7 138 31.2
Duzib268G1496 Durio zibethinus HOM05D003035 ORTHO05D000440 2.1e-08 63.9 128 25.8
FAN17G1827 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.1e-08 63.9 183 28.4
PSO210G1539 Papaver somniferum HOM05D003035 ORTHO05D000440 2.1e-08 63.9 108 30.6
PSO541G1699 Papaver somniferum HOM05D003035 ORTHO05D000440 2.7e-08 63.5 106 29.2
Duzib213G0702 Durio zibethinus HOM05D003035 ORTHO05D000440 3.6e-08 63.2 119 32.8
Actinidia28021 Actinidia chinensis HOM05D007794 ORTHO05D009810 4.7e-08 62.8 133 29.3
MBI12_g40210_MAGBIO Magnolia biondii HOM05D000109 ORTHO05D011090 4.7e-08 62.8 114 36.0
PSO210G3833 Papaver somniferum HOM05D003035 ORTHO05D000440 4.7e-08 62.8 68 35.3
PSO478G2495 Papaver somniferum HOM05D003035 ORTHO05D000440 4.7e-08 62.8 217 20.3
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 6.1e-08 62.4 99 36.4
Sopen09g003390 Solanum pennellii HOM05D007354 ORTHO05D006294 6.1e-08 62.4 99 36.4
Rhsim05G0098900 Rhododendron simsii HOM05D007794 ORTHO05D009810 8.0e-08 62.0 138 29.0
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 8.0e-08 62.0 103 27.2
Migut.C01116 Erythranthe guttata HOM05D007354 ORTHO05D006294 1.0e-07 61.6 220 25.9
Nn3g21331 Nelumbo nucifera HOM05D007794 ORTHO05D009810 1.0e-07 61.6 110 33.6
PSO210G4257 Papaver somniferum HOM05D003035 ORTHO05D000440 1.0e-07 61.6 118 28.0
PSO339G3493 Papaver somniferum HOM05D003035 ORTHO05D000440 1.0e-07 61.6 102 30.4
Prupe.6G178100 Prunus persica HOM05D008995 ORTHO05D000074 1.0e-07 61.6 172 26.7
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 1.0e-07 61.6 233 29.2
Aqoxy4G02343 Aquilegia oxysepala HOM05D007354 ORTHO05D006294 1.4e-07 61.2 99 32.3
PSO210G6501 Papaver somniferum HOM05D003035 ORTHO05D000440 1.4e-07 61.2 77 40.3
Rhsim05G0099600 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.4e-07 61.2 138 26.1
Glyma.08G066300 Glycine max HOM05D007794 ORTHO05D009810 1.8e-07 60.8 209 23.4
PSO017G5637 Papaver somniferum HOM05D003035 ORTHO05D000440 1.8e-07 60.8 165 27.3
Rhsim05G0099400 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.8e-07 60.8 96 32.3
CANSAT01G2245 Cannabis sativa HOM05D000151 ORTHO05D000074 2.3e-07 60.5 181 26.0
Lj2P464T10 Lonicera japonica HOM05D000151 ORTHO05D000074 2.3e-07 60.5 229 24.9
PSO210G4420 Papaver somniferum HOM05D003035 ORTHO05D000440 2.3e-07 60.5 105 29.5
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 2.3e-07 60.5 237 24.1
TAR628G0991 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.3e-07 60.5 136 32.4
COL.COLO4_16997 Corchorus olitorius HOM05D000151 ORTHO05D000074 4.0e-07 59.7 169 25.4
Oeu059895.1 Olea europaea HOM05D007794 ORTHO05D009810 4.0e-07 59.7 133 29.3
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 4.0e-07 59.7 273 24.2
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 4.0e-07 59.7 102 26.5
RcHm_v2.0_Chr4g0395201 Rosa chinensis HOM05D000151 ORTHO05D000074 4.0e-07 59.7 186 28.0
PSO017G7062 Papaver somniferum HOM05D003035 ORTHO05D000440 5.2e-07 59.3 61 34.4
TWI38G1267 Tripterygium wilfordii HOM05D009259 ORTHO05D000074 5.2e-07 59.3 240 27.9
Aqoxy3G02149 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.8e-07 58.5 146 34.2
Aqoxy3G03918 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.8e-07 58.5 146 34.2
MBI19_g29860_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 8.8e-07 58.5 184 26.1
PSO210G0865 Papaver somniferum HOM05D003035 ORTHO05D000440 8.8e-07 58.5 95 33.7
PSO210G3783 Papaver somniferum HOM05D003035 ORTHO05D006294 8.8e-07 58.5 111 28.8
PSO478G2076 Papaver somniferum HOM05D003035 ORTHO05D000440 8.8e-07 58.5 99 30.3
Migut.N01108 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.2e-06 58.2 114 31.6
PSO541G3079 Papaver somniferum HOM05D003035 ORTHO05D000440 1.2e-06 58.2 99 27.3
PSO801G0245 Papaver somniferum HOM05D003035 ORTHO05D000440 1.2e-06 58.2 91 38.5
Rhsim05G0099000 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.2e-06 58.2 152 27.6
Lj5P174T68 Lonicera japonica HOM05D000151 ORTHO05D000074 1.5e-06 57.8 123 33.3
PSO210G4205 Papaver somniferum HOM05D003035 ORTHO05D000440 2.0e-06 57.4 89 31.5
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 2.6e-06 57.0 113 30.1
QL08p010298 Quercus lobata HOM05D003035 ORTHO05D000440 2.6e-06 57.0 113 30.1
TAR636G2284 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.6e-06 57.0 119 32.8
TAR636G2694 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.6e-06 57.0 119 32.8
PSO013G0217 Papaver somniferum HOM05D003035 ORTHO05D000440 3.4e-06 56.6 100 28.0
SGA_v2.0_scaffold24G10401 Striga asiatica HOM05D011758 ORTHO05D006294 3.4e-06 56.6 226 27.4
PSO210G0201 Papaver somniferum HOM05D003035 ORTHO05D000440 4.4e-06 56.2 123 28.5
vmacro00480 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 4.4e-06 56.2 131 27.5
Os03g0779800 Oryza sativa ssp. japonica HOM05D023874 ORTHO05D013619 7.5e-06 55.5 210 21.9
Atru.chr9.2350 Acer truncatum HOM05D000151 ORTHO05D000074 9.8e-06 55.1 94 35.1
Aqoxy2G02058 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.8e-06 55.1 160 25.0
Aqoxy6G01889 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.8e-06 55.1 156 28.2
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 9.8e-06 55.1 81 34.6
Dinv12036 Davidia involucrata HOM05D000151 ORTHO05D000074 9.8e-06 55.1 81 34.6
PSO210G1368 Papaver somniferum HOM05D003035 ORTHO05D000440 9.8e-06 55.1 97 33.0
QL09p046398 Quercus lobata HOM05D007794 ORTHO05D009810 9.8e-06 55.1 149 26.2
TAR365G0814 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.8e-06 55.1 119 32.8


User provided reference genes

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