Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p038760 Quercus lobata HOM05D000030 ORTHO05D000031 6.9e-41 170.2 88 100.0
QL03p018711 Quercus lobata HOM05D000030 ORTHO05D000009 4.3e-19 97.8 75 62.7
QL03p065377 Quercus lobata HOM05D000030 ORTHO05D000009 4.3e-19 97.8 78 59.0
Rhsim09G0036100 Rhododendron simsii HOM05D000447 ORTHO05D000009 3.9e-12 74.7 83 43.4
Rhsim05G0098200 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.1e-12 74.3 78 46.2
Rhsim01G0147200 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.8e-12 73.6 83 42.2
RcHm_v2.0_Chr1g0330231 Rosa chinensis HOM05D000030 ORTHO05D000031 1.5e-11 72.8 76 43.4
COL.COLO4_03752 Corchorus olitorius HOM05D000030 ORTHO05D000031 2.0e-11 72.4 77 44.2
PGR044G2094 Punica granatum HOM05D000030 ORTHO05D000009 2.5e-11 72.0 77 42.9
PGR083G0765 Punica granatum HOM05D000030 ORTHO05D000009 2.5e-11 72.0 77 42.9
PGR102G1721 Punica granatum HOM05D000030 ORTHO05D000009 2.5e-11 72.0 77 42.9
Rhsim05G0096700 Rhododendron simsii HOM05D002753 ORTHO05D003097 2.5e-11 72.0 80 45.0
PGR142G3856 Punica granatum HOM05D000030 ORTHO05D000031 9.7e-11 70.1 77 41.6
FvH4_4g06652 Fragaria vesca HOM05D004580 ORTHO05D000031 1.7e-10 69.3 67 46.3
COL.COLO4_19546 Corchorus olitorius HOM05D000030 ORTHO05D000031 2.2e-10 68.9 78 43.6
PGR083G1738 Punica granatum HOM05D000030 ORTHO05D000031 2.2e-10 68.9 77 42.9
Aqoxy3G01973 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 2.8e-10 68.6 78 44.9
PGR119G1248 Punica granatum HOM05D000030 ORTHO05D000009 2.8e-10 68.6 77 42.9
Aqoxy7G02382 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 3.7e-10 68.2 79 43.0
QL02p074905 Quercus lobata HOM05D000030 ORTHO05D000009 3.7e-10 68.2 48 64.6
Aqoxy1G02632 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 4.8e-10 67.8 78 44.9
Atru.chr1.2377 Acer truncatum HOM05D000030 ORTHO05D000031 6.3e-10 67.4 67 46.3
Aqoxy4G00960 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 6.3e-10 67.4 78 43.6
COL.COLO4_27430 Corchorus olitorius HOM05D000030 ORTHO05D000031 6.3e-10 67.4 77 41.6
PGR031G0853 Punica granatum HOM05D000030 ORTHO05D000009 6.3e-10 67.4 77 44.2
Aqoxy1G03509 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 8.2e-10 67.0 78 43.6
Aqoxy6G02576 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 8.2e-10 67.0 79 44.3
Aqoxy7G02841 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 8.2e-10 67.0 78 43.6
HanXRQChr17g0554281 Helianthus annuus HOM05D000030 ORTHO05D000009 1.4e-09 66.2 79 44.3
RcHm_v2.0_Chr4g0427661 Rosa chinensis HOM05D000030 ORTHO05D000009 2.4e-09 65.5 70 40.0
Aqoxy2G02219 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 3.1e-09 65.1 79 41.8
COL.COLO4_24422 Corchorus olitorius HOM05D000030 ORTHO05D000031 4.1e-09 64.7 77 40.3
Thecc.06G002000 Theobroma cacao HOM05D000030 ORTHO05D000009 4.1e-09 64.7 67 46.3
HanXRQChr12g0374831 Helianthus annuus HOM05D000030 ORTHO05D000009 5.3e-09 64.3 79 41.8
Hund18167 Selenicereus undatus HOM05D015999 ORTHO05D000031 6.9e-09 63.9 82 40.2
MD10G1273100 Malus domestica HOM05D000030 ORTHO05D000009 1.2e-08 63.2 80 40.0
Oeu010910.1 Olea europaea HOM05D000105 ORTHO05D000023 1.2e-08 63.2 67 41.8
RcHm_v2.0_Chr1g0315421 Rosa chinensis HOM05D000030 ORTHO05D000009 2.0e-08 62.4 57 47.4
Aqoxy5G03111 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 2.6e-08 62.0 79 41.8
FvH4_6g17101 Fragaria vesca HOM05D023840 ORTHO05D000031 4.5e-08 61.2 70 47.1
QL01p042188 Quercus lobata HOM05D000030 ORTHO05D000031 5.9e-08 60.8 47 59.6
Cc00_g34900 Coffea canephora HOM05D000030 ORTHO05D000009 7.7e-08 60.5 48 54.2
PGR064G0018 Punica granatum HOM05D000030 ORTHO05D000009 1.0e-07 60.1 46 54.3
Oeu005920.1 Olea europaea HOM05D000105 ORTHO05D000023 2.2e-07 58.9 67 41.8
HanXRQChr07g0195831 Helianthus annuus HOM05D000030 ORTHO05D000031 2.9e-07 58.5 47 55.3
Atru.chr3.1976 Acer truncatum HOM05D000030 ORTHO05D000031 3.8e-07 58.2 47 51.1
AUR62004707 Chenopodium quinoa HOM05D000030 ORTHO05D000031 3.8e-07 58.2 85 35.3
Hma1.2p1_0055F.1_g031250 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 5.0e-07 57.8 83 43.4
PGR119G1072 Punica granatum HOM05D000030 ORTHO05D000009 5.0e-07 57.8 46 52.2
