Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p038324 Quercus lobata HOM05D007235 ORTHO05D008985 1.1e-138 496.5 237 100.0
QL07p038338 Quercus lobata HOM05D007235 ORTHO05D008985 2.8e-121 438.7 235 87.7
Cfa016637 Carpinus fangiana HOM05D007235 ORTHO05D008985 1.2e-100 370.2 228 77.6
CiPaw.10G011900 Carya illinoinensis HOM05D007235 ORTHO05D008985 8.7e-99 364.0 226 75.7
Haze_19643 Corylus avellana HOM05D007235 ORTHO05D008985 3.7e-97 358.6 232 73.7
Prupe.7G102400 Prunus persica HOM05D007235 ORTHO05D008985 1.0e-94 350.5 235 73.2
Haze_19642 Corylus avellana HOM05D007235 ORTHO05D008985 1.3e-94 350.1 214 77.6
Potri.006G210325 Populus trichocarpa HOM05D007235 ORTHO05D008985 8.5e-94 347.4 229 70.3
GSVIVG01033880001 Vitis vinifera HOM05D007235 ORTHO05D008985 8.5e-94 347.4 238 69.7
Sed0026179 Sechium edule HOM05D007235 ORTHO05D008985 5.5e-93 344.7 235 69.8
Ciclev10011029m.g Citrus clementina HOM05D007235 ORTHO05D008985 1.0e-91 340.5 232 69.4
Atru.chr8.1457 Acer truncatum HOM05D007235 ORTHO05D008985 2.3e-91 339.3 234 67.9
MELO3C024556.2 Cucumis melo HOM05D007235 ORTHO05D008985 3.9e-91 338.6 236 69.5
TAR623G1371 Trochodendron aralioides HOM05D007235 ORTHO05D008985 3.9e-91 338.6 233 69.5
ClCG04G010150 Citrullus lanatus HOM05D007235 ORTHO05D008985 8.8e-91 337.4 235 68.1
Dinv31713 Davidia involucrata HOM05D007235 ORTHO05D008985 8.8e-91 337.4 236 69.1
CsaV3_6G040770 Cucumis sativus L. HOM05D007235 ORTHO05D008985 2.0e-90 336.3 236 68.6
Dinv31712 Davidia involucrata HOM05D007235 ORTHO05D008985 2.0e-90 336.3 236 68.2
MD12G1029200 Malus domestica HOM05D007235 ORTHO05D008985 3.3e-90 335.5 235 69.8
Cfa021070 Carpinus fangiana HOM05D007235 ORTHO05D008985 4.3e-90 335.1 198 79.3
Duzib106G1334 Durio zibethinus HOM05D007235 ORTHO05D008985 4.3e-90 335.1 236 69.9
Rhsim03G0070500 Rhododendron simsii HOM05D007235 ORTHO05D008985 1.3e-89 333.6 229 69.0
FAN02G2734 Fragaria x ananassa HOM05D007235 ORTHO05D008985 1.7e-89 333.2 231 71.0
Duzib093G1209 Durio zibethinus HOM05D007235 ORTHO05D008985 2.2e-89 332.8 235 68.9
FvH4_6g19350 Fragaria vesca HOM05D007235 ORTHO05D008985 2.8e-89 332.4 233 70.0
FvH4_6g19352 Fragaria vesca HOM05D007235 ORTHO05D008985 2.8e-89 332.4 236 69.5
FAN14G5756 Fragaria x ananassa HOM05D007235 ORTHO05D008985 2.8e-89 332.4 233 70.0
Potri.006G210150 Populus trichocarpa HOM05D007235 ORTHO05D008985 2.8e-89 332.4 220 70.5
TAR623G0688 Trochodendron aralioides HOM05D007235 ORTHO05D008985 6.3e-89 331.3 229 66.8
Manes.09G053100 Manihot esculenta HOM05D007235 ORTHO05D008985 1.4e-88 330.1 235 67.2
Atru.chr8.1458 Acer truncatum HOM05D007235 ORTHO05D008985 1.8e-88 329.7 234 66.7
FAN14G3457 Fragaria x ananassa HOM05D007235 ORTHO05D008985 2.4e-88 329.3 236 69.1
CSS0010120 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 4.1e-88 328.6 229 69.9
FAN02G0370 Fragaria x ananassa HOM05D007235 ORTHO05D008985 4.1e-88 328.6 236 68.6
RcHm_v2.0_Chr3g0474611 Rosa chinensis HOM05D007235 ORTHO05D008985 1.5e-87 326.6 236 68.6
Gorai.002G238500 Gossypium raimondii HOM05D007235 ORTHO05D008985 3.4e-87 325.5 223 70.0
CSS0012377 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 4.5e-87 325.1 236 66.1
Sabra06G0161900 Salix brachista HOM05D007235 ORTHO05D008985 4.5e-87 325.1 229 67.2
Actinidia05406 Actinidia chinensis HOM05D007235 ORTHO05D008985 1.0e-86 323.9 235 67.7
Rhsim03G0072800 Rhododendron simsii HOM05D007235 ORTHO05D008985 1.0e-86 323.9 226 68.1
