Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 1.2e-83 313.2 157 100.0
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 1.1e-81 306.6 157 98.1
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 9.6e-70 266.9 157 81.5
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 1.3e-69 266.5 157 82.2
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 2.8e-69 265.4 157 78.3
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 2.0e-67 259.2 157 78.3
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 3.4e-67 258.5 149 82.6
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 4.5e-67 258.1 157 76.4
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 5.8e-67 257.7 156 77.6
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 5.8e-67 257.7 157 79.6
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 1.0e-66 256.9 156 76.3
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 1.3e-66 256.5 148 82.4
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 1.7e-66 256.1 147 81.6
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 2.2e-66 255.8 156 78.8
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 3.8e-66 255.0 156 78.2
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 1.4e-65 253.1 157 77.7
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 1.9e-65 252.7 151 78.1
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 1.9e-65 252.7 150 81.3
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 2.5e-65 252.3 151 80.1
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 2.5e-65 252.3 153 76.5
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 3.2e-65 251.9 151 78.8
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 3.2e-65 251.9 148 81.8
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 4.2e-65 251.5 157 75.2
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 5.5e-65 251.1 151 78.8
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 5.5e-65 251.1 157 73.2
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 7.1e-65 250.8 151 77.5
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 7.1e-65 250.8 150 79.3
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 9.3e-65 250.4 157 73.9
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 9.3e-65 250.4 156 75.0
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 1.2e-64 250.0 151 78.8
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 2.1e-64 249.2 150 78.7
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 2.1e-64 249.2 147 81.0
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 2.1e-64 249.2 148 81.8
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 2.7e-64 248.8 151 78.1
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 2.7e-64 248.8 149 78.5
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 4.6e-64 248.1 154 76.6
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 4.6e-64 248.1 148 80.4
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 6.0e-64 247.7 157 73.2
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 6.0e-64 247.7 157 75.2
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 7.9e-64 247.3 151 77.5
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 1.0e-63 246.9 157 73.2
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 1.0e-63 246.9 150 78.0
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 1.0e-63 246.9 151 76.8
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 1.3e-63 246.5 157 74.5
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 1.8e-63 246.1 153 73.9
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 2.3e-63 245.7 151 74.8
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 3.0e-63 245.4 157 73.2
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 3.0e-63 245.4 157 73.2
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 3.9e-63 245.0 151 76.8
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 5.1e-63 244.6 148 77.7
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 6.7e-63 244.2 148 78.4
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 8.7e-63 243.8 157 73.9
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 1.5e-62 243.0 157 73.9
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 1.9e-62 242.7 157 74.5
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 1.9e-62 242.7 146 78.1
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 3.3e-62 241.9 156 71.8
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 3.3e-62 241.9 157 73.2
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 4.3e-62 241.5 150 72.7
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 7.4e-62 240.7 157 72.6
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 7.4e-62 240.7 157 72.6
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 1.3e-61 240.0 157 70.7
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 1.6e-61 239.6 157 72.0
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 3.7e-61 238.4 145 78.6
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 4.8e-61 238.0 149 74.5
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 4.8e-61 238.0 157 71.3
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 4.8e-61 238.0 156 71.8
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 8.2e-61 237.3 157 70.1
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 1.1e-60 236.9 145 75.2
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 1.8e-60 236.1 148 74.3
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 2.4e-60 235.7 137 81.0
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 2.4e-60 235.7 157 70.1
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 4.1e-60 235.0 156 71.2
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 5.3e-60 234.6 151 70.9
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 6.9e-60 234.2 154 70.8
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 9.0e-60 233.8 151 70.9
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 2.6e-59 232.3 148 71.6
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 7.6e-59 230.7 151 70.2
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 1.0e-58 230.3 152 71.7
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 1.0e-58 230.3 157 68.2
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 1.0e-58 230.3 151 70.2
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 1.0e-58 230.3 147 72.8
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 5.0e-58 228.0 157 68.2
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 1.4e-57 226.5 153 69.9
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 7.2e-57 224.2 148 70.3
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 2.3e-55 219.2 154 66.9
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 8.7e-55 217.2 143 70.6
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 4.3e-54 214.9 156 67.9
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 9.7e-54 213.8 148 67.6
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 1.3e-53 213.4 146 69.2
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 1.6e-53 213.0 147 68.0
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 1.6e-53 213.0 154 65.6
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 3.7e-53 211.8 154 64.3
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 3.7e-53 211.8 148 66.9
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 1.1e-52 210.3 146 67.8
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 1.4e-52 209.9 154 63.0
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 3.1e-52 208.8 154 62.3
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 3.1e-52 208.8 156 65.4
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 4.1e-52 208.4 153 64.7
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 5.3e-52 208.0 153 64.7
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 5.3e-52 208.0 153 64.1
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 6.9e-52 207.6 154 63.0
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 6.9e-52 207.6 153 64.7
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 6.9e-52 207.6 154 63.0
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 9.1e-52 207.2 154 65.6
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 4.5e-51 204.9 142 65.5
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 7.7e-51 204.1 153 64.1
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 3.8e-50 201.8 146 65.1
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 7.2e-49 197.6 125 76.8
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 1.2e-48 196.8 147 61.2
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 7.9e-48 194.1 148 60.8
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 3.0e-47 192.2 121 75.2
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 3.9e-47 191.8 146 60.3
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 3.3e-46 188.7 153 62.1
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 1.7e-45 186.4 145 57.9
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 7.7e-43 177.6 124 67.7
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 3.9e-39 165.2 135 65.9
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 5.2e-39 164.9 148 52.7
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 1.5e-38 163.3 131 60.3
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 1.7e-37 159.8 98 73.5
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 3.7e-37 158.7 148 52.7
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 2.4e-36 156.0 154 45.5
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 2.4e-36 156.0 110 68.2
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 5.3e-36 154.8 145 51.7
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 7.0e-36 154.5 144 52.8
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 3.2e-33 145.6 143 54.5
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 8.0e-32 141.0 97 66.0
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 1.3e-29 133.7 145 50.3
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 2.4e-28 129.4 97 60.8
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 2.7e-27 125.9 141 47.5
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 1.5e-25 120.2 146 44.5
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 1.2e-24 117.1 150 46.0
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 1.5e-22 110.2 75 66.7
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 4.4e-22 108.6 85 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 2.4e-20 102.8 84 54.8


User provided reference genes

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