ECA233G5349 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.5e-07 57.4 76 40.8
Hma1.2p1_0314F.1_g121830 Hydrangea macrophylla HOM05D000030 ORTHO05D000031 6.5e-07 57.4 75 44.0
Hund15647 Selenicereus undatus HOM05D000030 ORTHO05D000031 6.5e-07 57.4 77 36.4
Oeu022538.1 Olea europaea HOM05D000105 ORTHO05D000023 8.5e-07 57.0 67 38.8
Hund07284 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.1e-06 56.6 77 36.4
Hund11638 Selenicereus undatus HOM05D000030 ORTHO05D000031 1.1e-06 56.6 77 36.4
Hund20102 Selenicereus undatus HOM05D000030 ORTHO05D000031 1.1e-06 56.6 77 36.4
Hund25690 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.1e-06 56.6 77 36.4
Aqoxy2G01304 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 1.4e-06 56.2 82 36.6
ECA232G1081 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.4e-06 56.2 66 43.9
TWI60G0105 Tripterygium wilfordii HOM05D000030 ORTHO05D000031 1.4e-06 56.2 75 41.3
EL10Ac3g06711 Beta vulgaris HOM05D000030 ORTHO05D000031 1.9e-06 55.8 73 42.5
SHI16275 Sapria himalayana HOM05D000030 ORTHO05D000031 1.9e-06 55.8 61 39.3
Hund30261 Selenicereus undatus HOM05D000030 ORTHO05D000031 1.9e-06 55.8 77 35.1
Hund30264 Selenicereus undatus HOM05D000030 ORTHO05D000031 1.9e-06 55.8 77 35.1
EL10Ac4g09468 Beta vulgaris HOM05D000030 ORTHO05D000031 2.5e-06 55.5 84 34.5
FvH4_6g47670 Fragaria vesca HOM05D000030 ORTHO05D000009 2.5e-06 55.5 69 36.2
Gorai.012G102500 Gossypium raimondii HOM05D000030 ORTHO05D000009 2.5e-06 55.5 44 50.0
MBI19_g37433_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000031 3.2e-06 55.1 44 50.0
QL02p069415 Quercus lobata HOM05D000030 ORTHO05D000009 3.2e-06 55.1 77 40.3
Rhsim12G0116300 Rhododendron simsii HOM05D000030 ORTHO05D000031 3.2e-06 55.1 61 42.6
SHI06242 Sapria himalayana HOM05D000030 ORTHO05D000031 3.2e-06 55.1 73 41.1
Hund12458 Selenicereus undatus HOM05D000030 ORTHO05D000009 3.2e-06 55.1 77 37.7
TWI74G1629 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 3.2e-06 55.1 50 50.0
Ah.07g200230 Amaranthus hybridus HOM05D000030 ORTHO05D000031 4.2e-06 54.7 60 45.0
Aqoxy5G02945 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 4.2e-06 54.7 63 42.9
Gorai.005G104500 Gossypium raimondii HOM05D000030 ORTHO05D000009 4.2e-06 54.7 44 50.0
HanXRQChr11g0320981 Helianthus annuus HOM05D000030 ORTHO05D000031 4.2e-06 54.7 54 48.1
Rhsim09G0079000 Rhododendron simsii HOM05D000030 ORTHO05D000031 4.2e-06 54.7 62 41.9
Hund25665 Selenicereus undatus HOM05D000030 ORTHO05D000009 4.2e-06 54.7 77 36.4
Sopen12g016160 Solanum pennellii HOM05D000030 ORTHO05D000009 4.2e-06 54.7 79 36.7
Ah.00g238000 Amaranthus hybridus HOM05D000030 ORTHO05D000009 5.5e-06 54.3 60 45.0
EL10Ac4g08611 Beta vulgaris HOM05D000030 ORTHO05D000031 5.5e-06 54.3 70 40.0
AUR62036581 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.5e-06 54.3 81 37.0
AUR62042057 Chenopodium quinoa HOM05D000030 ORTHO05D000031 5.5e-06 54.3 62 41.9
Dinv10810 Davidia involucrata HOM05D000030 ORTHO05D000009 5.5e-06 54.3 44 54.5
ECA236G3604 Erigeron canadensis HOM05D000030 ORTHO05D000009 5.5e-06 54.3 46 52.2
Gorai.001G220000 Gossypium raimondii HOM05D000030 ORTHO05D000009 5.5e-06 54.3 44 50.0
Hma1.2p1_0034F.1_g021450 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 5.5e-06 54.3 44 59.1
Hma1.2p1_0739F.1_g211320 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 5.5e-06 54.3 73 41.1
Oeu013771.1 Olea europaea HOM05D000030 ORTHO05D000031 5.5e-06 54.3 53 43.4
Oeu024962.1 Olea europaea HOM05D000030 ORTHO05D000031 5.5e-06 54.3 51 45.1
QL10p023376 Quercus lobata HOM05D000030 ORTHO05D000031 5.5e-06 54.3 77 39.0
Rhsim02G0147200 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.5e-06 54.3 61 41.0
Rhsim05G0082600 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.5e-06 54.3 62 41.9
Rhsim10G0102100 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.5e-06 54.3 62 40.3
Hund11149 Selenicereus undatus HOM05D000030 ORTHO05D000009 5.5e-06 54.3 77 36.4
EL10Ac1g01885 Beta vulgaris HOM05D000030 ORTHO05D000009 7.2e-06 53.9 68 36.8