SalBow3G3787 Salvia bowleyana HOM05D007235 ORTHO05D008985 2.2e-86 322.8 240 65.0
Migut.J01009 Erythranthe guttata HOM05D007235 ORTHO05D008985 2.9e-86 322.4 231 65.4
CSS0040083 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 3.8e-86 322.0 236 65.7
MD10G1176100 Malus domestica HOM05D007235 ORTHO05D008985 5.0e-86 321.6 240 67.5
TWI74G0874 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 5.0e-86 321.6 234 64.5
Lj2C141T11 Lonicera japonica HOM05D007235 ORTHO05D008985 6.5e-86 321.2 232 66.8
Rhsim03G0070400 Rhododendron simsii HOM05D007235 ORTHO05D008985 6.5e-86 321.2 230 66.5
RcHm_v2.0_Chr3g0474651 Rosa chinensis HOM05D007235 ORTHO05D008985 6.5e-86 321.2 236 67.4
COL.COLO4_29682 Corchorus olitorius HOM05D007235 ORTHO05D008985 8.5e-86 320.9 213 70.9
Lj7A625G73 Lonicera japonica HOM05D007235 ORTHO05D008985 8.5e-86 320.9 218 70.6
Gohir.A01G204950 Gossypium hirsutum HOM05D007235 ORTHO05D008985 6.1e-84 314.7 223 68.2
TWI74G1128 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 6.1e-84 314.7 234 62.4
RcHm_v2.0_Chr3g0474591 Rosa chinensis HOM05D007235 ORTHO05D008985 2.3e-83 312.8 202 73.3
DCAR_013408 Daucus carota HOM05D007235 ORTHO05D008985 3.0e-83 312.4 228 64.0
SalBow3G1230 Salvia bowleyana HOM05D007235 ORTHO05D008985 6.7e-83 311.2 236 61.9
Prupe.8G215200 Prunus persica HOM05D007235 ORTHO05D008985 3.3e-82 308.9 241 65.1
Aqoxy2G01076 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 5.7e-82 308.1 232 62.1
Migut.J01008 Erythranthe guttata HOM05D007235 ORTHO05D008985 1.3e-81 307.0 237 63.7
Lsat_1_v5_gn_9_21080 Lactuca sativa HOM05D007235 ORTHO05D008985 2.0e-79 299.7 234 62.8
Aqoxy2G01078 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 7.7e-79 297.7 230 60.9
DCAR_007760 Daucus carota HOM05D007235 ORTHO05D008985 3.8e-78 295.4 237 60.8
Cc06_g21890 Coffea canephora HOM05D007235 ORTHO05D008985 6.5e-78 294.7 211 64.5
Aqoxy2G01105 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 3.2e-77 292.4 233 59.2
Cc06_g21800 Coffea canephora HOM05D007235 ORTHO05D008985 4.2e-77 292.0 244 58.2
PSO801G0111 Papaver somniferum HOM05D007235 ORTHO05D008985 2.1e-76 289.7 232 64.2
MBI17_g35889_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 5.2e-75 285.0 227 60.8
PSO801G0535 Papaver somniferum HOM05D007235 ORTHO05D008985 4.4e-74 282.0 235 60.0
PSO339G1765 Papaver somniferum HOM05D007235 ORTHO05D008985 6.3e-73 278.1 182 71.4
SEGI_15434 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 7.0e-72 274.6 238 56.7
SEGI_22450 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 7.7e-71 271.2 204 62.3
HPP92_006812 Vanilla planifolia HOM05D007235 ORTHO05D008985 2.2e-70 269.6 224 55.4
ATR0820G239 Amborella trichopoda HOM05D007235 ORTHO05D008985 2.9e-70 269.2 230 58.7
MBI17_g41037_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 5.5e-69 265.0 182 68.7
Gohir.D01G194350 Gossypium hirsutum HOM05D007235 ORTHO05D008985 7.2e-61 238.0 138 78.3
COL.COLO4_29684 Corchorus olitorius HOM05D002712 ORTHO05D007713 3.6e-52 209.1 138 73.2
AagrBONN_evm.TU.Sc2ySwM_228.2009 Anthoceros agrestis HOM05D007235 ORTHO05D008985 1.0e-46 191.0 175 52.0
Mapoly0090s0057 Marchantia polymorpha HOM05D007235 ORTHO05D008985 2.5e-37 159.8 200 41.5
MD14G1029500 Malus domestica HOM05D007235 ORTHO05D008985 1.1e-16 91.3 61 72.1


User provided reference genes

Program Settings