Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p040328 Quercus lobata HOM05D001341 ORTHO05D001181 5.7e-68 260.8 129 100.0
QL07p039803 Quercus lobata HOM05D001341 ORTHO05D001181 1.5e-07 60.1 30 100.0
QL07p040372 Quercus lobata HOM05D001341 ORTHO05D001181 1.5e-07 60.1 30 100.0
QL01p013264 Quercus lobata HOM05D001341 ORTHO05D001181 3.3e-07 58.9 30 93.3
Cfa011249 Carpinus fangiana HOM05D001341 ORTHO05D001181 7.3e-07 57.8 30 90.0
Haze_02579 Corylus avellana HOM05D001341 ORTHO05D001181 7.3e-07 57.8 30 90.0
CiPaw.09G010500 Carya illinoinensis HOM05D001341 ORTHO05D001181 1.2e-06 57.0 30 93.3
Prupe.7G114700 Prunus persica HOM05D001341 ORTHO05D001181 1.2e-06 57.0 30 90.0
Haze_05594 Corylus avellana HOM05D001341 ORTHO05D001181 1.6e-06 56.6 30 86.7
DCAR_013374 Daucus carota HOM05D001341 ORTHO05D001181 2.1e-06 56.2 30 90.0
SGA_v2.0_scaffold102G29925 Striga asiatica HOM05D001341 ORTHO05D001181 2.1e-06 56.2 30 90.0
CiPaw.14G102300 Carya illinoinensis HOM05D001341 ORTHO05D001181 3.6e-06 55.5 30 86.7
DCAR_012180 Daucus carota HOM05D001341 ORTHO05D001181 3.6e-06 55.5 30 86.7
Lsat_1_v5_gn_6_39761 Lactuca sativa HOM05D001341 ORTHO05D001181 3.6e-06 55.5 30 86.7
Potri.009G146200 Populus trichocarpa HOM05D001341 ORTHO05D001181 3.6e-06 55.5 30 86.7
PGR142G2578 Punica granatum HOM05D001341 ORTHO05D001181 3.6e-06 55.5 30 86.7
Sabra09G0113100 Salix brachista HOM05D001341 ORTHO05D001181 3.6e-06 55.5 30 86.7
Sabra09G0115500 Salix brachista HOM05D001341 ORTHO05D001181 3.6e-06 55.5 30 86.7
SGA_v2.0_scaffold83G26403 Striga asiatica HOM05D001341 ORTHO05D001181 3.6e-06 55.5 30 90.0
unitig_736.g22398 Utricularia gibba HOM05D001341 ORTHO05D001181 3.6e-06 55.5 30 86.7
Haze_19567 Corylus avellana HOM05D001341 ORTHO05D001181 4.7e-06 55.1 30 90.0
Eucgr.J00465 Eucalyptus grandis HOM05D001341 ORTHO05D001181 4.7e-06 55.1 30 86.7
PGR102G1637 Punica granatum HOM05D001341 ORTHO05D001181 4.7e-06 55.1 30 90.0
GSVIVG01031366001 Vitis vinifera HOM05D001341 ORTHO05D001181 4.7e-06 55.1 30 90.0
arahy.Tifrunner.gnm1.ann1.65LFFQ Arachis hypogaea HOM05D001341 ORTHO05D001181 6.2e-06 54.7 30 90.0
arahy.Tifrunner.gnm1.ann1.S3VH2F Arachis hypogaea HOM05D001341 ORTHO05D001181 6.2e-06 54.7 30 90.0
CiPaw.13G139100 Carya illinoinensis HOM05D001341 ORTHO05D001181 6.2e-06 54.7 30 83.3
CDE08G0744 Ceratophyllum demersum HOM05D001341 ORTHO05D001181 6.2e-06 54.7 30 86.7
Ciclev10013051m.g Citrus clementina HOM05D001341 ORTHO05D001181 6.2e-06 54.7 30 86.7
Lj2g0006876 Lotus japonicus HOM05D001341 ORTHO05D001181 6.2e-06 54.7 30 83.3
Lalb_Chr22g0350661 Lupinus albus HOM05D001341 ORTHO05D001181 6.2e-06 54.7 30 90.0
Duzib093G1815 Durio zibethinus HOM05D001341 ORTHO05D001181 8.1e-06 54.3 30 83.3
Glyma.10G067800 Glycine max HOM05D001341 ORTHO05D001181 8.1e-06 54.3 30 86.7
HanXRQChr07g0197831 Helianthus annuus HOM05D001341 ORTHO05D001181 8.1e-06 54.3 30 83.3
Lsat_1_v5_gn_2_95861 Lactuca sativa HOM05D001341 ORTHO05D001181 8.1e-06 54.3 30 86.7
MD12G1022000 Malus domestica HOM05D001341 ORTHO05D001181 8.1e-06 54.3 30 86.7
Peaxi162Scf00091g01816 Petunia axillaris HOM05D001341 ORTHO05D001181 8.1e-06 54.3 30 86.7
RcHm_v2.0_Chr5g0043421 Rosa chinensis HOM05D001341 ORTHO05D001181 8.1e-06 54.3 30 83.3
RcHm_v2.0_Chr5g0043451 Rosa chinensis HOM05D001341 ORTHO05D001181 8.1e-06 54.3 30 83.3


User provided reference genes

Program Settings