AUR62000142 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62002560 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62006598 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62012422 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62014738 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62017683 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62017966 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62018187 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62018935 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62019475 Chenopodium quinoa HOM05D000030 ORTHO05D000031 7.2e-06 53.9 62 41.9
AUR62019998 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62020622 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62026701 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62026734 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62027789 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62027814 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62028492 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62028817 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62029345 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62031214 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62031999 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62032289 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62032755 Chenopodium quinoa HOM05D000030 ORTHO05D000031 7.2e-06 53.9 62 41.9
AUR62033599 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62035291 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62036588 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62036613 Chenopodium quinoa HOM05D000054 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62038277 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62038809 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62039894 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62041945 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62041981 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62042839 Chenopodium quinoa HOM05D000030 ORTHO05D000031 7.2e-06 53.9 62 41.9
AUR62043186 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
AUR62044371 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-06 53.9 62 41.9
FvH4_1g09251 Fragaria vesca HOM05D000030 ORTHO05D000031 7.2e-06 53.9 68 36.8
Hma1.2p1_0968F.1_g242500 Hydrangea macrophylla HOM05D000030 ORTHO05D000031 7.2e-06 53.9 86 38.4
MBI15_g10001_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000009 7.2e-06 53.9 44 52.3
Oeu018461.1 Olea europaea HOM05D000030 ORTHO05D000031 7.2e-06 53.9 70 35.7
QL11p031591 Quercus lobata HOM05D000030 ORTHO05D000009 7.2e-06 53.9 59 40.7
Rhsim04G0130100 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.2e-06 53.9 78 37.2
TPR.G30629 Trifolium pratense HOM05D000030 ORTHO05D000031 7.2e-06 53.9 49 49.0
Ah.08g220270 Amaranthus hybridus HOM05D000030 ORTHO05D000031 9.4e-06 53.5 44 54.5
EL10Ac4g08877 Beta vulgaris HOM05D000030 ORTHO05D000031 9.4e-06 53.5 84 33.3
AUR62040352 Chenopodium quinoa HOM05D000030 ORTHO05D000031 9.4e-06 53.5 62 41.9
Duzib128G1005 Durio zibethinus HOM05D000030 ORTHO05D000009 9.4e-06 53.5 75 38.7
ECA234G3927 Erigeron canadensis HOM05D000030 ORTHO05D000009 9.4e-06 53.5 76 39.5
ECA240G3204 Erigeron canadensis HOM05D000030 ORTHO05D000009 9.4e-06 53.5 76 39.5
MD01G1147100 Malus domestica HOM05D000030 ORTHO05D000031 9.4e-06 53.5 46 47.8
PSO339G1343 Papaver somniferum HOM05D000030 ORTHO05D000031 9.4e-06 53.5 83 39.8
Rhsim03G0071200 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.4e-06 53.5 62 41.9
Rhsim05G0158300 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.4e-06 53.5 62 41.9
Rhsim09G0124200 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.4e-06 53.5 76 36.8
Rhsim12G0047200 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.4e-06 53.5 62 41.9
RhsimUnG0051800 Rhododendron simsii HOM05D000030 ORTHO05D000031 9.4e-06 53.5 62 41.9
Hund02312 Selenicereus undatus HOM05D000030 ORTHO05D000009 9.4e-06 53.5 77 37.7
Hund14671 Selenicereus undatus HOM05D000030 ORTHO05D000009 9.4e-06 53.5 77 36.4


User provided reference genes

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